| Literature DB >> 29250379 |
Saray Argibay-Otero1, Rosa Carballo1, Ezequiel M Vázquez-López1.
Abstract
The asymmetric unit of the title compound, [ReCl(C5H5NO)2(CO)3]·C5H5NO, contains one mol-ecule of the complex fac-[ReCl(4-pyOH)2(CO)3] (where 4-pyOH represents 4-hy-droxy-pyridine) and one mol-ecule of pyridin-4(1H)-one (4-HpyO). In the mol-ecule of the complex, the Re atom is coordinated to two N atoms of the two 4-pyOH ligands, three carbonyl C atoms, in a facial configuration, and the Cl atom. The resulting geometry is slightly distorted octa-hedral. In the crystal structure, both fragments are associated by hydrogen bonds; two 4-HpyO mol-ecules bridge between two mol-ecules of the complex using the O=C group as acceptor for two different HO- groups of coordinated 4-pyOH from two neighbouring metal complexes. The resulting square arrangements are extented into infinite chains by hydrogen bonds involving the N-H groups of the 4-HpyO mol-ecule and the chloride ligands. The chains are further stabilized by π-stacking inter-actions.Entities:
Keywords: 4-hydroxypyridine; crystal structure; pyridin-4(1H)-one; rhenium(I) compounds
Year: 2017 PMID: 29250379 PMCID: PMC5730316 DOI: 10.1107/S2056989017013512
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of the title compound, with displacement ellipsoids drawn at the 50% probability level.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯O3 | 0.94 (8) | 1.62 (8) | 2.556 (5) | 175 (7) |
| O2—H2⋯O3i | 1.01 (7) | 1.57 (7) | 2.569 (5) | 169 (6) |
| N3—H3 | 0.97 (7) | 2.32 (7) | 3.218 (5) | 152 (5) |
| C9—H9⋯O22iii | 0.95 | 2.56 | 3.317 (7) | 137 |
| C3—H3⋯Cl1iv | 0.95 | 2.89 | 3.580 (5) | 131 |
| C14—H14⋯O21v | 0.95 | 2.62 | 3.264 (7) | 126 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .
Figure 2Representation of the formation of chains by hydrogen-bonding and π-stacking in the crystal structure.
Figure 3Association of the chains and formation of the empty channels in the crystal structure.
Experimental details
| Crystal data | |
| Chemical formula | [ReCl(C5H5NO)2(CO)3]·C5H5NO |
|
| 590.98 |
| Crystal system, space group | Triclinic, |
| Temperature (K) | 100 |
|
| 7.5235 (13), 11.717 (2), 13.644 (2) |
| α, β, γ (°) | 66.694 (4), 78.757 (4), 81.374 (4) |
|
| 1079.9 (3) |
|
| 2 |
| Radiation type | Mo |
| μ (mm−1) | 5.79 |
| Crystal size (mm) | 0.36 × 0.35 × 0.04 |
| Data collection | |
| Diffractometer | Bruker D8 Venture Photon 100 CMOS |
| Absorption correction | Multi-scan ( |
|
| 0.352, 0.647 |
| No. of measured, independent and observed [ | 28225, 4476, 4312 |
|
| 0.041 |
| (sin θ/λ)max (Å−1) | 0.630 |
| Refinement | |
|
| 0.029, 0.077, 1.35 |
| No. of reflections | 4476 |
| No. of parameters | 272 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 1.63, −1.03 |
Computer programs: APEX3 (Bruker, 2014 ▸), SAINT (Bruker, 2014 ▸), SHELXS2013 (Sheldrick, 2015a ▸), SHELXL2013 (Sheldrick, 2015b ▸).
| [ReCl(C5H5NO)2(CO)3]·C5H5NO | |
| Triclinic, | Melting point: 145 K |
| Mo | |
| Cell parameters from 9858 reflections | |
| θ = 3.3–26.6° | |
| α = 66.694 (4)° | µ = 5.79 mm−1 |
| β = 78.757 (4)° | |
| γ = 81.374 (4)° | Plate, yellow |
| 0.36 × 0.35 × 0.04 mm | |
| Bruker D8 Venture Photon 100 CMOS diffractometer | 4312 reflections with |
| φ and ω scans | |
| Absorption correction: multi-scan (SADABS; Krause | θmax = 26.6°, θmin = 2.8° |
| 28225 measured reflections | |
| 4476 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 4476 reflections | Δρmax = 1.63 e Å−3 |
| 272 parameters | Δρmin = −1.03 e Å−3 |
| 0 restraints | Extinction correction: SHELXL2013 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0119 (9) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Re1 | 0.86373 (2) | 0.70746 (2) | 0.07222 (2) | 0.01123 (10) | |
| Cl1 | 1.09377 (15) | 0.82393 (10) | 0.09609 (9) | 0.0135 (2) | |
| O1 | 0.3391 (5) | 0.8384 (4) | 0.4444 (3) | 0.0208 (8) | |
| H1 | 0.394 (10) | 0.843 (6) | 0.499 (6) | 0.031* | |
| O2 | 1.1814 (5) | 0.2036 (3) | 0.4087 (3) | 0.0229 (8) | |
| O3 | 0.4725 (5) | 0.8444 (3) | 0.6006 (3) | 0.0203 (8) | |
| H2 | 1.319 (10) | 0.196 (6) | 0.399 (6) | 0.030* | |
| O20 | 1.1184 (5) | 0.6629 (4) | −0.1173 (3) | 0.0232 (8) | |
| O21 | 0.6852 (5) | 0.9364 (4) | −0.0929 (3) | 0.0243 (8) | |
| O22 | 0.5800 (6) | 0.5598 (4) | 0.0526 (4) | 0.0299 (9) | |
| N1 | 0.6881 (5) | 0.7397 (4) | 0.2102 (3) | 0.0129 (8) | |
| N2 | 0.9814 (5) | 0.5408 (4) | 0.1954 (3) | 0.0138 (8) | |
| N3 | 0.1310 (6) | 0.9766 (4) | 0.8090 (4) | 0.0225 (9) | |
| H3A | 0.056 (9) | 1.011 (6) | 0.859 (6) | 0.027* | |
| C1 | 0.4552 (7) | 0.8016 (4) | 0.3733 (4) | 0.0154 (9) | |
| C2 | 0.3875 (7) | 0.7932 (5) | 0.2880 (4) | 0.0165 (10) | |
| H2A | 0.2607 | 0.8072 | 0.2848 | 0.020* | |
| C3 | 0.5057 (7) | 0.7646 (4) | 0.2088 (4) | 0.0151 (9) | |
| H3 | 0.4577 | 0.7621 | 0.1503 | 0.018* | |
| C4 | 0.7506 (7) | 0.7409 (4) | 0.2958 (4) | 0.0140 (9) | |
| H4 | 0.8767 | 0.7204 | 0.3000 | 0.017* | |
| C5 | 0.6415 (7) | 0.7705 (5) | 0.3779 (4) | 0.0166 (10) | |
| H5 | 0.6922 | 0.7697 | 0.4368 | 0.020* | |
| C6 | 1.1246 (7) | 0.3148 (4) | 0.3390 (4) | 0.0169 (10) | |
| C7 | 0.9392 (7) | 0.3537 (5) | 0.3529 (4) | 0.0187 (10) | |
| H7 | 0.8585 | 0.3038 | 0.4120 | 0.022* | |
| C8 | 0.8757 (7) | 0.4642 (4) | 0.2803 (4) | 0.0149 (9) | |
| H8 | 0.7493 | 0.4884 | 0.2904 | 0.018* | |
| C9 | 1.1622 (7) | 0.5051 (5) | 0.1839 (4) | 0.0170 (10) | |
| H9 | 1.2407 | 0.5590 | 0.1264 | 0.020* | |
| C10 | 1.2371 (7) | 0.3934 (5) | 0.2526 (4) | 0.0191 (10) | |
| H10 | 1.3638 | 0.3706 | 0.2408 | 0.023* | |
| C11 | 0.3637 (7) | 0.8866 (4) | 0.6664 (4) | 0.0159 (9) | |
| C12 | 0.1806 (7) | 0.9321 (5) | 0.6507 (4) | 0.0192 (10) | |
| H12 | 0.1357 | 0.9326 | 0.5901 | 0.023* | |
| C13 | 0.0699 (7) | 0.9751 (5) | 0.7227 (4) | 0.0206 (10) | |
| H13 | −0.0523 | 1.0045 | 0.7120 | 0.025* | |
| C14 | 0.3048 (8) | 0.9366 (5) | 0.8259 (4) | 0.0202 (10) | |
| H14 | 0.3458 | 0.9412 | 0.8857 | 0.024* | |
| C15 | 0.4216 (6) | 0.8902 (4) | 0.7590 (4) | 0.0149 (9) | |
| H15 | 0.5419 | 0.8601 | 0.7736 | 0.018* | |
| C20 | 1.0245 (7) | 0.6793 (4) | −0.0466 (4) | 0.0175 (10) | |
| C21 | 0.7553 (6) | 0.8525 (4) | −0.0305 (4) | 0.0148 (9) | |
| C22 | 0.6898 (7) | 0.6144 (5) | 0.0594 (4) | 0.0197 (10) |
| Re1 | 0.01149 (13) | 0.01337 (13) | 0.01111 (13) | 0.00016 (7) | −0.00161 (7) | −0.00747 (8) |
| Cl1 | 0.0141 (5) | 0.0153 (5) | 0.0144 (5) | −0.0007 (4) | −0.0023 (4) | −0.0091 (4) |
| O1 | 0.0169 (18) | 0.032 (2) | 0.0186 (18) | 0.0003 (15) | 0.0016 (15) | −0.0177 (16) |
| O2 | 0.024 (2) | 0.0183 (18) | 0.0187 (18) | 0.0032 (15) | −0.0025 (15) | −0.0015 (15) |
| O3 | 0.0179 (18) | 0.0264 (19) | 0.0191 (18) | 0.0058 (15) | −0.0019 (14) | −0.0144 (15) |
| O20 | 0.026 (2) | 0.0278 (19) | 0.0184 (18) | −0.0017 (16) | 0.0063 (16) | −0.0159 (16) |
| O21 | 0.025 (2) | 0.0226 (19) | 0.0214 (19) | 0.0016 (16) | −0.0089 (16) | −0.0037 (16) |
| O22 | 0.024 (2) | 0.037 (2) | 0.040 (2) | −0.0070 (17) | −0.0022 (18) | −0.026 (2) |
| N1 | 0.0115 (19) | 0.0162 (19) | 0.0112 (18) | 0.0018 (15) | 0.0003 (15) | −0.0072 (15) |
| N2 | 0.0117 (19) | 0.0133 (18) | 0.016 (2) | −0.0008 (15) | 0.0001 (16) | −0.0066 (16) |
| N3 | 0.024 (2) | 0.020 (2) | 0.023 (2) | −0.0028 (18) | 0.0078 (19) | −0.0120 (18) |
| C1 | 0.014 (2) | 0.017 (2) | 0.015 (2) | −0.0020 (18) | 0.0015 (18) | −0.0073 (18) |
| C2 | 0.016 (2) | 0.020 (2) | 0.017 (2) | 0.0035 (18) | −0.0061 (19) | −0.0097 (19) |
| C3 | 0.015 (2) | 0.017 (2) | 0.016 (2) | −0.0007 (18) | −0.0037 (18) | −0.0090 (19) |
| C4 | 0.017 (2) | 0.016 (2) | 0.012 (2) | 0.0009 (18) | −0.0043 (18) | −0.0074 (18) |
| C5 | 0.018 (2) | 0.019 (2) | 0.016 (2) | −0.0022 (19) | −0.0033 (19) | −0.0102 (19) |
| C6 | 0.020 (2) | 0.014 (2) | 0.017 (2) | 0.0006 (18) | −0.0036 (19) | −0.0059 (19) |
| C7 | 0.019 (2) | 0.016 (2) | 0.017 (2) | 0.0008 (19) | 0.002 (2) | −0.0053 (19) |
| C8 | 0.013 (2) | 0.018 (2) | 0.015 (2) | −0.0006 (18) | 0.0007 (18) | −0.0089 (19) |
| C9 | 0.015 (2) | 0.020 (2) | 0.016 (2) | −0.0006 (18) | −0.0006 (19) | −0.0077 (19) |
| C10 | 0.015 (2) | 0.021 (2) | 0.020 (2) | 0.0025 (19) | −0.002 (2) | −0.008 (2) |
| C11 | 0.021 (2) | 0.014 (2) | 0.013 (2) | 0.0001 (18) | −0.0003 (19) | −0.0074 (18) |
| C12 | 0.022 (3) | 0.019 (2) | 0.017 (2) | 0.005 (2) | −0.005 (2) | −0.009 (2) |
| C13 | 0.018 (2) | 0.018 (2) | 0.027 (3) | 0.0001 (19) | −0.001 (2) | −0.012 (2) |
| C14 | 0.027 (3) | 0.021 (2) | 0.017 (2) | −0.007 (2) | 0.000 (2) | −0.011 (2) |
| C15 | 0.011 (2) | 0.016 (2) | 0.022 (2) | −0.0007 (17) | −0.0068 (19) | −0.0106 (19) |
| C20 | 0.021 (3) | 0.011 (2) | 0.024 (3) | 0.0000 (18) | −0.008 (2) | −0.0085 (19) |
| C21 | 0.010 (2) | 0.019 (2) | 0.017 (2) | −0.0061 (18) | 0.0021 (18) | −0.0086 (19) |
| C22 | 0.014 (2) | 0.027 (3) | 0.016 (2) | 0.005 (2) | 0.0001 (19) | −0.011 (2) |
| Re1—C22 | 1.898 (6) | C2—C3 | 1.376 (7) |
| Re1—C21 | 1.914 (5) | C2—H2A | 0.9500 |
| Re1—C20 | 1.933 (5) | C3—H3 | 0.9500 |
| Re1—N1 | 2.208 (4) | C4—C5 | 1.383 (7) |
| Re1—N2 | 2.210 (4) | C4—H4 | 0.9500 |
| Re1—Cl1 | 2.4987 (11) | C5—H5 | 0.9500 |
| O1—C1 | 1.333 (6) | C6—C10 | 1.393 (7) |
| O1—H1 | 0.94 (8) | C6—C7 | 1.401 (7) |
| O2—C6 | 1.341 (6) | C7—C8 | 1.367 (7) |
| O2—H2 | 1.01 (7) | C7—H7 | 0.9500 |
| O3—C11 | 1.289 (6) | C8—H8 | 0.9500 |
| O20—C20 | 1.143 (7) | C9—C10 | 1.387 (7) |
| O21—C21 | 1.151 (6) | C9—H9 | 0.9500 |
| O22—C22 | 1.155 (7) | C10—H10 | 0.9500 |
| N1—C4 | 1.348 (6) | C11—C12 | 1.426 (7) |
| N1—C3 | 1.362 (6) | C11—C15 | 1.433 (7) |
| N2—C8 | 1.346 (6) | C12—C13 | 1.363 (7) |
| N2—C9 | 1.360 (6) | C12—H12 | 0.9500 |
| N3—C13 | 1.353 (7) | C13—H13 | 0.9500 |
| N3—C14 | 1.353 (7) | C14—C15 | 1.355 (7) |
| N3—H3A | 0.97 (7) | C14—H14 | 0.9500 |
| C1—C2 | 1.401 (7) | C15—H15 | 0.9500 |
| C1—C5 | 1.402 (7) | ||
| C22—Re1—C21 | 87.9 (2) | C5—C4—H4 | 118.2 |
| C22—Re1—C20 | 89.6 (2) | C4—C5—C1 | 119.2 (4) |
| C21—Re1—C20 | 88.6 (2) | C4—C5—H5 | 120.4 |
| C22—Re1—N1 | 91.96 (19) | C1—C5—H5 | 120.4 |
| C21—Re1—N1 | 92.49 (18) | O2—C6—C10 | 124.3 (5) |
| C20—Re1—N1 | 178.11 (17) | O2—C6—C7 | 117.8 (5) |
| C22—Re1—N2 | 91.80 (19) | C10—C6—C7 | 117.8 (4) |
| C21—Re1—N2 | 177.97 (17) | C8—C7—C6 | 119.2 (5) |
| C20—Re1—N2 | 93.45 (18) | C8—C7—H7 | 120.4 |
| N1—Re1—N2 | 85.51 (15) | C6—C7—H7 | 120.4 |
| C22—Re1—Cl1 | 177.81 (16) | N2—C8—C7 | 124.0 (5) |
| C21—Re1—Cl1 | 94.05 (14) | N2—C8—H8 | 118.0 |
| C20—Re1—Cl1 | 91.33 (15) | C7—C8—H8 | 118.0 |
| N1—Re1—Cl1 | 87.03 (11) | N2—C9—C10 | 122.8 (5) |
| N2—Re1—Cl1 | 86.19 (11) | N2—C9—H9 | 118.6 |
| C1—O1—H1 | 113 (4) | C10—C9—H9 | 118.6 |
| C6—O2—H2 | 109 (4) | C9—C10—C6 | 119.2 (5) |
| C4—N1—C3 | 116.7 (4) | C9—C10—H10 | 120.4 |
| C4—N1—Re1 | 124.0 (3) | C6—C10—H10 | 120.4 |
| C3—N1—Re1 | 119.2 (3) | O3—C11—C12 | 122.0 (5) |
| C8—N2—C9 | 116.8 (4) | O3—C11—C15 | 121.4 (5) |
| C8—N2—Re1 | 121.6 (3) | C12—C11—C15 | 116.6 (4) |
| C9—N2—Re1 | 121.4 (3) | C13—C12—C11 | 120.0 (5) |
| C13—N3—C14 | 120.9 (5) | C13—C12—H12 | 120.0 |
| C13—N3—H3A | 123 (4) | C11—C12—H12 | 120.0 |
| C14—N3—H3A | 116 (4) | N3—C13—C12 | 121.1 (5) |
| O1—C1—C2 | 118.1 (4) | N3—C13—H13 | 119.4 |
| O1—C1—C5 | 124.5 (5) | C12—C13—H13 | 119.4 |
| C2—C1—C5 | 117.4 (4) | N3—C14—C15 | 121.3 (5) |
| C3—C2—C1 | 119.6 (5) | N3—C14—H14 | 119.4 |
| C3—C2—H2A | 120.2 | C15—C14—H14 | 119.4 |
| C1—C2—H2A | 120.2 | C14—C15—C11 | 120.0 (5) |
| N1—C3—C2 | 123.2 (4) | C14—C15—H15 | 120.0 |
| N1—C3—H3 | 118.4 | C11—C15—H15 | 120.0 |
| C2—C3—H3 | 118.4 | O20—C20—Re1 | 179.5 (4) |
| N1—C4—C5 | 123.7 (5) | O21—C21—Re1 | 177.0 (4) |
| N1—C4—H4 | 118.2 | O22—C22—Re1 | 178.1 (4) |
| H··· | ||||
| O1—H1···O3 | 0.94 (8) | 1.62 (8) | 2.556 (5) | 175 (7) |
| O2—H2···O3i | 1.01 (7) | 1.57 (7) | 2.569 (5) | 169 (6) |
| N3—H3 | 0.97 (7) | 2.32 (7) | 3.218 (5) | 152 (5) |
| C9—H9···O22iii | 0.95 | 2.56 | 3.317 (7) | 137 |
| C3—H3···Cl1iv | 0.95 | 2.89 | 3.580 (5) | 131 |
| C14—H14···O21v | 0.95 | 2.62 | 3.264 (7) | 126 |