Literature DB >> 29247847

Transcriptome sequence-based phylogeny of chalcidoid wasps (Hymenoptera: Chalcidoidea) reveals a history of rapid radiations, convergence, and evolutionary success.

Ralph S Peters1, Oliver Niehuis2, Simon Gunkel3, Marcel Bläser4, Christoph Mayer5, Lars Podsiadlowski6, Alexey Kozlov7, Alexander Donath5, Simon van Noort8, Shanlin Liu9, Xin Zhou10, Bernhard Misof5, John Heraty11, Lars Krogmann12.   

Abstract

Chalcidoidea are a megadiverse group of mostly parasitoid wasps of major ecological and economical importance that are omnipresent in almost all extant terrestrial habitats. The timing and pattern of chalcidoid diversification is so far poorly understood and has left many important questions on the evolutionary history of Chalcidoidea unanswered. In this study, we infer the early divergence events within Chalcidoidea and address the question of whether or not ancestral chalcidoids were small egg parasitoids. We also trace the evolution of some key traits: jumping ability, development of enlarged hind femora, and associations with figs. Our phylogenetic inference is based on the analysis of 3,239 single-copy genes across 48 chalcidoid wasps and outgroups representatives. We applied an innovative a posteriori evaluation approach to molecular clock-dating based on nine carefully validated fossils, resulting in the first molecular clock-based estimation of deep Chalcidoidea divergence times. Our results suggest a late Jurassic origin of Chalcidoidea, with a first divergence of morphologically and biologically distinct groups in the early to mid Cretaceous, between 129 and 81 million years ago (mya). Diversification of most extant lineages happened rapidly after the Cretaceous in the early Paleogene, between 75 and 53 mya. The inferred Chalcidoidea tree suggests a transition from ancestral minute egg parasitoids to larger-bodied parasitoids of other host stages during the early history of chalcidoid evolution. The ability to jump evolved independently at least three times, namely in Eupelmidae, Encyrtidae, and Tanaostigmatidae. Furthermore, the large-bodied strongly sclerotized species with enlarged hind femora in Chalcididae and Leucospidae are not closely related. Finally, the close association of some chalcidoid wasps with figs, either as pollinators, or as inquilines/gallers or as parasitoids, likely evolved at least twice independently: in the Eocene, giving rise to fig pollinators, and in the Oligocene or Miocene, resulting in non-pollinating fig-wasps, including gallers and parasitoids. The origins of very speciose lineages (e.g., Mymaridae, Eulophidae, Pteromalinae) are evenly spread across the period of chalcidoid evolution from early Cretaceous to the late Eocene. Several shifts in biology and morphology (e.g., in host exploitation, body shape and size, life history), each followed by rapid radiations, have likely enabled the evolutionary success of Chalcidoidea.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Phylogenomics; biological shifts; egg parasitoids; evolution; fig wasps; parasitoid wasps

Mesh:

Substances:

Year:  2017        PMID: 29247847     DOI: 10.1016/j.ympev.2017.12.005

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  21 in total

1.  Tiny wasps, huge diversity - A review of German Pteromalidae with new generic and species records (Hymenoptera: Chalcidoidea).

Authors:  Michael Haas; Hannes Baur; Tanja Schweizer; Juan Carlos Monje; Marina Moser; Sonia Bigalk; Lars Krogmann
Journal:  Biodivers Data J       Date:  2021-12-07

2.  Fast and accurate bootstrap confidence limits on genome-scale phylogenies using little bootstraps.

Authors:  Sudip Sharma; Sudhir Kumar
Journal:  Nat Comput Sci       Date:  2021-09-22

3.  A new lineage of Cretaceous jewel wasps (Chalcidoidea: Diversinitidae).

Authors:  Michael Haas; Roger A Burks; Lars Krogmann
Journal:  PeerJ       Date:  2018-04-16       Impact factor: 2.984

4.  No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods.

Authors:  Alexander Brandt; Jens Bast; Stefan Scheu; Karen Meusemann; Alexander Donath; Kai Schütte; Ryuichiro Machida; Ken Kraaijeveld
Journal:  Sci Rep       Date:  2019-03-29       Impact factor: 4.379

5.  Sex biased expression and co-expression networks in development, using the hymenopteran Nasonia vitripennis.

Authors:  Alfredo Rago; John H Werren; John K Colbourne
Journal:  PLoS Genet       Date:  2020-01-27       Impact factor: 5.917

6.  Comprehensive phylogenomic analyses re-write the evolution of parasitism within cynipoid wasps.

Authors:  Bonnie B Blaimer; Dietrich Gotzek; Seán G Brady; Matthew L Buffington
Journal:  BMC Evol Biol       Date:  2020-11-23       Impact factor: 3.260

7.  Comparative genomics of the miniature wasp and pest control agent Trichogramma pretiosum.

Authors:  Amelia R I Lindsey; Yogeshwar D Kelkar; Xin Wu; Dan Sun; Ellen O Martinson; Zhichao Yan; Paul F Rugman-Jones; Daniel S T Hughes; Shwetha C Murali; Jiaxin Qu; Shannon Dugan; Sandra L Lee; Hsu Chao; Huyen Dinh; Yi Han; Harsha Vardhan Doddapaneni; Kim C Worley; Donna M Muzny; Gongyin Ye; Richard A Gibbs; Stephen Richards; Soojin V Yi; Richard Stouthamer; John H Werren
Journal:  BMC Biol       Date:  2018-05-18       Impact factor: 7.431

8.  Gene content evolution in the arthropods.

Authors:  Gregg W C Thomas; Elias Dohmen; Daniel S T Hughes; Shwetha C Murali; Monica Poelchau; Karl Glastad; Clare A Anstead; Nadia A Ayoub; Phillip Batterham; Michelle Bellair; Greta J Binford; Hsu Chao; Yolanda H Chen; Christopher Childers; Huyen Dinh; Harsha Vardhan Doddapaneni; Jian J Duan; Shannon Dugan; Lauren A Esposito; Markus Friedrich; Jessica Garb; Robin B Gasser; Michael A D Goodisman; Dawn E Gundersen-Rindal; Yi Han; Alfred M Handler; Masatsugu Hatakeyama; Lars Hering; Wayne B Hunter; Panagiotis Ioannidis; Joy C Jayaseelan; Divya Kalra; Abderrahman Khila; Pasi K Korhonen; Carol Eunmi Lee; Sandra L Lee; Yiyuan Li; Amelia R I Lindsey; Georg Mayer; Alistair P McGregor; Duane D McKenna; Bernhard Misof; Mala Munidasa; Monica Munoz-Torres; Donna M Muzny; Oliver Niehuis; Nkechinyere Osuji-Lacy; Subba R Palli; Kristen A Panfilio; Matthias Pechmann; Trent Perry; Ralph S Peters; Helen C Poynton; Nikola-Michael Prpic; Jiaxin Qu; Dorith Rotenberg; Coby Schal; Sean D Schoville; Erin D Scully; Evette Skinner; Daniel B Sloan; Richard Stouthamer; Michael R Strand; Nikolaus U Szucsich; Asela Wijeratne; Neil D Young; Eduardo E Zattara; Joshua B Benoit; Evgeny M Zdobnov; Michael E Pfrender; Kevin J Hackett; John H Werren; Kim C Worley; Richard A Gibbs; Ariel D Chipman; Robert M Waterhouse; Erich Bornberg-Bauer; Matthew W Hahn; Stephen Richards
Journal:  Genome Biol       Date:  2020-01-23       Impact factor: 13.583

9.  A partial genome assembly of the miniature parasitoid wasp, Megaphragma amalphitanum.

Authors:  Fedor S Sharko; Artem V Nedoluzhko; Brandon M Lê; Svetlana V Tsygankova; Eugenia S Boulygina; Sergey M Rastorguev; Alexey S Sokolov; Fernando Rodriguez; Alexander M Mazur; Alexey A Polilov; Richard Benton; Michael B Evgen'ev; Irina R Arkhipova; Egor B Prokhortchouk; Konstantin G Skryabin
Journal:  PLoS One       Date:  2019-12-23       Impact factor: 3.240

10.  Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea).

Authors:  Yi Zhou; Dawei Huang; Zhaozhe Xin; Jinhua Xiao
Journal:  Genes (Basel)       Date:  2020-11-15       Impact factor: 4.096

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