Literature DB >> 29246537

Heat shock stress: Profile of differential expression in Corynebacterium pseudotuberculosis biovar Equi.

Anne Cybelle Pinto Gomide1, Pablo Gomes de Sá2, Ana Lidia Queiroz Cavalcante3, Thiago de Jesus Sousa4, Lucas Gabriel Rodrigues Gomes5, Rommel Thiago Juca Ramos6, Vasco Azevedo7, Artur Silva8, Adriana Ribeiro Carneiro Folador9.   

Abstract

Transcriptome studies on Corynebacterium pseudotuberculosis have recently contributed to the understanding about this microorganism's survival mechanisms in various hostile conditions. The gene expression profile of the C. pseudotuberculosis strain 1002 (Ovis biovar), has revealed genes that are possible candidates responsible for its maintenance in adverse environments, such as those found in the host. In another strain of this bacterium, 258 (Equi biovar), a high temperature condition was simulated, in order to verify which genes are responsible for promoting the persistence of the bacterium in these conditions, since it tolerates temperatures higher than 40°C, despite being a mesophilic bacterium. It was possible to generate a list of genes using RNAseq technology that possibly contribute to the survival of the bacteria in this hostile environment. A total of 562 genes were considered as differentially expressed, then, after the fold-change cutoff, 113 were considered induced and 114 repressed, resulting in a total of 227 genes. Therefore, hypothetical proteins presented a fold change above 6, and genes characteristically in control for this type of stress, such as hspR, grpE, and dnaK, presented a fold change above 3. The clpB gene, a chaperone, drew attention due to presenting a fold change above 3 and located in a pathogenicity island. These genes may contribute towards efficient solutions to the effects caused by ulcerative lymphangitis in equines, thus attenuating the damage it causes to agribusiness.
Copyright © 2017. Published by Elsevier B.V.

Entities:  

Keywords:  Biovar Equi; Corynebacterium pseudotuberculosis; Heat shock; RNA-seq; Transcriptomics

Mesh:

Substances:

Year:  2017        PMID: 29246537     DOI: 10.1016/j.gene.2017.12.015

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  4 in total

1.  A journey through the Corynebacterium pseudotuberculosis proteome promotes insights into its functional genome.

Authors:  Wanderson Marques da Silva; Nubia Seyffert; Artur Silva; Vasco Azevedo
Journal:  PeerJ       Date:  2021-12-23       Impact factor: 2.984

2.  Co-Expression Networks for Causal Gene Identification Based on RNA-Seq Data of Corynebacterium pseudotuberculosis.

Authors:  Edian F Franco; Pratip Rana; Ana Lidia Queiroz Cavalcante; Artur Luiz da Silva; Anne Cybelle Pinto Gomide; Adriana R Carneiro Folador; Vasco Azevedo; Preetam Ghosh; Rommel T J Ramos
Journal:  Genes (Basel)       Date:  2020-07-14       Impact factor: 4.096

3.  RNA-Seq-Based Comparative Transcriptome Analysis Highlights New Features of the Heat-Stress Response in the Extremophilic Bacterium Deinococcus radiodurans.

Authors:  Dong Xue; Wenzheng Liu; Yun Chen; Yingying Liu; Jiahui Han; Xiuxiu Geng; Jiang Li; Shijie Jiang; Zhengfu Zhou; Wei Zhang; Ming Chen; Min Lin; Marc Ongena; Jin Wang
Journal:  Int J Mol Sci       Date:  2019-11-09       Impact factor: 5.923

4.  An Integrated Database of Small RNAs and Their Interplay With Transcriptional Gene Regulatory Networks in Corynebacteria.

Authors:  Mariana Teixeira Dornelles Parise; Doglas Parise; Flavia Figueira Aburjaile; Anne Cybelle Pinto Gomide; Rodrigo Bentes Kato; Martin Raden; Rolf Backofen; Vasco Ariston de Carvalho Azevedo; Jan Baumbach
Journal:  Front Microbiol       Date:  2021-06-17       Impact factor: 5.640

  4 in total

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