Literature DB >> 29241242

Automated Screening of Emergency Department Notes for Drug-Associated Bleeding Adverse Events Occurring in Older Adults.

Richard D Boyce1, Jeremy Jao1, Taylor Miller2, Sandra L Kane-Gill3.   

Abstract

Objective To conduct research to show the value of text mining for automatically identifying suspected bleeding adverse drug events (ADEs) in the emergency department (ED). Methods A corpus of ED admission notes was manually annotated for bleeding ADEs. The notes were taken for patients ≥ 65 years of age who had an ICD-9 code for bleeding, the presence of hemoglobin value ≤ 8 g/dL, or were transfused > 2 units of packed red blood cells. This training corpus was used to develop bleeding ADE algorithms using Random Forest and Classification and Regression Tree (CART). A completely separate set of notes was annotated and used to test the classification performance of the final models using the area under the ROC curve (AUROC). Results The best performing CART resulted in an AUROC on the training set of 0.882. The model's AUROC on the test set was 0.827. At a sensitivity of 0.679, the model had a specificity of 0.908 and a positive predictive value (PPV) of 0.814. It had a relatively simple and intuitive structure consisting of 13 decision nodes and 14 leaf nodes. Decision path probabilities ranged from 0.041 to 1.0. The AUROC for the best performing Random Forest method on the training set was 0.917. On the test set, the model's AUROC was 0.859. At a sensitivity of 0.274, the model had a specificity of 0.986 and a PPV of 0.92. Conclusion Both models accurately identify bleeding ADEs using the presence or absence of certain clinical concepts in ED admission notes for older adult patients. The CART model is particularly noteworthy because it does not require significant technical overhead to implement. Future work should seek to replicate the results on a larger test set pulled from another institution.

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Year:  2017        PMID: 29241242      PMCID: PMC5802315          DOI: 10.4338/ACI-2017-02-RA-0036

Source DB:  PubMed          Journal:  Appl Clin Inform        ISSN: 1869-0327            Impact factor:   2.342


  17 in total

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2.  Assessing the National Electronic Injury Surveillance System-Cooperative Adverse Drug Event Surveillance project--six sites, United States, January 1-June 15, 2004.

Authors: 
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3.  Adverse drug event reporting in intensive care units: a survey of current practices.

Authors:  Sandra L Kane-Gill; John W Devlin
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Authors:  A K Jha; G J Kuperman; J M Teich; L Leape; B Shea; E Rittenberg; E Burdick; D L Seger; M Vander Vliet; D W Bates
Journal:  J Am Med Inform Assoc       Date:  1998 May-Jun       Impact factor: 4.497

5.  Performance of trigger tools in identifying adverse drug events in emergency department patients: a validation study.

Authors:  Andrei Karpov; Catherine Parcero; Catherine P Y Mok; Chandima Panditha; Eugenia Yu; Linda Dempster; Corinne M Hohl
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Review 6.  Reducing the risk of adverse drug events in older adults.

Authors:  Richard W Pretorius; Gordana Gataric; Steven K Swedlund; John R Miller
Journal:  Am Fam Physician       Date:  2013-03-01       Impact factor: 3.292

7.  Going Beyond Administrative Data: Retrospective Evaluation of an Algorithm Using the Electronic Health Record to Help Identify Bleeding Events Among Hospitalized Medical Patients on Warfarin.

Authors:  James P Moriarty; Paul R Daniels; Dennis M Manning; John G O'Meara; Narith N Ou; Tamara M Berg; Jordan D Haag; Daniel L Roellinger; James M Naessens
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8.  The incident reporting system does not detect adverse drug events: a problem for quality improvement.

Authors:  D J Cullen; D W Bates; S D Small; J B Cooper; A R Nemeskal; L L Leape
Journal:  Jt Comm J Qual Improv       Date:  1995-10

9.  Phenotyping Adverse Drug Reactions: Statin-Related Myotoxicity.

Authors:  Laura K Wiley; Jeremy D Moretz; Joshua C Denny; Josh F Peterson; William S Bush
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2015-03-25

10.  NOBLE - Flexible concept recognition for large-scale biomedical natural language processing.

Authors:  Eugene Tseytlin; Kevin Mitchell; Elizabeth Legowski; Julia Corrigan; Girish Chavan; Rebecca S Jacobson
Journal:  BMC Bioinformatics       Date:  2016-01-14       Impact factor: 3.169

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  4 in total

1.  Development and Evaluation of a Clinical Decision Support System to Improve Medication Safety.

Authors:  Sara Ibáñez-Garcia; Carmen Rodriguez-Gonzalez; Vicente Escudero-Vilaplana; Maria Luisa Martin-Barbero; Belén Marzal-Alfaro; Jose Luis De la Rosa-Triviño; Irene Iglesias-Peinado; Ana Herranz-Alonso; Maria Sanjurjo Saez
Journal:  Appl Clin Inform       Date:  2019-07-17       Impact factor: 2.342

2.  Consensus Development of a Modern Ontology of Emergency Department Presenting Problems-The Hierarchical Presenting Problem Ontology (HaPPy).

Authors:  Steven Horng; Nathaniel R Greenbaum; Larry A Nathanson; James C McClay; Foster R Goss; Jeffrey A Nielson
Journal:  Appl Clin Inform       Date:  2019-06-12       Impact factor: 2.342

3.  Analyzing adverse drug reaction using statistical and machine learning methods: A systematic review.

Authors:  Hae Reong Kim; MinDong Sung; Ji Ae Park; Kyeongseob Jeong; Ho Heon Kim; Suehyun Lee; Yu Rang Park
Journal:  Medicine (Baltimore)       Date:  2022-06-24       Impact factor: 1.817

4.  Using Electronic Health Records to Identify Adverse Drug Events in Ambulatory Care: A Systematic Review.

Authors:  Chenchen Feng; David Le; Allison B McCoy
Journal:  Appl Clin Inform       Date:  2019-02-20       Impact factor: 2.342

  4 in total

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