Literature DB >> 29238119

Automatic segmentation and statistical shape modeling of the paranasal sinuses to estimate natural variations.

Ayushi Sinha1, Simon Leonard1, Austin Reiter1, Masaru Ishii2, Russell H Taylor1, Gregory D Hager1.   

Abstract

We present an automatic segmentation and statistical shape modeling system for the paranasal sinuses which allows us to locate structures in and around the sinuses, as well as to observe the natural variations that occur in these structures. This system involves deformably registering a given patient image to a manually segmented template image, and using the resulting deformation field to transfer labels from template to patient. We use 3D snake splines to correct errors in the deformable registration. Once we have several accurately segmented images, we build statistical shape models for each structure in the sinus allowing us to observe the mean shape of the population, as well as the variations observed in the population. These shape models are useful in several ways. First, regular video-CT registration methods are insufficient to accurately register pre-operative computed tomography (CT) images with intra-operative endoscopy video because of deformations that occur in structures containing high amounts of erectile tissue. Our aim is to estimate these deformations using our shape models in order to improve video-CT registration, as well as to distinguish normal variations in anatomy from abnormal variations, and automatically detect and stage pathology. We can also compare the mean shape and variances of different populations, such as different genders or ethnicities, and observe the differences and similarities, as well as of different age groups, and observe the developmental changes that occur in the sinuses.

Entities:  

Keywords:  Paranasal sinuses; Segmentation; Statistical shape modeling

Year:  2016        PMID: 29238119      PMCID: PMC5725758          DOI: 10.1117/12.2217337

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  5 in total

1.  Snakes, shapes, and gradient vector flow.

Authors:  C Xu; J L Prince
Journal:  IEEE Trans Image Process       Date:  1998       Impact factor: 10.856

2.  Spline-based deforming ellipsoids for interactive 3D bioimage segmentation.

Authors:  Ricard Delgado-Gonzalo; Nicolas Chenouard; Michael Unser
Journal:  IEEE Trans Image Process       Date:  2013-05-22       Impact factor: 10.856

3.  A reproducible evaluation of ANTs similarity metric performance in brain image registration.

Authors:  Brian B Avants; Nicholas J Tustison; Gang Song; Philip A Cook; Arno Klein; James C Gee
Journal:  Neuroimage       Date:  2010-09-17       Impact factor: 6.556

4.  Iterative refinement of point correspondences for 3D statistical shape models.

Authors:  Sharmishtaa Seshamani; Gouthami Chintalapani; Russell Taylor
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

5.  The optimal template effect in hippocampus studies of diseased populations.

Authors:  Brian B Avants; Paul Yushkevich; John Pluta; David Minkoff; Marc Korczykowski; John Detre; James C Gee
Journal:  Neuroimage       Date:  2009-10-08       Impact factor: 6.556

  5 in total
  4 in total

1.  Endoscopic navigation in the clinic: registration in the absence of preoperative imaging.

Authors:  Ayushi Sinha; Masaru Ishii; Gregory D Hager; Russell H Taylor
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-05-31       Impact factor: 2.924

2.  Automatic forensic identification using 3D sphenoid sinus segmentation and deep characterization.

Authors:  Kamal Souadih; Ahror Belaid; Douraied Ben Salem; Pierre-Henri Conze
Journal:  Med Biol Eng Comput       Date:  2019-12-17       Impact factor: 2.602

3.  Anatomically Constrained Video-CT Registration via the V-IMLOP Algorithm.

Authors:  Seth D Billings; Ayushi Sinha; Austin Reiter; Simon Leonard; Masaru Ishii; Gregory D Hager; Russell H Taylor
Journal:  Med Image Comput Comput Assist Interv       Date:  2016-10-02

4.  The deformable most-likely-point paradigm.

Authors:  Ayushi Sinha; Seth D Billings; Austin Reiter; Xingtong Liu; Masaru Ishii; Gregory D Hager; Russell H Taylor
Journal:  Med Image Anal       Date:  2019-05-01       Impact factor: 8.545

  4 in total

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