Literature DB >> 29235675

Evidence for a hierarchical transcriptional circuit in Drosophila male germline involving testis-specific TAF and two gene-specific transcription factors, Mod and Acj6.

Mei Jiang1,2, Zhengliang Gao1,3, Jian Wang4, Dmitry I Nurminsky2.   

Abstract

To analyze transcription factors involved in gene regulation by testis-specific TAF (tTAF), tTAF-dependent promoters were mapped and analyzed in silico. Core promoters show decreased AT content, paucity of classical promoter motifs, and enrichment with translation control element CAAAATTY. Scanning of putative regulatory regions for known position frequency matrices identified 19 transcription regulators possibly contributing to tTAF-driven gene expression. Decreased male fertility associated with mutation in one of the regulators, Acj6, indicates its involvement in male reproduction. Transcriptome study of testes from male mutants for tTAF, Acj6, and previously characterized tTAF-interacting factor Modulo implies the existence of a regulatory hierarchy of tTAF, Modulo and Acj6, in which Modulo and/or Acj6 regulate one-third of tTAF-dependent genes.
© 2017 Federation of European Biochemical Societies.

Entities:  

Keywords:  zzm321990Drosophilazzm321990; gene-specific transcription regulator; hierarchical transcriptional circuit; spermatogenesis; testis-specific TAF

Mesh:

Substances:

Year:  2017        PMID: 29235675      PMCID: PMC5785934          DOI: 10.1002/1873-3468.12937

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  66 in total

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Review 2.  Microtubules and spermatogenesis.

Authors:  Liza O'Donnell; Moira K O'Bryan
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3.  A new translational repression element and unusual transcriptional control regulate expression of don juan during Drosophila spermatogenesis.

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Journal:  Mech Dev       Date:  2002-01       Impact factor: 1.882

4.  Sustained elongation of sperm tail promoted by local remodeling of giant mitochondria in Drosophila.

Authors:  Tatsuhiko Noguchi; Michiko Koizumi; Shigeo Hayashi
Journal:  Curr Biol       Date:  2011-05-05       Impact factor: 10.834

5.  A new Drosophila POU gene, pdm3, acts in odor receptor expression and axon targeting of olfactory neurons.

Authors:  Andrea L Tichy; Anandasankar Ray; John R Carlson
Journal:  J Neurosci       Date:  2008-07-09       Impact factor: 6.167

6.  Promoter elements associated with RNA Pol II stalling in the Drosophila embryo.

Authors:  David A Hendrix; Joung-Woo Hong; Julia Zeitlinger; Daniel S Rokhsar; Michael S Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-27       Impact factor: 11.205

7.  UpSet: Visualization of Intersecting Sets.

Authors:  Alexander Lex; Nils Gehlenborg; Hendrik Strobelt; Romain Vuillemot; Hanspeter Pfister
Journal:  IEEE Trans Vis Comput Graph       Date:  2014-12       Impact factor: 4.579

8.  FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system.

Authors:  Lihua Julie Zhu; Ryan G Christensen; Majid Kazemian; Christopher J Hull; Metewo Selase Enuameh; Matthew D Basciotta; Jessie A Brasefield; Cong Zhu; Yuna Asriyan; David S Lapointe; Saurabh Sinha; Scot A Wolfe; Michael H Brodsky
Journal:  Nucleic Acids Res       Date:  2010-11-19       Impact factor: 16.971

9.  tBRD-1 selectively controls gene activity in the Drosophila testis and interacts with two new members of the bromodomain and extra-terminal (BET) family.

Authors:  Ina Theofel; Marek Bartkuhn; Tim Hundertmark; Thomas Boettger; Stefanie M K Gärtner; Katja Leser; Stephan Awe; Michael Schipper; Renate Renkawitz-Pohl; Christina Rathke
Journal:  PLoS One       Date:  2014-09-24       Impact factor: 3.240

10.  UniPROBE: an online database of protein binding microarray data on protein-DNA interactions.

Authors:  Daniel E Newburger; Martha L Bulyk
Journal:  Nucleic Acids Res       Date:  2008-10-08       Impact factor: 16.971

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  2 in total

1.  Drosophila melanogaster tPlus3a and tPlus3b ensure full male fertility by regulating transcription of Y-chromosomal, seminal fluid, and heat shock genes.

Authors:  Tim Hundertmark; Sabrina Kreutz; Nastasja Merle; Andrea Nist; Boris Lamp; Thorsten Stiewe; Alexander Brehm; Renate Renkawitz-Pohl; Christina Rathke
Journal:  PLoS One       Date:  2019-03-07       Impact factor: 3.240

2.  Norepinephrine triggers an immediate-early regulatory network response in primary human white adipocytes.

Authors:  Juan Carlos Higareda-Almaraz; Michael Karbiener; Maude Giroud; Florian M Pauler; Teresa Gerhalter; Stephan Herzig; Marcel Scheideler
Journal:  BMC Genomics       Date:  2018-11-03       Impact factor: 3.969

  2 in total

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