Literature DB >> 29230640

New class of reduced computationally efficient neuronal models for large-scale simulations of brain dynamics.

Maxim Komarov1, Giri Krishnan2, Sylvain Chauvette3, Nikolai Rulkov4, Igor Timofeev3,5, Maxim Bazhenov1.   

Abstract

During slow-wave sleep, brain electrical activity is dominated by the slow (< 1 Hz) electroencephalogram (EEG) oscillations characterized by the periodic transitions between active (or Up) and silent (or Down) states in the membrane voltage of the cortical and thalamic neurons. Sleep slow oscillation is believed to play critical role in consolidation of recent memories. Past computational studies, based on the Hodgkin-Huxley type neuronal models, revealed possible intracellular and network mechanisms of the neuronal activity during sleep, however, they failed to explore the large-scale cortical network dynamics depending on collective behavior in the large populations of neurons. In this new study, we developed a novel class of reduced discrete time spiking neuron models for large-scale network simulations of wake and sleep dynamics. In addition to the spiking mechanism, the new model implemented nonlinearities capturing effects of the leak current, the Ca2+ dependent K+ current and the persistent Na+ current that were found to be critical for transitions between Up and Down states of the slow oscillation. We applied the new model to study large-scale two-dimensional cortical network activity during slow-wave sleep. Our study explained traveling wave dynamics and characteristic synchronization properties of transitions between Up and Down states of the slow oscillation as observed in vivo in recordings from cats. We further predict a critical role of synaptic noise and slow adaptive currents for spike sequence replay as found during sleep related memory consolidation.

Entities:  

Keywords:  Large-scale simulations; Slow-wave sleep oscillations; Up and down states

Mesh:

Substances:

Year:  2017        PMID: 29230640     DOI: 10.1007/s10827-017-0663-7

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  71 in total

1.  Fourier analysis of sinusoidally driven thalamocortical relay neurons and a minimal integrate-and-fire-or-burst model.

Authors:  G D Smith; C L Cox; S M Sherman; J Rinzel
Journal:  J Neurophysiol       Date:  2000-01       Impact factor: 2.714

2.  Barrages of synaptic activity control the gain and sensitivity of cortical neurons.

Authors:  Yousheng Shu; Andrea Hasenstaub; Mathilde Badoual; Thierry Bal; David A McCormick
Journal:  J Neurosci       Date:  2003-11-12       Impact factor: 6.167

3.  Impact of intrinsic properties and synaptic factors on the activity of neocortical networks in vivo.

Authors:  I Timofeev; F Grenier; M Steriade
Journal:  J Physiol Paris       Date:  2000 Sep-Dec

4.  Expression and biophysical properties of Kv1 channels in supragranular neocortical pyramidal neurones.

Authors:  D Guan; J C F Lee; T Tkatch; D J Surmeier; W E Armstrong; R C Foehring
Journal:  J Physiol       Date:  2005-12-22       Impact factor: 5.182

5.  Low-frequency rhythms in the thalamus of intact-cortex and decorticated cats.

Authors:  I Timofeev; M Steriade
Journal:  J Neurophysiol       Date:  1996-12       Impact factor: 2.714

6.  Cellular basis of EEG slow rhythms: a study of dynamic corticothalamic relationships.

Authors:  D Contreras; M Steriade
Journal:  J Neurosci       Date:  1995-01       Impact factor: 6.167

7.  Mechanisms of long-lasting hyperpolarizations underlying slow sleep oscillations in cat corticothalamic networks.

Authors:  D Contreras; I Timofeev; M Steriade
Journal:  J Physiol       Date:  1996-07-01       Impact factor: 5.182

8.  Sleep deprivation: effect on sleep stages and EEG power density in man.

Authors:  A A Borbély; F Baumann; D Brandeis; I Strauch; D Lehmann
Journal:  Electroencephalogr Clin Neurophysiol       Date:  1981-05

9.  Intracellular analysis of relations between the slow (< 1 Hz) neocortical oscillation and other sleep rhythms of the electroencephalogram.

Authors:  M Steriade; A Nuñez; F Amzica
Journal:  J Neurosci       Date:  1993-08       Impact factor: 6.167

10.  Voltage clamp analysis of acetylcholine produced end-plate current fluctuations at frog neuromuscular junction.

Authors:  C R Anderson; C F Stevens
Journal:  J Physiol       Date:  1973-12       Impact factor: 5.182

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  2 in total

1.  Large time step discrete-time modeling of sharp wave activity in hippocampal area CA3.

Authors:  Paola Malerba; Nikolai F Rulkov; Maxim Bazhenov
Journal:  Commun Nonlinear Sci Numer Simul       Date:  2018-12-20       Impact factor: 4.260

2.  Simulating human sleep spindle MEG and EEG from ion channel and circuit level dynamics.

Authors:  B Q Rosen; G P Krishnan; P Sanda; M Komarov; T Sejnowski; N Rulkov; I Ulbert; L Eross; J Madsen; O Devinsky; W Doyle; D Fabo; S Cash; M Bazhenov; E Halgren
Journal:  J Neurosci Methods       Date:  2018-10-06       Impact factor: 2.390

  2 in total

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