Literature DB >> 29230626

Efficient One-Step Fusion PCR Based on Dual-Asymmetric Primers and Two-Step Annealing.

Yilan Liu1, Jinjin Chen2,3, Anders Thygesen4.   

Abstract

Gene splicing by fusion PCR is a versatile and widely used methodology, especially in synthetic biology. We here describe a rapid method for splicing two fragments by one-round fusion PCR with a dual-asymmetric primers and two-step annealing (ODT) method. During the process, the asymmetric intermediate fragments were generated in the early stage. Thereafter, they were hybridized in the subsequent cycles to serve as template for the target full-length product. The process parameters such as primer ratio, elongation temperature and cycle numbers were optimized. In addition, the fusion products produced with this method were successfully applied in seamless genome editing. The fusion of two fragments by this method takes less than 0.5 day. The method is expected to facilitate various kinds of complex genetic engineering projects with enhanced efficiency.

Keywords:  Dual-asymmetric primers; Fusion PCR; Two-step annealing

Mesh:

Substances:

Year:  2018        PMID: 29230626     DOI: 10.1007/s12033-017-0050-7

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  16 in total

1.  Gene splicing and mutagenesis by PCR-driven overlap extension.

Authors:  Karin L Heckman; Larry R Pease
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

2.  Dual asymmetric PCR: one-step construction of synthetic genes.

Authors:  G S Sandhu; R A Aleff; B C Kline
Journal:  Biotechniques       Date:  1992-01       Impact factor: 1.993

3.  Minimum GC-rich sequences for overlap extension PCR and primer annealing.

Authors:  Mikiko Nakamura; Ayako Suzuki; Hisashi Hoshida; Rinji Akada
Journal:  Methods Mol Biol       Date:  2014

4.  Precise gene fusion by PCR.

Authors:  J Yon; M Fried
Journal:  Nucleic Acids Res       Date:  1989-06-26       Impact factor: 16.971

5.  Characterization of Recombinant Thermococcus kodakaraensis (KOD) DNA Polymerases Produced Using Silkworm-Baculovirus Expression Vector System.

Authors:  Mami Yamashita; Jian Xu; Daisuke Morokuma; Kazuma Hirata; Masato Hino; Hiroaki Mon; Masateru Takahashi; Samir M Hamdan; Kosuke Sakashita; Kazuhiro Iiyama; Yutaka Banno; Takahiro Kusakabe; Jae Man Lee
Journal:  Mol Biotechnol       Date:  2017-06       Impact factor: 2.695

6.  In vivo interrogation of gene function in the mammalian brain using CRISPR-Cas9.

Authors:  Lukasz Swiech; Matthias Heidenreich; Abhishek Banerjee; Naomi Habib; Yinqing Li; John Trombetta; Mriganka Sur; Feng Zhang
Journal:  Nat Biotechnol       Date:  2014-10-19       Impact factor: 54.908

7.  Characterization of DNA polymerase from Pyrococcus sp. strain KOD1 and its application to PCR.

Authors:  M Takagi; M Nishioka; H Kakihara; M Kitabayashi; H Inoue; B Kawakami; M Oka; T Imanaka
Journal:  Appl Environ Microbiol       Date:  1997-11       Impact factor: 4.792

8.  Somatic expression of herpes thymidine kinase in mice following injection of a fusion gene into eggs.

Authors:  R L Brinster; H Y Chen; M Trumbauer; A W Senear; R Warren; R D Palmiter
Journal:  Cell       Date:  1981-11       Impact factor: 41.582

9.  PCR-Based Seamless Genome Editing with High Efficiency and Fidelity in Escherichia coli.

Authors:  Yilan Liu; Maohua Yang; Jinjin Chen; Daojiang Yan; Wanwan Cheng; Yanyan Wang; Anders Thygesen; Ruonan Chen; Jianmin Xing; Qinhong Wang; Yanhe Ma
Journal:  PLoS One       Date:  2016-03-28       Impact factor: 3.240

10.  High production of fatty alcohols in Escherichia coli with fatty acid starvation.

Authors:  Yilan Liu; Sha Chen; Jinjin Chen; Jiemin Zhou; Yanyan Wang; Maohua Yang; Xianni Qi; Jianmin Xing; Qinhong Wang; Yanhe Ma
Journal:  Microb Cell Fact       Date:  2016-07-27       Impact factor: 5.328

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