| Literature DB >> 29230239 |
Yu Zhang1,2, Bei Wang1,2, Jin Jing1,2, Jian Zhang2, Junzhong Zou2, Masatoshi Nakamura3.
Abstract
Feature extraction from physiological signals of EEG (electroencephalogram) is an essential part for sleep staging. In this study, multidomain feature extraction was investigated based on time domain analysis, nonlinear analysis, and frequency domain analysis. Unlike the traditional feature calculation in time domain, a sequence merging method was developed as a preprocessing procedure. The objective is to eliminate the clutter waveform and highlight the characteristic waveform for further analysis. The numbers of the characteristic activities were extracted as the features from time domain. The contributions of features from different domains to the sleep stages were compared. The effectiveness was further analyzed by automatic sleep stage classification and compared with the visual inspection. The overnight clinical sleep EEG recordings of 3 patients after the treatment of Continuous Positive Airway Pressure (CPAP) were tested. The obtained results showed that the developed method can highlight the characteristic activity which is useful for both automatic sleep staging and visual inspection. Furthermore, it can be a training tool for better understanding the appearance of characteristic waveforms from raw sleep EEG which is mixed and complex in time domain.Entities:
Mesh:
Year: 2017 PMID: 29230239 PMCID: PMC5694609 DOI: 10.1155/2017/4574079
Source DB: PubMed Journal: Comput Intell Neurosci
Features definitions in frequency domain.
| Symbols | Notation | Equations |
|---|---|---|
| FR | Ratio of the power of |
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| FR | Ratio of the power of |
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| FR | Ratio of the power of |
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| FR | Ratio of the power of |
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δ: 0.5–2 Hz; θ: 2–7 Hz; α: 8–13 Hz; β: 13–30 Hz; T: 0.5–30 Hz.
Figure 1Preprocessing procedures before feature extraction from the time domain based on the sequence merging rules to eliminate the clutter from raw EEG.
Features definitions in time domain.
| Symbols | Notation | Equations |
|---|---|---|
| TN | Number of | ave{TN |
| TN | Number of | ave{TN |
| TN | Number of | ave{TN |
| TN | Number of | ave{TN |
δ: 0.5–2 Hz; θ: 2–7 Hz; α: 8–13 Hz; β: 13–30 Hz; T: 0.5–30 Hz.
Additional features of EOG and EMG.
| Symbols | Notation | Equations |
|---|---|---|
| AM | Mean value of EOG signal | ave{AM(LOC), AM(ROC)} |
| AV | Variance value of EOG signal | ave{AV(LOC), AV(ROC)} |
| AS | Span value of EOG signal | ave{AS(LOC), AS(ROC)} |
| AC | Zero crossing of EMG signal | AC (chin-EMG) |
Figure 2Comparison of the mean values of extracted features from frequency domain, nonlinear dynamics, and time domain among the sleep stages.
Feature extraction results.
| Subject | State | FR | FR | FR | FR | ApEn | TN | TN | TN | TN |
|---|---|---|---|---|---|---|---|---|---|---|
| Subject 1 | W | 0.28 ± 0.12 | 0.36 ± 0.17 | 0.35 ± 0.15 | 0.37 ± 0.12 | 0.76 ± 0.10 | 0.10 ± 0.09 | 0.37 ± 0.16 | 0.55 ± 0.19 | 0.33 ± 0.13 |
| REM | 0.32 ± 0.08 | 0.53 ± 0.09 | 0.28 ± 0.09 | 0.26 ± 0.06 | 0.68 ± 0.07 | 0.46 ± 0.08 | 0.65 ± 0.13 | 0.07 ± 0.04 | 0.01 ± 0.01 | |
| S1 | 0.36 ± 0.11 | 0.49 ± 0.12 | 0.32 ± 0.10 | 0.31 ± 0.08 | 0.62 ± 0.05 | 0.38 ± 0.10 | 0.60 ± 0.12 | 0.18 ± 0.04 | 0.01 ± 0.01 | |
| S2 | 0.39 ± 0.14 | 0.53 ± 0.13 | 0.13 ± 0.05 | 0.13 ± 0.06 | 0.57 ± 0.11 | 0.50 ± 0.10 | 0.52 ± 0.11 | 0.09 ± 0.04 | 0.01 ± 0.01 | |
| SWS | 0.80 ± 0.09 | 0.32 ± 0.09 | 0.05 ± 0.02 | 0.03 ± 0.01 | 0.36 ± 0.14 | 0.84 ± 0.07 | 0.28 ± 0.09 | 0.01 ± 0.01 | 0 | |
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| Subject 2 | W | 0.30 ± 0.11 | 0.31 ± 0.11 | 0.52 ± 0.15 | 0.51 ± 0.18 | 0.78 ± 0.13 | 0.08 ± 0.06 | 0.41 ± 0.11 | 0.57 ± 0.12 | 0.22 ± 0.09 |
| REM | 0.37 ± 0.13 | 0.68 ± 0.12 | 0.28 ± 0.08 | 0.33 ± 0.11 | 0.67 ± 0.08 | 0.49 ± 0.15 | 0.68 ± 0.14 | 0.05 ± 0.03 | 0.01 ± 0.01 | |
| S1 | 0.31 ± 0.11 | 0.55 ± 0.11 | 0.43 ± 0.13 | 0.42 ± 0.11 | 0.72 ± 0.09 | 0.24 ± 0.10 | 0.75 ± 0.11 | 0.21 ± 0.08 | 0.03 ± 0.02 | |
| S2 | 0.52 ± 0.15 | 0.63 ± 0.11 | 0.21 ± 0.07 | 0.25 ± 0.12 | 0.64 ± 0.12 | 0.45 ± 0.13 | 0.70 ± 0.14 | 0.09 ± 0.04 | 0.01 ± 0.01 | |
| SWS | 0.83 ± 0.06 | 0.37 ± 0.09 | 0.05 ± 0.03 | 0.02 ± 0.01 | 0.32 ± 0.11 | 0.87 ± 0.08 | 0.23 ± 0.09 | 0.01 ± 0.01 | 0 | |
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| Subject 3 | W | 0.43 ± 0.18 | 0.43 ± 0.16 | 0.36 ± 0.16 | 0.47 ± 0.17 | 0.79 ± 0.18 | 0.11 ± 0.07 | 0.51 ± 0.11 | 0.41 ± 0.16 | 0.17 ± 0.09 |
| REM | 0.30 ± 0.14 | 0.75 ± 0.16 | 0.29 ± 0.09 | 0.26 ± 0.11 | 0.75 ± 0.09 | 0.51 ± 0.14 | 0.66 ± 0.12 | 0.03 ± 0.01 | 0.01 ± 0.01 | |
| S1 | 0.49 ± 0.14 | 0.54 ± 0.12 | 0.31 ± 0.17 | 0.37 ± 0.18 | 0.62 ± 0.18 | 0.38 ± 0.14 | 0.57 ± 0.12 | 0.17 ± 0.11 | 0.09 ± 0.05 | |
| S2 | 0.49 ± 0.16 | 0.70 ± 0.17 | 0.19 ± 0.06 | 0.21 ± 0.08 | 0.56 ± 0.11 | 0.47 ± 0.11 | 0.54 ± 0.11 | 0.05 ± 0.03 | 0.02 ± 0.01 | |
| SWS | 0.82 ± 0.06 | 0.34 ± 0.09 | 0.03 ± 0.02 | 0.02 ± 0.01 | 0.33 ± 0.05 | 0.91 ± 0.06 | 0.20 ± 0.07 | 0.01 ± 0.01 | 0 | |
Comparison of classification results.
| Frequency domain + additional features | Nonlinear + additional features | Time domain + additional features | |
|---|---|---|---|
| Subject 1 | 86.48% (851/984) | 80.59% (793/984) | 87.09% (857/984) |
| Subject 2 | 82.49% (811/983) | 75.18% (739/983) | 83.11% (817/983) |
| Subject 3 | 74.87% (704/940) | 70.85% (666/940) | 76.08% (715/940) |
| Average | 81.38% | 75.61% | 82.18% |
Figure 3Comparison of classification accuracy of sleep stages.