Literature DB >> 29227675

An ab Initio Exploration of the Bergman Cyclization.

Adam R Luxon1, Natalie Orms2, René Kanters1, Anna I Krylov2, Carol A Parish1.   

Abstract

The Bergman cyclization is an important reaction in which an enediyne cyclizes to produce a highly reactive diradical species, p-benzyne. Enediyne motifs are found in natural antitumor antibiotic compounds, such as calicheammicin and dynemicin. Understanding the energetics of cyclization is required to better control the initiation of the cyclization, which induces cell death. We computed the singlet and triplet potential energy surfaces for the Bergman cyclization of (Z)-hex-3-ene-1,5-diyne using the CCSD and EOM-SF-CCSD methods. The triplet enediyne and transition state were found to have C2 symmetry, which contrasts with the singlet reactant and transition state that possess C2v symmetry. We analyzed the frontier orbitals of both cyclization pathways to explain the large energetic barrier of the triplet cyclization. Reaction energies were calculated using CCSD(T)/cc-pVTZ single-point calculations on structures optimized with CCSD/cc-pVDZ. The singlet reaction was found to be slightly endothermic (ΔHrxn = 13.76 kcal/mol) and the triplet reaction was found to be highly exothermic (ΔHrxn = -33.29 kcal/mol). The adiabatic singlet-triplet gap of p-benzyne, computed with EOM-SF-CCSD/cc-pVTZ, was found to be 3.56 kcal/mol, indicating a singlet ground state.

Entities:  

Year:  2017        PMID: 29227675     DOI: 10.1021/acs.jpca.7b10576

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  1 in total

1.  Angle distortion model for predicting enediyne activation towards Bergman cyclization: an alternate to the distance theory.

Authors:  Prabuddha Bhattacharya; Soham Chakraborty; Ashwin Balaji; Amit Basak
Journal:  RSC Adv       Date:  2022-08-18       Impact factor: 4.036

  1 in total

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