Literature DB >> 29227285

Shifts in podocyte histone H3K27me3 regulate mouse and human glomerular disease.

Syamantak Majumder1, Karina Thieme1, Sri N Batchu1, Tamadher A Alghamdi1, Bridgit B Bowskill1, M Golam Kabir1, Youan Liu1, Suzanne L Advani1, Kathryn E White2, Laurette Geldenhuys3, Karthik K Tennankore4, Penelope Poyah4, Ferhan S Siddiqi4, Andrew Advani1.   

Abstract

Histone protein modifications control fate determination during normal development and dedifferentiation during disease. Here, we set out to determine the extent to which dynamic changes to histones affect the differentiated phenotype of ordinarily quiescent adult glomerular podocytes. To do this, we examined the consequences of shifting the balance of the repressive histone H3 lysine 27 trimethylation (H3K27me3) mark in podocytes. Adriamycin nephrotoxicity and subtotal nephrectomy (SNx) studies indicated that deletion of the histone methylating enzyme EZH2 from podocytes decreased H3K27me3 levels and sensitized mice to glomerular disease. H3K27me3 was enriched at the promoter region of the Notch ligand Jag1 in podocytes, and derepression of Jag1 by EZH2 inhibition or knockdown facilitated podocyte dedifferentiation. Conversely, inhibition of the Jumonji C domain-containing demethylases Jmjd3 and UTX increased the H3K27me3 content of podocytes and attenuated glomerular disease in adriamycin nephrotoxicity, SNx, and diabetes. Podocytes in glomeruli from humans with focal segmental glomerulosclerosis or diabetic nephropathy exhibited diminished H3K27me3 and heightened UTX content. Analogous to human disease, inhibition of Jmjd3 and UTX abated nephropathy progression in mice with established glomerular injury and reduced H3K27me3 levels. Together, these findings indicate that ostensibly stable chromatin modifications can be dynamically regulated in quiescent cells and that epigenetic reprogramming can improve outcomes in glomerular disease by repressing the reactivation of developmental pathways.

Entities:  

Keywords:  Chronic kidney disease; Diabetes; Endocrinology; Epigenetics; Nephrology

Mesh:

Substances:

Year:  2017        PMID: 29227285      PMCID: PMC5749498          DOI: 10.1172/JCI95946

Source DB:  PubMed          Journal:  J Clin Invest        ISSN: 0021-9738            Impact factor:   14.808


  71 in total

1.  A principle for counting tissue structures on random sections.

Authors:  E R WEIBEL; D M GOMEZ
Journal:  J Appl Physiol       Date:  1962-03       Impact factor: 3.531

2.  Histone demethylation by a family of JmjC domain-containing proteins.

Authors:  Yu-ichi Tsukada; Jia Fang; Hediye Erdjument-Bromage; Maria E Warren; Christoph H Borchers; Paul Tempst; Yi Zhang
Journal:  Nature       Date:  2005-12-18       Impact factor: 49.962

3.  A maladaptive role for EP4 receptors in podocytes.

Authors:  Erin M Stitt-Cavanagh; Wissam H Faour; Kaede Takami; Anthony Carter; Barbara Vanderhyden; Youfei Guan; Andre Schneider; Matthew D Breyer; Christopher R J Kennedy
Journal:  J Am Soc Nephrol       Date:  2010-07-29       Impact factor: 10.121

4.  Janus Kinase 2 Regulates Transcription Factor EB Expression and Autophagy Completion in Glomerular Podocytes.

Authors:  Tamadher A Alghamdi; Syamantak Majumder; Karina Thieme; Sri N Batchu; Kathryn E White; Youan Liu; Angela S Brijmohan; Bridgit B Bowskill; Suzanne L Advani; Minna Woo; Andrew Advani
Journal:  J Am Soc Nephrol       Date:  2017-04-19       Impact factor: 10.121

5.  Epigenetic modification at Notch responsive promoters blunts efficacy of inducing notch pathway reactivation after myocardial infarction.

Authors:  Giulia Felician; Chiara Collesi; Marina Lusic; Valentina Martinelli; Matteo Dal Ferro; Lorena Zentilin; Serena Zacchigna; Mauro Giacca
Journal:  Circ Res       Date:  2014-08-11       Impact factor: 17.367

Review 6.  Histone demethylases in physiology and cancer: a tale of two enzymes, JMJD3 and UTX.

Authors:  Kelly Marie Arcipowski; Carlos Alberto Martinez; Panagiotis Ntziachristos
Journal:  Curr Opin Genet Dev       Date:  2016-05-03       Impact factor: 5.578

7.  Adriamycin alters glomerular endothelium to induce proteinuria.

Authors:  Marie Jeansson; Karin Björck; Olav Tenstad; Börje Haraldsson
Journal:  J Am Soc Nephrol       Date:  2008-12-10       Impact factor: 10.121

8.  Activated protein C protects against diabetic nephropathy by inhibiting endothelial and podocyte apoptosis.

Authors:  Berend Isermann; Ilya A Vinnikov; Thati Madhusudhan; Stefanie Herzog; Muhammed Kashif; Janusch Blautzik; Marcus A F Corat; Martin Zeier; Erwin Blessing; Jun Oh; Bruce Gerlitz; David T Berg; Brian W Grinnell; Triantafyllos Chavakis; Charles T Esmon; Hartmut Weiler; Angelika Bierhaus; Peter P Nawroth
Journal:  Nat Med       Date:  2007-11-04       Impact factor: 53.440

9.  The Histone Demethylase UTX Promotes Brown Adipocyte Thermogenic Program Via Coordinated Regulation of H3K27 Demethylation and Acetylation.

Authors:  Lin Zha; Fenfen Li; Rui Wu; Liana Artinian; Vincent Rehder; Liqing Yu; Houjie Liang; Bingzhong Xue; Hang Shi
Journal:  J Biol Chem       Date:  2015-08-25       Impact factor: 5.157

10.  A selective jumonji H3K27 demethylase inhibitor modulates the proinflammatory macrophage response.

Authors:  Laurens Kruidenier; Chun-wa Chung; Zhongjun Cheng; John Liddle; KaHing Che; Gerard Joberty; Marcus Bantscheff; Chas Bountra; Angela Bridges; Hawa Diallo; Dirk Eberhard; Sue Hutchinson; Emma Jones; Roy Katso; Melanie Leveridge; Palwinder K Mander; Julie Mosley; Cesar Ramirez-Molina; Paul Rowland; Christopher J Schofield; Robert J Sheppard; Julia E Smith; Catherine Swales; Robert Tanner; Pamela Thomas; Anthony Tumber; Gerard Drewes; Udo Oppermann; Dinshaw J Patel; Kevin Lee; David M Wilson
Journal:  Nature       Date:  2012-08-16       Impact factor: 49.962

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  38 in total

1.  Histone demethylase UTX is a therapeutic target for diabetic kidney disease.

Authors:  Hong Chen; Yixue Huang; Xiuqin Zhu; Chong Liu; Yangmian Yuan; Hua Su; Chun Zhang; Chengyu Liu; Mingrui Xiong; Yannan Qu; Peng Yun; Ling Zheng; Kun Huang
Journal:  J Physiol       Date:  2018-12-25       Impact factor: 5.182

Review 2.  Epigenetics and epigenomics in diabetic kidney disease and metabolic memory.

Authors:  Mitsuo Kato; Rama Natarajan
Journal:  Nat Rev Nephrol       Date:  2019-06       Impact factor: 28.314

3.  DACH1 protects podocytes from experimental diabetic injury and modulates PTIP-H3K4Me3 activity.

Authors:  Aili Cao; Jianhua Li; Morad Asadi; John M Basgen; Bingbing Zhu; Zhengzi Yi; Song Jiang; Tomohito Doke; Osama El Shamy; Niralee Patel; Paolo Cravedi; Evren U Azeloglu; Kirk N Campbell; Madhav Menon; Steve Coca; Weijia Zhang; Hao Wang; Ke Zen; Zhihong Liu; Barbara Murphy; John C He; Vivette D D'Agati; Katalin Susztak; Lewis Kaufman
Journal:  J Clin Invest       Date:  2021-05-17       Impact factor: 14.808

4.  Epigenetics: H3K27me3 in glomerular disease.

Authors:  Susan J Allison
Journal:  Nat Rev Nephrol       Date:  2018-01-15       Impact factor: 28.314

5.  Dysregulated expression but redundant function of the long non-coding RNA HOTAIR in diabetic kidney disease.

Authors:  Syamantak Majumder; Mitchell J Hadden; Karina Thieme; Sri N Batchu; Divya Niveditha; Shibasish Chowdhury; Veera Ganesh Yerra; Suzanne L Advani; Bridgit B Bowskill; Youan Liu; Hana Vakili; Tamadher A Alghamdi; Kathryn E White; Laurette Geldenhuys; Ferhan S Siddiqi; Andrew Advani
Journal:  Diabetologia       Date:  2019-08-09       Impact factor: 10.122

6.  Dysregulation of histone H3 lysine 27 trimethylation in transforming growth factor-β1-induced gene expression in mesangial cells and diabetic kidney.

Authors:  Ye Jia; Marpadga A Reddy; Sadhan Das; Hyung Jung Oh; Maryam Abdollahi; Hang Yuan; Erli Zhang; Linda Lanting; Mei Wang; Rama Natarajan
Journal:  J Biol Chem       Date:  2019-07-02       Impact factor: 5.157

7.  Discovery of the First-in-Class G9a/GLP Covalent Inhibitors.

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Journal:  J Med Chem       Date:  2022-06-28       Impact factor: 8.039

8.  Targeted disruption of the histone lysine 79 methyltransferase Dot1L in nephron progenitors causes congenital renal dysplasia.

Authors:  Fenglin Wang; Jenny Ngo; Yuwen Li; Hongbing Liu; Chao-Hui Chen; Zubaida Saifudeen; Maria Luisa S Sequeira-Lopez; Samir S El-Dahr
Journal:  Epigenetics       Date:  2020-12-29       Impact factor: 4.528

Review 9.  The study of single cells in diabetic kidney disease.

Authors:  Harmandeep Kaur; Andrew Advani
Journal:  J Nephrol       Date:  2021-01-21       Impact factor: 3.902

10.  Restoration of H3k27me3 Modification Epigenetically Silences Cry1 Expression and Sensitizes Leptin Signaling to Reduce Obesity-Related Properties.

Authors:  Yan Wei; Jun Chen; Xing Xu; Fan Li; Kun Wu; Yingying Jiang; Yuqing Rao; Chen Zhao; Wantao Chen; Xu Wang
Journal:  Adv Sci (Weinh)       Date:  2021-05-13       Impact factor: 16.806

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