Literature DB >> 29226284

Gray Matter Surface based Spatial Statistics (GS-BSS) in Diffusion Microstructure.

Prasanna Parvathaneni1, Baxter P Rogers2, Yuankai Huo1, Kurt G Schilling2, Allison E Hainline3, Adam W Anderson2, Neil D Woodward4, Bennett A Landman1,2,4.   

Abstract

Tract-based spatial statistics (TBSS) has proven to be a popular technique for performing voxel-wise statistical analysis that aims to improve sensitivity and interpretability of analysis of multi-subject diffusion imaging studies in white matter. With the advent of advanced diffusion MRI models - e.g., the neurite orientation dispersion density imaging (NODDI), it is of interest to analyze microstructural changes within gray matter (GM). A recent study has proposed using NODDI in gray matter based spatial statistics (N-GBSS) to perform voxel-wise statistical analysis on GM microstructure. N-GBSS adapts TBSS by skeletonizing the GM and projecting diffusion metrics to a cortical ribbon. In this study, we propose an alternate approach, known as gray matter surface based spatial statistics (GS-BSS), to perform statistical analysis using gray matter surfaces by incorporating established methods of registration techniques of GM surface segmentation on structural images. Diffusion microstructure features from NODDI and GM surfaces are transferred to standard space. All the surfaces are then projected onto a common GM surface non-linearly using diffeomorphic spectral matching on cortical surfaces. Prior post-mortem studies have shown reduced dendritic length in prefrontal cortex region in schizophrenia and bipolar disorder population. To validate the results, statistical tests are compared between GS-BSS and N-GBSS to study the differences between healthy and psychosis population. Significant results confirming the microstructural changes are presented. GS-BSS results show higher sensitivity to group differences between healthy and psychosis population in previously known regions.

Entities:  

Keywords:  Gray matter surface based analysis; NODDI; brain microstructure

Mesh:

Year:  2017        PMID: 29226284      PMCID: PMC5722235          DOI: 10.1007/978-3-319-66182-7_73

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  12 in total

1.  Improved optimization for the robust and accurate linear registration and motion correction of brain images.

Authors:  Mark Jenkinson; Peter Bannister; Michael Brady; Stephen Smith
Journal:  Neuroimage       Date:  2002-10       Impact factor: 6.556

2.  A fast diffeomorphic image registration algorithm.

Authors:  John Ashburner
Journal:  Neuroimage       Date:  2007-07-18       Impact factor: 6.556

3.  Functional consequences of neurite orientation dispersion and density in humans across the adult lifespan.

Authors:  Arash Nazeri; M Mallar Chakravarty; David J Rotenberg; Tarek K Rajji; Yogesh Rathi; Oleg V Michailovich; Aristotle N Voineskos
Journal:  J Neurosci       Date:  2015-01-28       Impact factor: 6.167

4.  Methodological considerations on tract-based spatial statistics (TBSS).

Authors:  Michael Bach; Frederik B Laun; Alexander Leemans; Chantal M W Tax; Geert J Biessels; Bram Stieltjes; Klaus H Maier-Hein
Journal:  Neuroimage       Date:  2014-06-16       Impact factor: 6.556

5.  Diffeomorphic spectral matching of cortical surfaces.

Authors:  Herve Lombaert; Jon Sporring; Kaleem Siddiqi
Journal:  Inf Process Med Imaging       Date:  2013

6.  Prefrontal cortical dendritic spine pathology in schizophrenia and bipolar disorder.

Authors:  Glenn T Konopaske; Nicholas Lange; Joseph T Coyle; Francine M Benes
Journal:  JAMA Psychiatry       Date:  2014-12-01       Impact factor: 21.596

7.  Deficits in Neurite Density Underlie White Matter Structure Abnormalities in First-Episode Psychosis.

Authors:  Charlotte L Rae; Geoff Davies; Sarah N Garfinkel; Matt C Gabel; Nicholas G Dowell; Mara Cercignani; Anil K Seth; Kathryn E Greenwood; Nick Medford; Hugo D Critchley
Journal:  Biol Psychiatry       Date:  2017-02-17       Impact factor: 13.382

8.  Consistent cortical reconstruction and multi-atlas brain segmentation.

Authors:  Yuankai Huo; Andrew J Plassard; Aaron Carass; Susan M Resnick; Dzung L Pham; Jerry L Prince; Bennett A Landman
Journal:  Neuroimage       Date:  2016-05-13       Impact factor: 6.556

9.  Reduced dendritic spine density on cerebral cortical pyramidal neurons in schizophrenia.

Authors:  L J Garey; W Y Ong; T S Patel; M Kanani; A Davis; A M Mortimer; T R Barnes; S R Hirsch
Journal:  J Neurol Neurosurg Psychiatry       Date:  1998-10       Impact factor: 10.154

10.  Tract-based spatial statistics: voxelwise analysis of multi-subject diffusion data.

Authors:  Stephen M Smith; Mark Jenkinson; Heidi Johansen-Berg; Daniel Rueckert; Thomas E Nichols; Clare E Mackay; Kate E Watkins; Olga Ciccarelli; M Zaheer Cader; Paul M Matthews; Timothy E J Behrens
Journal:  Neuroimage       Date:  2006-04-19       Impact factor: 6.556

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  4 in total

1.  Improved gray matter surface based spatial statistics in neuroimaging studies.

Authors:  Prasanna Parvathaneni; Ilwoo Lyu; Yuankai Huo; Baxter P Rogers; Kurt G Schilling; Vishwesh Nath; Justin A Blaber; Allison E Hainline; Adam W Anderson; Neil D Woodward; Bennett A Landman
Journal:  Magn Reson Imaging       Date:  2019-05-22       Impact factor: 2.546

2.  Improved Stability of Whole Brain Surface Parcellation with Multi-Atlas Segmentation.

Authors:  Yuankai Huo; Shunxing Bao; Prasanna Parvathaneni; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-03

Review 3.  Emerging Magnetic Resonance Imaging Techniques and Analysis Methods in Amyotrophic Lateral Sclerosis.

Authors:  Andrew W Barritt; Matt C Gabel; Mara Cercignani; P Nigel Leigh
Journal:  Front Neurol       Date:  2018-12-04       Impact factor: 4.003

Review 4.  Towards Portable Large-Scale Image Processing with High-Performance Computing.

Authors:  Yuankai Huo; Justin Blaber; Stephen M Damon; Brian D Boyd; Shunxing Bao; Prasanna Parvathaneni; Camilo Bermudez Noguera; Shikha Chaganti; Vishwesh Nath; Jasmine M Greer; Ilwoo Lyu; William R French; Allen T Newton; Baxter P Rogers; Bennett A Landman
Journal:  J Digit Imaging       Date:  2018-06       Impact factor: 4.056

  4 in total

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