Literature DB >> 29226251

Tissue-based biomarkers in prostate cancer.

Timothy N Clinton1, Aditya Bagrodia1, Yair Lotan1, Vitaly Margulis1, Ganesh V Raj1, Solomon L Woldu1.   

Abstract

INTRODUCTION: Prostate cancer is a heterogeneous disease. Existing risk stratification tools based on standard clinlicopathologic variables (prostate specific antigen [PSA], Gleason score, and tumor stage) provide a modest degree of predictive ability. Advances in high-throughput sequencing has led to the development of several novel tissue-based biomarkers that can improve prognostication in prostate cancer management. AREAS COVERED: The authors review commercially-available, tissue-based biomarker assays that improve upon existing risk-stratification tools in several areas of prostate cancer management, including the appropriateness of active surveillance and aiding in decision making regarding the use of adjuvant therapy. Additionally, some of the obstacles to the widespread adoption of these biomarkers and discuss several investigational sources of new biomarkers are discussed. EXPERT COMMENTARY: Work is ongoing to answer pertinent clinical questions in prostate cancer management including which patients should undergo biopsy, active surveillance, receive adjuvant therapy, and what systemic therapy is best in the first-line. Incorporation into novel biomarkers may allow for the incorporation of a 'personalized' approach to management. Further validation will be required and questions of cost must be considered before wide scale adoption of these biomarkers. Tumor heterogeneity may impose a ceiling on the prognostic ability of biomarkers using currently available techniques.

Entities:  

Keywords:  active surveillance; adjuvant therapy; biomarker; genomics; prostate cancer

Year:  2017        PMID: 29226251      PMCID: PMC5722240          DOI: 10.1080/23808993.2017.1372687

Source DB:  PubMed          Journal:  Expert Rev Precis Med Drug Dev        ISSN: 2380-8993


  122 in total

1.  Prognostic value of an RNA expression signature derived from cell cycle proliferation genes in patients with prostate cancer: a retrospective study.

Authors:  Jack Cuzick; Gregory P Swanson; Gabrielle Fisher; Arthur R Brothman; Daniel M Berney; Julia E Reid; David Mesher; V O Speights; Elzbieta Stankiewicz; Christopher S Foster; Henrik Møller; Peter Scardino; Jorja D Warren; Jimmy Park; Adib Younus; Darl D Flake; Susanne Wagner; Alexander Gutin; Jerry S Lanchbury; Steven Stone
Journal:  Lancet Oncol       Date:  2011-03       Impact factor: 41.316

2.  A large multiethnic genome-wide association study of prostate cancer identifies novel risk variants and substantial ethnic differences.

Authors:  Thomas J Hoffmann; Stephen K Van Den Eeden; Lori C Sakoda; Eric Jorgenson; Laurel A Habel; Rebecca E Graff; Michael N Passarelli; Clinton L Cario; Nima C Emami; Chun R Chao; Nirupa R Ghai; Jun Shan; Dilrini K Ranatunga; Charles P Quesenberry; David Aaronson; Joseph Presti; Zhaoming Wang; Sonja I Berndt; Stephen J Chanock; Shannon K McDonnell; Amy J French; Daniel J Schaid; Stephen N Thibodeau; Qiyuan Li; Matthew L Freedman; Kathryn L Penney; Lorelei A Mucci; Christopher A Haiman; Brian E Henderson; Daniela Seminara; Mark N Kvale; Pui-Yan Kwok; Catherine Schaefer; Neil Risch; John S Witte
Journal:  Cancer Discov       Date:  2015-06-01       Impact factor: 39.397

3.  Genomic deletion of PTEN is associated with tumor progression and early PSA recurrence in ERG fusion-positive and fusion-negative prostate cancer.

Authors:  Antje Krohn; Tobias Diedler; Lia Burkhardt; Pascale-Sophie Mayer; Colin De Silva; Marie Meyer-Kornblum; Darja Kötschau; Pierre Tennstedt; Joseph Huang; Clarissa Gerhäuser; Malte Mader; Stefan Kurtz; Hüseyin Sirma; Fred Saad; Thomas Steuber; Markus Graefen; Christoph Plass; Guido Sauter; Ronald Simon; Sarah Minner; Thorsten Schlomm
Journal:  Am J Pathol       Date:  2012-06-13       Impact factor: 4.307

4.  Associations of Luminal and Basal Subtyping of Prostate Cancer With Prognosis and Response to Androgen Deprivation Therapy.

Authors:  Shuang G Zhao; S Laura Chang; Nicholas Erho; Menggang Yu; Jonathan Lehrer; Mohammed Alshalalfa; Corey Speers; Matthew R Cooperberg; Won Kim; Charles J Ryan; Robert B Den; Stephen J Freedland; Edwin Posadas; Howard Sandler; Eric A Klein; Peter Black; Roland Seiler; Scott A Tomlins; Arul M Chinnaiyan; Robert B Jenkins; Elai Davicioni; Ashley E Ross; Edward M Schaeffer; Paul L Nguyen; Peter R Carroll; R Jeffrey Karnes; Daniel E Spratt; Felix Y Feng
Journal:  JAMA Oncol       Date:  2017-12-01       Impact factor: 31.777

5.  Prospective Validation of Diagnostic Tumor Biomarkers in Men Treated With Radiotherapy for Prostate Cancer.

Authors:  Alan Pollack; Deukwoo Kwon; Gail Walker; Li Yan Khor; Eric M Horwitz; Mark K Buyyounouski; Radka Stoyanova
Journal:  J Natl Cancer Inst       Date:  2017-02-01       Impact factor: 13.506

6.  Cell cycle progression score and treatment decisions in prostate cancer: results from an ongoing registry.

Authors:  E David Crawford; Mark C Scholz; Ashok J Kar; Jeffrey E Fegan; Abebe Haregewoin; Rajesh R Kaldate; Michael K Brawer
Journal:  Curr Med Res Opin       Date:  2014-03-13       Impact factor: 2.580

7.  Poor prognosis in carcinoma is associated with a gene expression signature of aberrant PTEN tumor suppressor pathway activity.

Authors:  Lao H Saal; Peter Johansson; Karolina Holm; Sofia K Gruvberger-Saal; Qing-Bai She; Matthew Maurer; Susan Koujak; Adolfo A Ferrando; Per Malmström; Lorenzo Memeo; Jorma Isola; Pär-Ola Bendahl; Neal Rosen; Hanina Hibshoosh; Markus Ringnér; Ake Borg; Ramon Parsons
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-23       Impact factor: 11.205

8.  Validation of a cell-cycle progression gene panel to improve risk stratification in a contemporary prostatectomy cohort.

Authors:  Matthew R Cooperberg; Jeffry P Simko; Janet E Cowan; Julia E Reid; Azita Djalilvand; Satish Bhatnagar; Alexander Gutin; Jerry S Lanchbury; Gregory P Swanson; Steven Stone; Peter R Carroll
Journal:  J Clin Oncol       Date:  2013-03-04       Impact factor: 44.544

9.  Discovery and validation of a prostate cancer genomic classifier that predicts early metastasis following radical prostatectomy.

Authors:  Nicholas Erho; Anamaria Crisan; Ismael A Vergara; Anirban P Mitra; Mercedeh Ghadessi; Christine Buerki; Eric J Bergstralh; Thomas Kollmeyer; Stephanie Fink; Zaid Haddad; Benedikt Zimmermann; Thomas Sierocinski; Karla V Ballman; Timothy J Triche; Peter C Black; R Jeffrey Karnes; George Klee; Elai Davicioni; Robert B Jenkins
Journal:  PLoS One       Date:  2013-06-24       Impact factor: 3.240

10.  Decipher correlation patterns post prostatectomy: initial experience from 2 342 prospective patients.

Authors:  R B Den; M Santiago-Jimenez; J Alter; M Schliekelman; J R Wagner; J F Renzulli Ii; D I Lee; C G Brito; K Monahan; B Gburek; N Kella; G Vallabhan; F Abdollah; E J Trabulsi; C D Lallas; L G Gomella; T L Woodlief; Z Haddad; L L C Lam; S Deheshi; Q Wang; V Choeurng; M du Plessis; J Jordan; B Parks; H Shin; C Buerki; K Yousefi; E Davicioni; V R Patel; N L Shah
Journal:  Prostate Cancer Prostatic Dis       Date:  2016-08-30       Impact factor: 5.554

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  9 in total

Review 1.  Prebiopsy 68Ga-PSMA PET imaging: can we improve the current diagnostic pathway for prostate cancer?

Authors:  Simone Albisinni; Julien Sarkis; Romain Diamand; Cosimo De Nunzio
Journal:  Prostate Cancer Prostatic Dis       Date:  2022-09-09       Impact factor: 5.455

2.  Transcriptomic heterogeneity in multifocal prostate cancer.

Authors:  Simpa S Salami; Daniel H Hovelson; Jeremy B Kaplan; Romain Mathieu; Aaron M Udager; Nicole E Curci; Matthew Lee; Komal R Plouffe; Lorena Lazo de la Vega; Martin Susani; Nathalie Rioux-Leclercq; Daniel E Spratt; Todd M Morgan; Matthew S Davenport; Arul M Chinnaiyan; Joanna Cyrta; Mark A Rubin; Shahrokh F Shariat; Scott A Tomlins; Ganesh S Palapattu
Journal:  JCI Insight       Date:  2018-11-02

3.  Random forest-based modelling to detect biomarkers for prostate cancer progression.

Authors:  Reka Toth; Heiko Schiffmann; Claudia Hube-Magg; Franziska Büscheck; Doris Höflmayer; Sören Weidemann; Patrick Lebok; Christoph Fraune; Sarah Minner; Thorsten Schlomm; Guido Sauter; Christoph Plass; Yassen Assenov; Ronald Simon; Jan Meiners; Clarissa Gerhäuser
Journal:  Clin Epigenetics       Date:  2019-10-22       Impact factor: 6.551

Review 4.  Volatilomics: An Emerging and Promising Avenue for the Detection of Potential Prostate Cancer Biomarkers.

Authors:  Cristina V Berenguer; Ferdinando Pereira; Jorge A M Pereira; José S Câmara
Journal:  Cancers (Basel)       Date:  2022-08-17       Impact factor: 6.575

5.  Comprehensive methylome sequencing reveals prognostic epigenetic biomarkers for prostate cancer mortality.

Authors:  Ruth Pidsley; Dilys Lam; Wenjia Qu; Timothy J Peters; Phuc-Loi Luu; Darren Korbie; Clare Stirzaker; Roger J Daly; Phillip Stricker; James G Kench; Lisa G Horvath; Susan J Clark
Journal:  Clin Transl Med       Date:  2022-10

Review 6.  Tissue-Based Biomarkers for the Risk Stratification of Men With Clinically Localized Prostate Cancer.

Authors:  Spyridon P Basourakos; Michael Tzeng; Patrick J Lewicki; Krishnan Patel; Bashir Al Hussein Al Awamlh; Siv Venkat; Jonathan E Shoag; Michael A Gorin; Christopher E Barbieri; Jim C Hu
Journal:  Front Oncol       Date:  2021-05-28       Impact factor: 6.244

Review 7.  Genome-Based Classification and Therapy of Prostate Cancer.

Authors:  Arlou Kristina Angeles; Simone Bauer; Leonie Ratz; Sabine M Klauck; Holger Sültmann
Journal:  Diagnostics (Basel)       Date:  2018-09-02

Review 8.  Entering an era of radiogenomics in prostate cancer risk stratification.

Authors:  Nachiketh Soodana-Prakash; Radka Stoyanova; Abhishek Bhat; Maria C Velasquez; Omer E Kineish; Alan Pollack; Dipen J Parekh; Sanoj Punnen
Journal:  Transl Androl Urol       Date:  2018-09

Review 9.  The PTEN Conundrum: How to Target PTEN-Deficient Prostate Cancer.

Authors:  Daniel J Turnham; Nicholas Bullock; Manisha S Dass; John N Staffurth; Helen B Pearson
Journal:  Cells       Date:  2020-10-22       Impact factor: 6.600

  9 in total

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