Literature DB >> 29224923

Allele-specific methylation of type 1 diabetes susceptibility genes.

Alida S D Kindt1, Rainer W Fuerst2, Jan Knoop3, Michael Laimighofer4, Tanja Telieps5, Markus Hippich6, Maria A Woerheide7, Simone Wahl8, Rory Wilson9, Eva-Maria Sedlmeier10, Angela Hommel11, John A Todd12, Jan Krumsiek13, Anette-G Ziegler14, Ezio Bonifacio15.   

Abstract

The susceptibility to autoimmune diseases is influenced by genes encoding major histocompatibility complex (MHC) proteins. By examining the epigenetic methylation maps of cord blood samples, we found marked differences in the methylation status of CpG sites within the MHC genes (cis-metQTLs) between carriers of the type 1 diabetes risk haplotypes HLA-DRB1*03-DQA1*0501-DQB1*0201 (DR3-DQ2) and HLA-DRB1*04-DQA1*0301-DQB1*0302 (DR4-DQ8). These differences were found in children and adults, and were accompanied by reduced HLA-DR protein expression in immune cells with the HLA-DR3-DQ2 haplotype. Extensive cis-metQTLs were identified in all 45 immune and non-immune type 1 diabetes susceptibility genes analyzed in this study. We observed and validated a novel association between the methylation status of CpG sites within the LDHC gene and the development of insulin autoantibodies in early childhood in children who are carriers of the highest type 1 diabetes risk genotype. Functionally relevant epigenetic changes in susceptibility genes may represent therapeutic targets for type 1 diabetes.
Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

Entities:  

Keywords:  Autoimmunity; Epigenetics; HLA; Insulin autoantibodies; Insulin gene; Lactate dehydrogenase C

Mesh:

Substances:

Year:  2017        PMID: 29224923     DOI: 10.1016/j.jaut.2017.11.008

Source DB:  PubMed          Journal:  J Autoimmun        ISSN: 0896-8411            Impact factor:   7.094


  9 in total

Review 1.  100 Years of Insulin: Lifesaver, immune target, and potential remedy for prevention.

Authors:  Anette-Gabriele Ziegler; Thomas Danne; Carolin Daniel; Ezio Bonifacio
Journal:  Med (N Y)       Date:  2021-09-15

2.  Genetic associations at regulatory phenotypes improve fine-mapping of causal variants for 12 immune-mediated diseases.

Authors:  Kousik Kundu; Manuel Tardaguila; Alice L Mann; Stephen Watt; Hannes Ponstingl; Louella Vasquez; Dominique Von Schiller; Nicholas W Morrell; Oliver Stegle; Tomi Pastinen; Stephen J Sawcer; Carl A Anderson; Klaudia Walter; Nicole Soranzo
Journal:  Nat Genet       Date:  2022-03-14       Impact factor: 41.307

3.  DNA methylation near the INS gene is associated with INS genetic variation (rs689) and type 1 diabetes in the Diabetes Autoimmunity Study in the Young.

Authors:  Patrick M Carry; Lauren A Vanderlinden; Randi K Johnson; Fran Dong; Andrea K Steck; Brigitte I Frohnert; Marian Rewers; Ivana V Yang; Katerina Kechris; Jill M Norris
Journal:  Pediatr Diabetes       Date:  2020-02-28       Impact factor: 4.866

Review 4.  Immunological biomarkers for the development and progression of type 1 diabetes.

Authors:  Chantal Mathieu; Riitta Lahesmaa; Ezio Bonifacio; Peter Achenbach; Timothy Tree
Journal:  Diabetologia       Date:  2018-09-12       Impact factor: 10.122

5.  Modelling pancreatic β-cell inflammation in zebrafish identifies the natural product wedelolactone for human islet protection.

Authors:  Luis Fernando Delgadillo-Silva; Anastasia Tsakmaki; Nadeem Akhtar; Zara J Franklin; Judith Konantz; Gavin A Bewick; Nikolay Ninov
Journal:  Dis Model Mech       Date:  2019-01-23       Impact factor: 5.758

6.  S100A6 Promotes B Lymphocyte Penetration Through the Blood-Brain Barrier in Autoimmune Encephalitis.

Authors:  Meng-Han Tsai; Chih-Hsiang Lin; Kuo-Wang Tsai; Ming-Hong Lin; Chen-Jui Ho; Yan-Ting Lu; Ken-Pen Weng; Yuyu Lin; Pei-Hsien Lin; Sung-Chou Li
Journal:  Front Genet       Date:  2019-11-22       Impact factor: 4.599

7.  DNA Methylomes and Epigenetic Age Acceleration Associations with Poor Metabolic Control in T1D.

Authors:  Raúl F Pérez; Juan Luis Fernandez-Morera; Judit Romano-Garcia; Edelmiro Menendez-Torre; Elias Delgado-Alvarez; Mario F Fraga; Agustin F Fernandez
Journal:  Biomedicines       Date:  2020-12-24

Review 8.  The Interplay Between Diet and the Epigenome in the Pathogenesis of Type-1 Diabetes.

Authors:  Amira Kohil; Maha Al-Asmakh; Mashael Al-Shafai; Annalisa Terranegra
Journal:  Front Nutr       Date:  2021-01-28

Review 9.  Epigenetic modifications in pancreas development, diabetes, and therapeutics.

Authors:  Suneesh Kaimala; Challagandla Anil Kumar; Mohammed Z Allouh; Suraiya Anjum Ansari; Bright Starling Emerald
Journal:  Med Res Rev       Date:  2022-01-04       Impact factor: 12.388

  9 in total

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