Literature DB >> 2922278

Liver cell specific gene transcription in vitro: the promoter elements HP1 and TATA box are necessary and sufficient to generate a liver-specific promoter.

G U Ryffel1, W Kugler, U Wagner, M Kaling.   

Abstract

The hepatocyte-specific promoter element HP1, which is present in several genes specifically expressed in the liver, is active in an in vitro transcription system. The liver-specificity is retained in the in vitro system, as the activity is found in extracts of rat liver or hepatoma cells but is absent in an L-cell extract. Mutational analysis identifies HP1 as a 13 bp element: Two point mutations abolish the function of HP1. This inactivation is correlated with a reduced binding affinity of the transcription factors recognizing HP1. Two other mutants, which reduce the activity of HP1, bind the transcription factors with an affinity identical to the wildtype sequence. This suggests that the binding of the transcription factors is not sufficient for activation of HP1 dependent transcription. The function of HP1 depends on the presence of a TATA box within a distance of some 70 bp. Various TATA sequences are functional and no stereospecific alignment between HP1 and the TATA box is required.

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Year:  1989        PMID: 2922278      PMCID: PMC331714          DOI: 10.1093/nar/17.3.939

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  34 in total

1.  Requirement of stereospecific alignments for initiation from the simian virus 40 early promoter.

Authors:  K Takahashi; M Vigneron; H Matthes; A Wildeman; M Zenke; P Chambon
Journal:  Nature       Date:  1986 Jan 9-15       Impact factor: 49.962

2.  Fine structure genetic analysis of a beta-globin promoter.

Authors:  R M Myers; K Tilly; T Maniatis
Journal:  Science       Date:  1986-05-02       Impact factor: 47.728

3.  Factors involved in control of tissue-specific expression of albumin gene.

Authors:  S Cereghini; M Raymondjean; A G Carranca; P Herbomel; M Yaniv
Journal:  Cell       Date:  1987-08-14       Impact factor: 41.582

4.  Factors involved in specific transcription by human RNA polymerase II: analysis by a rapid and quantitative in vitro assay.

Authors:  M Sawadogo; R G Roeder
Journal:  Proc Natl Acad Sci U S A       Date:  1985-07       Impact factor: 11.205

Review 5.  Organization and expression of eucaryotic split genes coding for proteins.

Authors:  R Breathnach; P Chambon
Journal:  Annu Rev Biochem       Date:  1981       Impact factor: 23.643

6.  Supercoil sequencing: a fast and simple method for sequencing plasmid DNA.

Authors:  E Y Chen; P H Seeburg
Journal:  DNA       Date:  1985-04

7.  A pituitary-specific trans-acting factor can stimulate transcription from the growth hormone promoter in extracts of nonexpressing cells.

Authors:  M Bodner; M Karin
Journal:  Cell       Date:  1987-07-17       Impact factor: 41.582

8.  Sequence homologies in the region preceding the transcription initiation site of the liver estrogen-responsive vitellogenin and apo-VLDLII genes.

Authors:  P Walker; J E Germond; M Brown-Luedi; F Givel; W Wahli
Journal:  Nucleic Acids Res       Date:  1984-11-26       Impact factor: 16.971

9.  Tissue-specific in vitro transcription from the mouse albumin promoter.

Authors:  K Gorski; M Carneiro; U Schibler
Journal:  Cell       Date:  1986-12-05       Impact factor: 41.582

10.  A cell-specific activator in the Xenopus A2 vitellogenin gene: promoter elements functioning with rat liver nuclear extracts.

Authors:  U Döbbeling; K Ross; L Klein-Hitpass; C Morley; U Wagner; G U Ryffel
Journal:  EMBO J       Date:  1988-08       Impact factor: 11.598

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  20 in total

1.  The binding site for the liver-specific transcription factor Tf-LF1 and the TATA box of the human transferrin gene promoter are the only elements necessary to direct liver-specific transcription in vitro.

Authors:  D Mendelzon; F Boissier; M M Zakin
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

2.  The rat albumin promoter: cooperation with upstream elements is required when binding of APF/HNF1 to the proximal element is partially impaired by mutation or bacterial methylation.

Authors:  F Tronche; A Rollier; I Bach; M C Weiss; M Yaniv
Journal:  Mol Cell Biol       Date:  1989-11       Impact factor: 4.272

3.  Two types of antiprogestins identified by their differential action in transcriptionally active extracts from T47D cells.

Authors:  L Klein-Hitpass; A C Cato; D Henderson; G U Ryffel
Journal:  Nucleic Acids Res       Date:  1991-03-25       Impact factor: 16.971

4.  The E-cadherin promoter: functional analysis of a G.C-rich region and an epithelial cell-specific palindromic regulatory element.

Authors:  J Behrens; O Löwrick; L Klein-Hitpass; W Birchmeier
Journal:  Proc Natl Acad Sci U S A       Date:  1991-12-15       Impact factor: 11.205

5.  Cis- and trans-acting elements required for constitutive and cytokine-regulated expression of the mouse complement C3 gene.

Authors:  N Kawamura; L Singer; R A Wetsel; H R Colten
Journal:  Biochem J       Date:  1992-05-01       Impact factor: 3.857

6.  Shared promoter elements between a viral superantigen and the major histocompatibility complex class II-associated invariant chain.

Authors:  J Arroyo; E Winchester; B S McLellan; B T Huber
Journal:  J Virol       Date:  1997-02       Impact factor: 5.103

7.  Expression of podoplanin in human astrocytic brain tumors is controlled by the PI3K-AKT-AP-1 signaling pathway and promoter methylation.

Authors:  Heike Peterziel; Julia Müller; Andreas Danner; Sebastian Barbus; Hai-Kun Liu; Bernhard Radlwimmer; Torsten Pietsch; Peter Lichter; Günther Schütz; Jochen Hess; Peter Angel
Journal:  Neuro Oncol       Date:  2012-03-06       Impact factor: 12.300

8.  A distal dimerization domain is essential for DNA-binding by the atypical HNF1 homeodomain.

Authors:  T Chouard; M Blumenfeld; I Bach; J Vandekerckhove; S Cereghini; M Yaniv
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

9.  Interleukin-6-induced STAT3 and AP-1 amplify hepatocyte nuclear factor 1-mediated transactivation of hepatic genes, an adaptive response to liver injury.

Authors:  J I Leu; M A Crissey; J P Leu; G Ciliberto; R Taub
Journal:  Mol Cell Biol       Date:  2001-01       Impact factor: 4.272

10.  Promoter-specific transactivation of hepatitis B virus transcription by a glutamine- and proline-rich domain of hepatocyte nuclear factor 1.

Authors:  A K Raney; A J Easton; D R Milich; A McLachlan
Journal:  J Virol       Date:  1991-11       Impact factor: 5.103

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