Literature DB >> 29220074

Prediction of Protein-Protein Interactions.

Max Kotlyar1, Andrea E M Rossos1, Igor Jurisica1,2,3.   

Abstract

The authors provide an overview of physical protein-protein interaction prediction, covering the main strategies for predicting interactions, approaches for assessing predictions, and online resources for accessing predictions. This unit focuses on the main advancements in each of these areas over the last decade. The methods and resources that are presented here are not an exhaustive set, but characterize the current state of the field-highlighting key challenges and achievements. © 2017 by John Wiley & Sons, Inc.
Copyright © 2017 John Wiley & Sons, Inc.

Keywords:  bioinformatics; interaction networks; machine learning; protein interactions

Mesh:

Year:  2017        PMID: 29220074     DOI: 10.1002/cpbi.38

Source DB:  PubMed          Journal:  Curr Protoc Bioinformatics        ISSN: 1934-3396


  7 in total

Review 1.  Molecular networks in Network Medicine: Development and applications.

Authors:  Edwin K Silverman; Harald H H W Schmidt; Eleni Anastasiadou; Lucia Altucci; Marco Angelini; Lina Badimon; Jean-Luc Balligand; Giuditta Benincasa; Giovambattista Capasso; Federica Conte; Antonella Di Costanzo; Lorenzo Farina; Giulia Fiscon; Laurent Gatto; Michele Gentili; Joseph Loscalzo; Cinzia Marchese; Claudio Napoli; Paola Paci; Manuela Petti; John Quackenbush; Paolo Tieri; Davide Viggiano; Gemma Vilahur; Kimberly Glass; Jan Baumbach
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2020-04-19

2.  Protein-Protein Interactions Efficiently Modeled by Residue Cluster Classes.

Authors:  Albros Hermes Poot Velez; Fernando Fontove; Gabriel Del Rio
Journal:  Int J Mol Sci       Date:  2020-07-06       Impact factor: 5.923

Review 3.  Targeted Intracellular Delivery of Antibodies: The State of the Art.

Authors:  Tatiana A Slastnikova; A V Ulasov; A A Rosenkranz; A S Sobolev
Journal:  Front Pharmacol       Date:  2018-10-24       Impact factor: 5.810

4.  Computationally Reconstructed Interactome of Bradyrhizobium diazoefficiens USDA110 Reveals Novel Functional Modules and Protein Hubs for Symbiotic Nitrogen Fixation.

Authors:  Jun-Xiao Ma; Yi Yang; Guang Li; Bin-Guang Ma
Journal:  Int J Mol Sci       Date:  2021-11-02       Impact factor: 5.923

Review 5.  Overview of methods for characterization and visualization of a protein-protein interaction network in a multi-omics integration context.

Authors:  Vivian Robin; Antoine Bodein; Marie-Pier Scott-Boyer; Mickaël Leclercq; Olivier Périn; Arnaud Droit
Journal:  Front Mol Biosci       Date:  2022-09-08

6.  Reciprocal Perspective for Improved Protein-Protein Interaction Prediction.

Authors:  Kevin Dick; James R Green
Journal:  Sci Rep       Date:  2018-08-03       Impact factor: 4.379

7.  Open Data for Differential Network Analysis in Glioma.

Authors:  Claire Jean-Quartier; Fleur Jeanquartier; Andreas Holzinger
Journal:  Int J Mol Sci       Date:  2020-01-15       Impact factor: 5.923

  7 in total

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