Literature DB >> 29220036

The international MAQC Society launches to enhance reproducibility of high-throughput technologies.

Leming Shi1,2, Rebecca Kusko3, Russell D Wolfinger4, Benjamin Haibe-Kains5,6,7, Matthias Fischer8,9, Susanna-Assunta Sansone10, Christopher E Mason11, Cesare Furlanello12, Wendell D Jones13, Baitang Ning14, Weida Tong14.   

Abstract

Entities:  

Mesh:

Year:  2017        PMID: 29220036     DOI: 10.1038/nbt.4029

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


× No keyword cloud information.
  15 in total

1.  Drug development: Raise standards for preclinical cancer research.

Authors:  C Glenn Begley; Lee M Ellis
Journal:  Nature       Date:  2012-03-28       Impact factor: 49.962

2.  The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements.

Authors:  Leming Shi; Laura H Reid; Wendell D Jones; Richard Shippy; Janet A Warrington; Shawn C Baker; Patrick J Collins; Francoise de Longueville; Ernest S Kawasaki; Kathleen Y Lee; Yuling Luo; Yongming Andrew Sun; James C Willey; Robert A Setterquist; Gavin M Fischer; Weida Tong; Yvonne P Dragan; David J Dix; Felix W Frueh; Frederico M Goodsaid; Damir Herman; Roderick V Jensen; Charles D Johnson; Edward K Lobenhofer; Raj K Puri; Uwe Schrf; Jean Thierry-Mieg; Charles Wang; Mike Wilson; Paul K Wolber; Lu Zhang; Shashi Amur; Wenjun Bao; Catalin C Barbacioru; Anne Bergstrom Lucas; Vincent Bertholet; Cecilie Boysen; Bud Bromley; Donna Brown; Alan Brunner; Roger Canales; Xiaoxi Megan Cao; Thomas A Cebula; James J Chen; Jing Cheng; Tzu-Ming Chu; Eugene Chudin; John Corson; J Christopher Corton; Lisa J Croner; Christopher Davies; Timothy S Davison; Glenda Delenstarr; Xutao Deng; David Dorris; Aron C Eklund; Xiao-hui Fan; Hong Fang; Stephanie Fulmer-Smentek; James C Fuscoe; Kathryn Gallagher; Weigong Ge; Lei Guo; Xu Guo; Janet Hager; Paul K Haje; Jing Han; Tao Han; Heather C Harbottle; Stephen C Harris; Eli Hatchwell; Craig A Hauser; Susan Hester; Huixiao Hong; Patrick Hurban; Scott A Jackson; Hanlee Ji; Charles R Knight; Winston P Kuo; J Eugene LeClerc; Shawn Levy; Quan-Zhen Li; Chunmei Liu; Ying Liu; Michael J Lombardi; Yunqing Ma; Scott R Magnuson; Botoul Maqsodi; Tim McDaniel; Nan Mei; Ola Myklebost; Baitang Ning; Natalia Novoradovskaya; Michael S Orr; Terry W Osborn; Adam Papallo; Tucker A Patterson; Roger G Perkins; Elizabeth H Peters; Ron Peterson; Kenneth L Philips; P Scott Pine; Lajos Pusztai; Feng Qian; Hongzu Ren; Mitch Rosen; Barry A Rosenzweig; Raymond R Samaha; Mark Schena; Gary P Schroth; Svetlana Shchegrova; Dave D Smith; Frank Staedtler; Zhenqiang Su; Hongmei Sun; Zoltan Szallasi; Zivana Tezak; Danielle Thierry-Mieg; Karol L Thompson; Irina Tikhonova; Yaron Turpaz; Beena Vallanat; Christophe Van; Stephen J Walker; Sue Jane Wang; Yonghong Wang; Russ Wolfinger; Alex Wong; Jie Wu; Chunlin Xiao; Qian Xie; Jun Xu; Wen Yang; Liang Zhang; Sheng Zhong; Yaping Zong; William Slikker
Journal:  Nat Biotechnol       Date:  2006-09       Impact factor: 54.908

3.  Repeatability of published microarray gene expression analyses.

Authors:  John P A Ioannidis; David B Allison; Catherine A Ball; Issa Coulibaly; Xiangqin Cui; Aedín C Culhane; Mario Falchi; Cesare Furlanello; Laurence Game; Giuseppe Jurman; Jon Mangion; Tapan Mehta; Michael Nitzberg; Grier P Page; Enrico Petretto; Vera van Noort
Journal:  Nat Genet       Date:  2008-01-28       Impact factor: 38.330

4.  SCIENTIFIC INTEGRITY. Self-correction in science at work.

Authors:  Bruce Alberts; Ralph J Cicerone; Stephen E Fienberg; Alexander Kamb; Marcia McNutt; Robert M Nerem; Randy Schekman; Richard Shiffrin; Victoria Stodden; Subra Suresh; Maria T Zuber; Barbara Kline Pope; Kathleen Hall Jamieson
Journal:  Science       Date:  2015-06-26       Impact factor: 47.728

5.  Nextflow enables reproducible computational workflows.

Authors:  Paolo Di Tommaso; Maria Chatzou; Evan W Floden; Pablo Prieto Barja; Emilio Palumbo; Cedric Notredame
Journal:  Nat Biotechnol       Date:  2017-04-11       Impact factor: 54.908

6.  Further confirmation needed.

Authors: 
Journal:  Nat Biotechnol       Date:  2012-09       Impact factor: 54.908

7.  Reproducibility.

Authors:  Marcia McNutt
Journal:  Science       Date:  2014-01-17       Impact factor: 47.728

8.  Policy: NIH plans to enhance reproducibility.

Authors:  Francis S Collins; Lawrence A Tabak
Journal:  Nature       Date:  2014-01-30       Impact factor: 49.962

9.  A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium.

Authors: 
Journal:  Nat Biotechnol       Date:  2014-08-24       Impact factor: 54.908

10.  The FAIR Guiding Principles for scientific data management and stewardship.

Authors:  Mark D Wilkinson; Michel Dumontier; I Jsbrand Jan Aalbersberg; Gabrielle Appleton; Myles Axton; Arie Baak; Niklas Blomberg; Jan-Willem Boiten; Luiz Bonino da Silva Santos; Philip E Bourne; Jildau Bouwman; Anthony J Brookes; Tim Clark; Mercè Crosas; Ingrid Dillo; Olivier Dumon; Scott Edmunds; Chris T Evelo; Richard Finkers; Alejandra Gonzalez-Beltran; Alasdair J G Gray; Paul Groth; Carole Goble; Jeffrey S Grethe; Jaap Heringa; Peter A C 't Hoen; Rob Hooft; Tobias Kuhn; Ruben Kok; Joost Kok; Scott J Lusher; Maryann E Martone; Albert Mons; Abel L Packer; Bengt Persson; Philippe Rocca-Serra; Marco Roos; Rene van Schaik; Susanna-Assunta Sansone; Erik Schultes; Thierry Sengstag; Ted Slater; George Strawn; Morris A Swertz; Mark Thompson; Johan van der Lei; Erik van Mulligen; Jan Velterop; Andra Waagmeester; Peter Wittenburg; Katherine Wolstencroft; Jun Zhao; Barend Mons
Journal:  Sci Data       Date:  2016-03-15       Impact factor: 6.444

View more
  9 in total

Review 1.  Prospects and challenges of multi-omics data integration in toxicology.

Authors:  Sebastian Canzler; Jana Schor; Wibke Busch; Kristin Schubert; Ulrike E Rolle-Kampczyk; Hervé Seitz; Hennicke Kamp; Martin von Bergen; Roland Buesen; Jörg Hackermüller
Journal:  Arch Toxicol       Date:  2020-02-08       Impact factor: 5.153

2.  A cross-sector call to improve carcinogenicity risk assessment through use of genomic methodologies.

Authors:  Carole L Yauk; Alison H Harrill; Heidrun Ellinger-Ziegelbauer; Jan Willem van der Laan; Jonathan Moggs; Roland Froetschl; Frank Sistare; Syril Pettit
Journal:  Regul Toxicol Pharmacol       Date:  2019-11-11       Impact factor: 3.271

3.  X-CNV: genome-wide prediction of the pathogenicity of copy number variations.

Authors:  Li Zhang; Jingru Shi; Jian Ouyang; Riquan Zhang; Yiran Tao; Dongsheng Yuan; Chengkai Lv; Ruiyuan Wang; Baitang Ning; Ruth Roberts; Weida Tong; Zhichao Liu; Tieliu Shi
Journal:  Genome Med       Date:  2021-08-18       Impact factor: 11.117

Review 4.  Current Therapeutic Landscape and Safety Roadmap for Targeting the Aryl Hydrocarbon Receptor in Inflammatory Gastrointestinal Indications.

Authors:  Samantha C Faber; Tejas S Lahoti; Ewan R Taylor; Lauren Lewis; Jessica M Sapiro; Vicencia Toledo Sales; Yvonne P Dragan; Brandon D Jeffy
Journal:  Cells       Date:  2022-05-21       Impact factor: 7.666

5.  Integrative Network Fusion: A Multi-Omics Approach in Molecular Profiling.

Authors:  Marco Chierici; Nicole Bussola; Alessia Marcolini; Margherita Francescatto; Alessandro Zandonà; Lucia Trastulla; Claudio Agostinelli; Giuseppe Jurman; Cesare Furlanello
Journal:  Front Oncol       Date:  2020-06-30       Impact factor: 6.244

6.  FAIRsharing as a community approach to standards, repositories and policies.

Authors:  Susanna-Assunta Sansone; Peter McQuilton; Philippe Rocca-Serra; Alejandra Gonzalez-Beltran; Massimiliano Izzo; Allyson L Lister; Milo Thurston
Journal:  Nat Biotechnol       Date:  2019-04       Impact factor: 54.908

7.  The Sequencing Quality Control 2 study: establishing community standards for sequencing in precision medicine.

Authors:  Tim R Mercer; Joshua Xu; Christopher E Mason; Weida Tong
Journal:  Genome Biol       Date:  2021-11-08       Impact factor: 13.583

Review 8.  Towards accurate and reliable resolution of structural variants for clinical diagnosis.

Authors:  Zhichao Liu; Ruth Roberts; Timothy R Mercer; Joshua Xu; Fritz J Sedlazeck; Weida Tong
Journal:  Genome Biol       Date:  2022-03-03       Impact factor: 17.906

9.  Orchestrating and sharing large multimodal data for transparent and reproducible research.

Authors:  Anthony Mammoliti; Petr Smirnov; Minoru Nakano; Zhaleh Safikhani; Christopher Eeles; Heewon Seo; Sisira Kadambat Nair; Arvind S Mer; Ian Smith; Chantal Ho; Gangesh Beri; Rebecca Kusko; Eva Lin; Yihong Yu; Scott Martin; Marc Hafner; Benjamin Haibe-Kains
Journal:  Nat Commun       Date:  2021-10-04       Impact factor: 14.919

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.