Literature DB >> 29218560

A Successful Combination: Coupling SE-HPLC with SAXS.

Javier Pérez1, Patrice Vachette2.   

Abstract

A monodispersed and ideal solution is a central (unique?) requirement of SAXS to allow one to extract structural information from the recorded pattern. On-line Size Exclusion Chromatography (SEC) marked a major breakthrough, separating particles present in solution according to their size. Identical frames under an elution peak can be averaged and further processed free from contamination. However, this is not always straightforward, separation is often incomplete and software have been developed to deconvolve the contributions from the different species (molecules or oligomeric forms) within the sample. In this chapter, we present the general workflow of a SEC-SAXS experiment. We present recent instrumental and data analysis improvements that have improved the quality of recorded data, extended its potential and turn it into a mainstream approach. We describe into some details two specific applications of SEC-SAXS that provide more than just separating associated forms from the particle of interest.

Keywords:  Membrane protein-detergent complex; Monodispersity; Size exclusion chromatography; Small-angle X-ray scattering

Mesh:

Substances:

Year:  2017        PMID: 29218560     DOI: 10.1007/978-981-10-6038-0_11

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  6 in total

1.  Biophysical characterisation of human LincRNA-p21 sense and antisense Alu inverted repeats.

Authors:  Michael H D'Souza; Tyler Mrozowich; Maulik D Badmalia; Mitchell Geeraert; Angela Frederickson; Amy Henrickson; Borries Demeler; Michael T Wolfinger; Trushar R Patel
Journal:  Nucleic Acids Res       Date:  2022-06-10       Impact factor: 19.160

Review 2.  Evolving SAXS versatility: solution X-ray scattering for macromolecular architecture, functional landscapes, and integrative structural biology.

Authors:  Chris A Brosey; John A Tainer
Journal:  Curr Opin Struct Biol       Date:  2019-06-13       Impact factor: 6.809

3.  Human DDX17 Unwinds Rift Valley Fever Virus Non-Coding RNAs.

Authors:  Corey R Nelson; Tyler Mrozowich; Sean M Park; Simmone D'souza; Amy Henrickson; Justin R J Vigar; Hans-Joachim Wieden; Raymond J Owens; Borries Demeler; Trushar R Patel
Journal:  Int J Mol Sci       Date:  2020-12-23       Impact factor: 5.923

4.  A database of calculated solution parameters for the AlphaFold predicted protein structures.

Authors:  Emre Brookes; Mattia Rocco
Journal:  Sci Rep       Date:  2022-05-05       Impact factor: 4.996

5.  Nanoscale Structure Determination of Murray Valley Encephalitis and Powassan Virus Non-Coding RNAs.

Authors:  Tyler Mrozowich; Amy Henrickson; Borries Demeler; Trushar R Patel
Journal:  Viruses       Date:  2020-02-08       Impact factor: 5.048

6.  Molecular characterization of the RNA-protein complex directing -2/-1 programmed ribosomal frameshifting during arterivirus replicase expression.

Authors:  Ankoor Patel; Emmely E Treffers; Markus Meier; Trushar R Patel; Jörg Stetefeld; Eric J Snijder; Brian L Mark
Journal:  J Biol Chem       Date:  2020-10-30       Impact factor: 5.157

  6 in total

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