| Literature DB >> 29213133 |
Mohammad A Alwashih1,2, David G Watson3, Ruth Andrew4, Roland H Stimson4, Manal Alossaimi1,5, Gavin Blackburn6, Brian R Walker4.
Abstract
Glucocorticoid replacement therapy is the mainstay of treatment for congenital adrenal hyperplasia (CAH) but has a narrow therapeutic index and dose optimisation is challenging. Metabolomic profiling was carried out on plasma samples from 117 adults with 21-hydroxylase deficiency receiving their usual glucocorticoid replacement therapy who were part of the CaHASE study. Samples were profiled by using hydrophilic interaction chromatography with high resolution mass spectrometry. The patients were also profiled using nine routine clinical measures. The data were modelled by using both multivariate and univariate statistics by using the clinical metadata to inform the choice of patient groupings. Comparison of 382 metabolites amongst groups receiving different glucocorticoid doses revealed a clear distinction between patients receiving ≤5 mg (n = 64) and >5 mg (n = 53) daily prednisolone-equivalent doses. The 24 metabolites which were statistically significantly different between groups included free fatty acids, bile acids, and amino acid metabolites. Using 7 metabolites improved the receiver operating characteristic with area under the curve for predicting glucocorticoid dose of >0.9 with FDR adjusted P values in the range 3.3 E-04 -1.9 E-10. A combination of seven plasma metabolite biomarkers readily discriminates supraphysiological glucocorticoid replacement doses in patients with CAH.Entities:
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Year: 2017 PMID: 29213133 PMCID: PMC5719028 DOI: 10.1038/s41598-017-17220-5
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1OPLS-DA score plots showing 117 patients with CAH grouped based on their daily doses of glucocorticoid. (A) Patients divided into 4 groups by daily prednisolone equivalent dose: 1) patients having 1–2.5 mg (green), 2) >2.5–5 mg (blue), 3) >5–7.5 mg (plum) and 4) >7.5–15 mg (orange). (B) Patients divided into 2 groups: 1) 1–5 mg (green-64 samples) and 2) >5–15 mg (blue-53 samples). The later model consists of one predictive x-score component; component t [1] and three orthogonal x-score components to [1–3]. t [1] explains 4.8% of the predictive variation in x, to[1] explains 45.7% of the orthogonal variation in x, R2X (cum) = 0.506, R2Y (cum) = 1, R2 (cum) = 0.829, Goodness of prediction Q2 (cum) = 0.657.
Data corresponding to Fig. 1 regarding group assignment plus AUROCC for classification.
| Group | Samples (n) | Distribution of samples | % of correctly classified samples | AUROCC |
| |||
|---|---|---|---|---|---|---|---|---|
|
| 1–2.5 | >2.5–5 | >5–7.5 | >7.5 | ||||
| 1–2.5 | 18 | 0* | 17 | 1 | 0 | 0.00% | 0.75 | 2.5E-06 |
| >2.5–5 | 46 | 0 | 43* | 3 | 0 | 93.48% | 0.89 | |
| >5–7.5 | 41 | 0 | 1 | 40* | 0 | 97.56% | 0.9 | |
| >7.5 | 12 | 0 | 1 | 11 | 0* | 0.00% | 0.81 | |
|
| 1–5 | >5 | ||||||
| 1–5 | 64 | 64* | 0 | 100% | 0.98 | 1.5E-20 | ||
| >5 | 53 | 2 | 53* | 96% | 0.98 | |||
*Number of samples that correctly assigned to the correct group, AUROCC = area under the ROC curve.
Comparison of anthropometric and clinical measurements between the low (L) (n = 64) and high (H) (n = 53) dose glucocorticoid exposed groups. All measurements were similar between the two groups except for glucocorticoid dose.
| Parameter | Glucocorticoid dose group | Mean ± SD | Q1 | Median | Q3 | FDR-adjusted p value |
|---|---|---|---|---|---|---|
|
| L | 36.5 ± 10.8 | 30.15 | 35 | 42.15 | 0.64 |
| H | 35.4 ± 11.7 | 25.6 | 34.85 | 42.25 | ||
|
| L | 75.7 ± 13.9 | 65.9 | 73 | 83.6 | 0.76 |
| H | 77.9 ± 17.4 | 64.4 | 74.6 | 89.63 | ||
|
| L | 1.56 ± 0.08 | 1.51 | 1.57 | 1.62 | 0.39 |
| H | 1.58 ± 0.08 | 1.52 | 1.58 | 1.64 | ||
|
| L | 30.9 ± 6.04 | 26.9 | 30 | 33.95 | 0.83 |
| H | 30.84 ± 6.5 | 26.05 | 29.35 | 34.9 | ||
|
| L | 118.7 ± 12.1 | 110.16 | 117.33 | 125.8 | 0.27 |
| H | 122.7 ± 12.6 | 112.6 | 123 | 131.6 | ||
|
| L | 73.53 ± 9.01 | 68 | 73.3 | 79.3 | 0.21 |
| H | 76.9 ± 8.8 | 72.6 | 77 | 81.08 | ||
|
| L | 3.68 ± 1.3 | 2.5 | 3.75 | 5 | 1.4E-19 |
| H | 7.52 ± 1.7 | 6.25 | 7.5 | 7.5 | ||
|
| L | 8.56 ± 19.1 | 1.475 | 3.35 | 5.85 | 0.42 |
| H | 11.18 ± 15.7 | 1.7 | 3.1 | 15 | ||
|
| L | 65.3 ± 98.8 | 3 | 11.5 | 92.45 | 0.81 |
| H | 82.42 ± 162 | 4.25 | 12.55 | 80.85 | ||
|
| L | 45/19 | ||||
| H | 35/18 |
Up-value based on Mann-Whitney U test (non-parametric), L = 1–5 mg daily prednisolone equivalent, H = >5–15 mg daily prednisolone equivalent, PredEqBNF = daily prednisolone equivalents of glucocorticoids therapies based on British National Formulary.
Putative biomarkers significantly different between the low (L) and high (H) glucocorticoid dose groups.
| Metabolites | AUROCC | L:H | VIPpred | VIPortho |
|---|---|---|---|---|
| Tridecanoic acid(C13:0) | 0.63 | 1:0.9 | 0.58 | 0.54 |
| Pentadecanoic acid(C15:0) | 0.64 | 1:1.3 | 0.98 | 0.78 |
| Palmitic acid*(C16:0) | 0.66 | 1:1.4 | 1.06 | 1.07 |
| Eicosanoic acid (C20:0) | 0.65 | 1:1.4 | 1.03 | 0.92 |
| Palmitoleic acid(16:1) | 0.77 | 1:0.7 | 1.55 | 0.4 |
| Hydroxyeicosatrienoic acid(20:3) | 0.65 | 1:1.3 | 1.06 | 0.75 |
| Docosahexaenoic acid(22:6) | 0.65 | 1:1.2 | 0.87 | 0.62 |
| Prostaglandin B1 (C20:2) | 0.64 | 1:1.3 | 1.02 | 0.8 |
| Inosine* | 0.63 | 1:0.9 | 0.69 | 0.56 |
| Uridine* | 0.75 | 1:0.7 | 1.21 | 0.64 |
| Hypoxanthine* | 0.73 | 1:2.4 | 2.11 | 1.02 |
| Methionine* | 0.73 | 1:1.2 | 0.87 | 0.4 |
| 5-L-Glutamyl-taurine | 0.65 | 1:1.6 | 1.14 | 0.85 |
| Tryptophan* | 0.67 | 1:1.7 | 1.59 | 0.97 |
| Dehydroquinate | 0.67 | 1:1.3 | 1.02 | 0.82 |
| 3(4-Hydroxyphenyl)pyruvate* | 0.75 | 1:0.5 | 1.8 | 0.6 |
| Alpha-N-Phenylacetyl-L-glutamine | 0.61 | 1:0.9 | 0.55 | 0.43 |
| 4-Hydroxy-2-oxopentanoate | 0.65 | 1:3.5 | 2.34 | 1.6 |
| Asparagine* | 0.72 | 1:2.6 | 2.29 | 1.14 |
| Threonine* | 0.62 | 1:0.7 | 1.14 | 0.56 |
| Keto-glutaramic acid | 0.64 | 1:0.8 | 0.8 | 0.65 |
| N-Methylnicotinamide | 0.69 | 1:2.2 | 1.85 | 0.85 |
| Octanoylcarnitine | 0.66 | 1:1.4 | 1.16 | 0.83 |
| Chenodeoxyglycocholic acid | 0.82 | 1:4.8 | 6.73 | 1.46 |
*Retention time matches standard, AUROCC = area under the ROC curve, VIPpred = predictive value of variable importance in the projection, VIPortho = orthogonal value of variable importance in the projection. VIP values represent the contribution of the metabolite in the variability between the two groups compared to the other metabolites.
Figure 2Bars plot shows 24 metabolites (Table 3). Each bar represents a metabolite on y-axis its AUROCC value on the x-axis. Each metabolite bar comprises of two segments; VIPpred (predictive value of variable importance in the projection) (blue) and VIPortho (orthogonal value of variable importance in the projection) (red), their values presented as percentages. A metabolite was included in the final model if it had VIPpred ≥2*VIPortho. Only seven metabolites passed the filter.
Figure 3(A) OPLS-DA score plot was comprised 7 putative biomarkers (Table 4) quantified in 117 patients. Green observations (64 samples) represent patients receiving a GC dose of 1–5 prednisolone equivalent and the blue observations (53 samples) represent patients receiving GC dose >5–15 mg prednisolone equivalent. The model consists of one predictive x-score components; component t[1] and one orthogonal x-score component to[1]. t[1] explains 33.7% of the predictive variation in x, to[1] explains 23% of the orthogonal variation in x, R2X (cum) = 0.57, R2Y (cum) = 1, R2 (cum) = 0.535, Goodness of prediction Q2 (cum) = 0.497. Plot (B) showing area under the ROC curve (AUC) of the two groups, x-axis showing (FPR) false positive rate (1-specificity), y-axis showing true positive rate (sensitivity). AUC for 1) 1–5 = 0.92 and 2) >5–15 = 0.92.
List of significant biomarkers used to build the OPLS-DA model in Fig. 2.
| Putative biomarker | FDR-adjusted p value | L:H | VIP pred | VIP orth | r | 99% CI |
|---|---|---|---|---|---|---|
| Asparagine* | 4.5E-05 | 1:2.6 | 2.29 | 1.14 | 0.52 | (0.08, 0.34) |
| Tryptophan* | NA | 1:1.6 | 1.59 | 0.79 | 0.53 | (0.12, 0.29) |
| 4-Hydroxyphenyl pyruvate* | 6.6E-05 | 1:0.5 | 1.8 | 0.6 | −0.57 | (−0.37, −0.08) |
| Palmitoleic acid | NA | 1:0.7 | 1.55 | 0.4 | −0.66 | (−0.42, −0.1) |
| Chenodeoxyglycocholate | NA | 1:4.8 | 6.73 | 1.46 | 0.76 | (0.16, 0.44) |
| N-Methylnicotinamide | NA | 1:2.2 | 1.85 | 0.85 | 0.46 | (0.02, 0.34) |
| Hypoxanthine* | 1.8E-05 | 1:2.4 | 2.11 | 1.02 | 0.51 | (0.05, 0.34) |
*Retention time matches standard. r = correlation coefficient of a metabolite to high dose of GC.
NA The metabolite is not normally distributed.