| Literature DB >> 29211731 |
Conall H Watson1, Jeremaia Coriakula2, Dung Tran Thi Ngoc3, Stefan Flasche1, Adam J Kucharski1, Colleen L Lau4, Nga Tran Vu Thieu3, Olivier le Polain de Waroux1, Kitione Rawalai5, Tan Trinh Van2, Mere Taufa6, Stephen Baker3,7,8, Eric J Nilles9, Mike Kama6, W John Edmunds1.
Abstract
Empirical data on contact patterns can inform dynamic models of infectious disease transmission. Such information has not been widely reported from Pacific islands, nor strongly multi-ethnic settings, and few attempts have been made to quantify contact patterns relevant for the spread of gastrointestinal infections. As part of enteric fever investigations, we conducted a cross-sectional survey of the general public in Fiji, finding that within the 9,650 mealtime contacts reported by 1,814 participants, there was strong like-with-like mixing by age and ethnicity, with higher contact rates amongst iTaukei than non-iTaukei Fijians. Extra-domiciliary lunchtime contacts follow these mixing patterns, indicating the overall data do not simply reflect household structures. Inter-ethnic mixing was most common amongst school-age children. Serological responses indicative of recent Salmonella Typhi infection were found to be associated, after adjusting for age, with increased contact rates between meal-sharing iTaukei, with no association observed for other contact groups. Animal ownership and travel within the geographical division were common. These are novel data that identify ethnicity as an important social mixing variable, and use retrospective mealtime contacts as a socially acceptable metric of relevance to enteric, contact and respiratory diseases that can be collected in a single visit to participants. Application of these data to other island settings will enable communicable disease models to incorporate locally relevant mixing patterns in parameterisation.Entities:
Mesh:
Year: 2017 PMID: 29211731 PMCID: PMC5718486 DOI: 10.1371/journal.pone.0186911
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Participant demographics.
| All participants | iTaukei | Non-iTaukei | ||
|---|---|---|---|---|
| 1,814 | 1,409 (78) | 405 (22) | ||
| Sex (%) | Female | 966 (53.3) | 744 (53.3) | 222 (54.8) |
| Age (%) | 1 to 4 | 87 (4.8) | 74 (5.3) | 13 (3.2) |
| 5–14 | 299 (16.5) | 246 (17.5) | 53 (13.1) | |
| 15–34 | 654 (36.1) | 523 (37.1) | 131 (32.3) | |
| 35–54 | 473 (26.1) | 347 (24.6) | 126 (31.1) | |
| 55+ | 301 (16.6) | 219 (15.5) | 82 (20.2) | |
| Setting (%) | Urban | 505 (27.8) | 386 (27.4) | 119 (29.4) |
| Peri-urban | 289 (15.9) | 175 (12.4) | 114 (28.1) | |
| Rural | 1,020 (56.2) | 848 (60.2) | 172 (42.5) | |
Fig 1Distribution of daily contacts reported by A) all participants, B) iTaukei participants, C) non-iTaukei participants and D) participants stratified by age and ethnicity. Fig 1 A to C panels truncated at 50 contacts and D panels at 25 contacts for clarity as there were few reports of contact numbers in higher bands; densities are for the full range of reported value.
Unweighted mean number of daily contacts by age and ethnicity and 95% bootstrap confidence interval.
| Contacts | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| iTaukei | Non-iTaukei | |||||||||||
| Age | 0 to 4 | 5 to 14 | 15 to 34 | 35 to 54 | 55+ | 0 to 4 | 5 to 14 | 15 to 34 | 35 to 54 | 55+ | ||
| 0 | 0.07 (0 to 0.23) | 0 | 0.29 (0 to 0.73) | 0.2 (0 to 0.62) | 0.13 (0 to 0.5) | 0.29 (0 to 0.67) | 0.77 (0.26 to 1.3) | 0.54 (0.2 to 1) | 0.45 (0.09 to 0.93) | |||
| 0.09 (0.02 to 0.2) | 0.61 (0.25 to 1.14) | 0.18 (0.06 to 0.34) | 0.31 (0.06 to 0.8) | 0.02 (0 to 0.07) | 0.17 (0.07 to 0.27) | 1.56 (1.09 to 2.15) | 0.75 (0.42 to 1.31) | 0.93 (0.68 to 1.19) | 0.33 (0.18 to 0.53) | |||
| 0.16 (0.06 to 0.31) | 0.13 (0.04 to 0.25) | 0.28 (0.16 to 0.43) | 0.1 (0.02 to 0.23) | 0.14 (0.05 to 0.28) | 0.36 (0.25 to 0.51) | 0.48 (0.32 to 0.67) | 1.18 (0.91 to 1.5) | 1.02 (0.8 to 1.27) | 0.41 (0.24 to 0.63) | |||
| 0.04 (0 to 0.09) | 0.08 (0.02 to 0.16) | 0.17 (0.07 to 0.3) | 0.11 (0.05 to 0.18) | 0.02 (0 to 0.06) | 0.35 (0.18 to 0.57) | 0.56 (0.4 to 0.77) | 1.07 (0.81 to 1.36) | 1.27 (0.9 to 1.76) | 0.57 (0.3 to 1.03) | |||
| 0.01 (0 to 0.04) | 0.03 (0 to 0.13) | 0.08 (0.01 to 0.17) | 0.07 (0.01 to 0.16) | 0.07 (0.01 to 0.15) | 0.1 (0.03 to 0.18) | 0.19 (0.07 to 0.35) | 0.82 (0.55 to 1.14) | 0.57 (0.39 to 0.76) | 0.59 (0.43 to 0.79) | |||
| 1.15 (0.84 to 1.49) | 1.05 (0.63 to 1.62) | 1.66 (1.32 to 2.09) | 0.85 (0.61 to 1.1) | 0.51 (0.33 to 0.72) | 0.01 (0 to 0.05) | 0 | 0 | 0.03 (0 to 0.1) | 0 | |||
| 0.63 (0.47 to 0.81) | 3.2 (2.67 to 3.98) | 1.25 (1.09 to 1.4) | 1.28 (1.16 to 1.4) | 0.33 (0.24 to 0.45) | 0.01 (0 to 0.02) | 0.03 (0 to 0.07) | 0 (0 to 0.02) | 0.01 (0 to 0.03) | 0 (0 to 0.01) | |||
| 0.75 (0.64 to 0.87) | 0.99 (0.86 to 1.13) | 2.31 (2.05 to 2.58) | 1.34 (1.14 to 1.56) | 0.67 (0.54 to 0.83) | 0 (0 to 0.01) | 0.01 (0 to 0.01) | 0.01 (0 to 0.02) | 0.01 (0 to 0.03) | 0 | |||
| 0.47 (0.37 to 0.58) | 1.19 (1.02 to 1.36) | 1.42 (1.18 to 1.69) | 1.54 (1.28 to 1.84) | 0.59 (0.45 to 0.75) | 0 | 0 (0 to 0.01) | 0.02 (0 to 0.04) | 0.01 (0 to 0.04) | 0.01 (0 to 0.02) | |||
| 0.48 (0.36 to 0.61) | 0.84 (0.67 to 1.04) | 1.08 (0.89 to 1.32) | 0.92 (0.71 to 1.19) | 0.91 (0.74 to 1.1) | 0 | 0 | 0.01 (0 to 0.02) | 0 (0 to 0.02) | 0.01 (0 to 0.02) | |||
Unweighted mean number of non-household lunch contact by age and ethnicity (bootstrap 95% confidence intervals).
| Contacts | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| iTaukei | Non-iTaukei | |||||||||||
| Age | 0 to 4 | 5 to 14 | 15 to 34 | 35 to 54 | 55+ | 0 to 4 | 5 to 14 | 15 to 34 | 35 to 54 | 55+ | ||
| NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | |||
| 0.08 (0 to 0.18) | 0.7 (0.19 to 1.34) | 0.19 (0.03 to 0.36) | 0.43 (0.05 to 1.14) | 0 | 0.14 (0.03 to 0.26) | 1.78 (1.21 to 2.45) | 0.78 (0.3 to 1.48) | 0.84 (0.54 to 1.12) | 0.38 (0.17 to 0.64) | |||
| 0.19 (0 to 0.67) | 0.22 (0 to 0.69) | 0.25 (0 to 0.67) | 0.22 (0 to 0.78) | 0.19 (0 to 0.67) | 0.56 (0.24 to 1) | 0.5 (0.09 to 1.06) | 2.38 (1.68 to 3.21) | 1.69 (1.08 to 2.46) | 0.72 (0.22 to 1.5) | |||
| 0 | 0 | 0 | 0.05 (0 to 0.15) | 0 | 1 (0.06 to 2.14) | 1 (0.33 to 1.83) | 1.95 (0.92 to 3.18) | 3.3 (1.28 to 6) | 2.1 (0.35 to 4.4) | |||
| 0 | 0 | 0 | 0 | 0 | 0 | 0.5 (0 to 2) | 0.75 (0 to 3) | 1.25 (0 to 4) | 0.25 (0 to 1) | |||
| 2 (0.33 to 4) | 2.67 (0 to 8.59) | 0.83 (0 to 1.67) | 1.33 (0.33 to 2.33) | 0.33 (0 to 0.8) | 0 | 0 | 0 | 0 | 0 | |||
| 0.65 (0.42 to 0.93) | 4.86 (3.72 to 6.51) | 1.3 (1.07 to 1.56) | 1.27 (1.08 to 1.45) | 0.38 (0.23 to 0.57) | 0.01 (0 to 0.03) | 0.04 (0 to 0.12) | 0 | 0.01 (0 to 0.03) | 0.01 (0 to 0.03) | |||
| 0.86 (0.54 to 1.24) | 1.28 (0.96 to 1.68) | 3.42 (2.79 to 4.11) | 2.15 (1.56 to 2.95) | 0.86 (0.45 to 1.48) | 0 | 0 | 0.03 (0 to 0.07) | 0.03 (0 to 0.06) | 0 | |||
| 0.54 (0.17 to 1) | 1.37 (0.82 to 2.08) | 2.44 (1.48 to 3.59) | 2.76 (1.77 to 3.94) | 0.93 (0.41 to 1.56) | 0 | 0 | 0.05 (0 to 0.17) | 0.05 (0 to 0.17) | 0 | |||
| 1 (0.48 to 1.62) | 1.39 (0.76 to 2.11) | 1.93 (1.17 to 2.9) | 1.79 (0.91 to 2.87) | 1.32 (0.75 to 2) | 0 | 0 | 0 | 0 | 0 | |||
Fig 2Age and ethnicity structured mixing matrices of reciprocity-weighted unique mealtime contacts per day.
Logistic regression analysis of association between anti-Vi IgG seropositivity (100 EU), iTaukei daily contact number and participant age in 1,189 iTaukei participants from areas of Fiji never vaccinated against typhoid.
| Variable | Odds ratio (95%CI) | AIC | |
|---|---|---|---|
| iTaukei contact (per) | 1.026 (1.007 to 1.044) | 0.006 | 1046.3 |
| Age (per year) | 1.023 (1.014 to1.030) | <0.0001 |
Fig 3Travel outside of the community in the past week.