Literature DB >> 29206460

Complex Dynamics of Water in Protein Confinement.

Daniel R Martin, James E Forsmo1, Dmitry V Matyushov.   

Abstract

This paper studies single-molecule and collective dynamics of water confined in protein powders by means of molecular dynamics simulations. The single-particle dynamics show a modest retardation compared to the bulk but become highly stretched in the powder, with the stretching exponent of ≃0.2. The collective dynamics of the total water dipole are affected by intermolecular correlations inside water and by cross-correlations between the water and the protein. The dielectric spectrum of water in the powder has two nearly equal-amplitude peaks: a Debye peak with ≃16 ps relaxation time and a highly stretched peak with the relaxation time of ≃13 ns and a stretching exponent of ≃0.12. The slower relaxation component is not seen in the single-molecule correlation functions and can be assigned to elastic protein motions displacing water in the powder. The loss spectrum of the intermediate scattering function reported by neutron-scattering experiments is also highly stretched, with the high-frequency wing scaling according to a power law. Translational dynamics can become much slower in the powder than in the bulk but are overshadowed by the rotational loss in the overall loss spectrum of neutron scattering.

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Year:  2017        PMID: 29206460     DOI: 10.1021/acs.jpcb.7b10448

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  2 in total

1.  Dynamics of hydration water in gelatin and hyaluronic acid hydrogels.

Authors:  Sotiria Kripotou; Konstantinos Zafeiris; Maria Culebras-Martínez; Gloria Gallego Ferrer; Apostolos Kyritsis
Journal:  Eur Phys J E Soft Matter       Date:  2019-08-27       Impact factor: 1.890

2.  Active-Site Environmental Factors Customize the Photophysics of Photoenzymatic Old Yellow Enzymes.

Authors:  Bryan Kudisch; Daniel G Oblinsky; Michael J Black; Anna Zieleniewska; Megan A Emmanuel; Garry Rumbles; Todd K Hyster; Gregory D Scholes
Journal:  J Phys Chem B       Date:  2020-11-24       Impact factor: 2.991

  2 in total

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