Literature DB >> 29199313

The σ-hole revisited.

Peter Politzer1, Jane S Murray, Timothy Clark, Giuseppe Resnati.   

Abstract

A covalently-bonded atom typically has a region of lower electronic density, a "σ-hole," on the side of the atom opposite to the bond, along its extension. There is frequently a positive electrostatic potential associated with this region, through which the atom can interact attractively but noncovalently with negative sites. This positive potential reflects not only the lower electronic density of the σ-hole but also contributions from other portions of the molecule. These can significantly influence both the value and also the angular position of the positive potential, causing it to deviate from the extension of the covalent bond. We have surveyed these effects, and their consequences for the directionalities of subsequent noncovalent intermolecular interactions, for atoms of Groups IV-VII. The overall trends are that larger deviations of the positive potential result in less linear intermolecular interactions, while smaller deviations lead to more linear interactions. We find that the deviations of the positive potentials and the nonlinearities of the noncovalent interactions tend to be greatest for atoms of Groups V and VI. We also present arguments supporting the use of the 0.001 a.u. contour of the electronic density as the molecular surface on which to compute the electrostatic potential.

Entities:  

Year:  2017        PMID: 29199313     DOI: 10.1039/c7cp06793c

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  37 in total

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3.  Effect of external electric field on C-X ··· π halogen bonds.

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4.  Anesthetic activity and the electrostatic potential (revisited).

Authors:  Zenaida Peralta-Inga Shields; Paul G Seybold; Jane S Murray
Journal:  J Mol Model       Date:  2017-12-19       Impact factor: 1.810

5.  Pnictogen, chalcogen, and halogen bonds in catalytic systems: theoretical study and detailed comparison.

Authors:  Ling Lu; Yunxiang Lu; Zhengdan Zhu; Honglai Liu
Journal:  J Mol Model       Date:  2019-12-20       Impact factor: 1.810

6.  Quantifying bond strengths via a Coulombic force model: application to the impact sensitivity of nitrobenzene, nitrogen-rich nitroazole, and non-aromatic nitramine molecules.

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Journal:  J Mol Model       Date:  2021-02-04       Impact factor: 1.810

Review 7.  The Pnictogen Bond, Together with Other Non-Covalent Interactions, in the Rational Design of One-, Two- and Three-Dimensional Organic-Inorganic Hybrid Metal Halide Perovskite Semiconducting Materials, and Beyond.

Authors:  Arpita Varadwaj; Pradeep R Varadwaj; Helder M Marques; Koichi Yamashita
Journal:  Int J Mol Sci       Date:  2022-08-08       Impact factor: 6.208

8.  Beryllium bonding: insights from the σ- and π-hole analysis.

Authors:  M Esmaïl Alikhani
Journal:  J Mol Model       Date:  2020-04-04       Impact factor: 1.810

9.  Theoretical study on the noncovalent interactions involving triplet diphenylcarbene.

Authors:  Chunhong Zhao; Hui Lin; Aiting Shan; Shaofu Guo; Xiaoyan Li; Xueying Zhang
Journal:  J Mol Model       Date:  2021-07-09       Impact factor: 1.810

10.  Halogen Bonding Interactions of Polychlorinated Biphenyls and the Potential for Thyroid Disruption.

Authors:  Eric S Marsan; Craig A Bayse
Journal:  Chemistry       Date:  2020-02-25       Impact factor: 5.236

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