Literature DB >> 29199104

Reverse engineering the cancer metabolic network using flux analysis to understand drivers of human disease.

Mehmet G Badur1, Christian M Metallo2.   

Abstract

Metabolic dysfunction has reemerged as an essential hallmark of tumorigenesis, and metabolic phenotypes are increasingly being integrated into pre-clinical models of disease. The complexity of these metabolic networks requires systems-level interrogation, and metabolic flux analysis (MFA) with stable isotope tracing present a suitable conceptual framework for such systems. Here we review efforts to elucidate mechanisms through which metabolism influences tumor growth and survival, with an emphasis on applications using stable isotope tracing and MFA. Through these approaches researchers can now quantify pathway fluxes in various in vitro and in vivo contexts to provide mechanistic insights at molecular and physiological scales respectively. Knowledge and discoveries in cancer models are paving the way toward applications in other biological contexts and disease models. In turn, MFA approaches will increasingly help to uncover new therapeutic opportunities that enhance human health.
Copyright © 2017 International Metabolic Engineering Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Cancer; Metabolic flux analysis; Metabolism; Metabolomics; Mitochondria; Stable isotope tracing

Mesh:

Year:  2017        PMID: 29199104      PMCID: PMC5927620          DOI: 10.1016/j.ymben.2017.11.013

Source DB:  PubMed          Journal:  Metab Eng        ISSN: 1096-7176            Impact factor:   9.783


  10 in total

Review 1.  The Evasion Mechanisms of Cancer Immunity and Drug Intervention in the Tumor Microenvironment.

Authors:  Seong Keun Kim; Sun Wook Cho
Journal:  Front Pharmacol       Date:  2022-05-24       Impact factor: 5.988

2.  High-resolution 13C metabolic flux analysis.

Authors:  Christopher P Long; Maciek R Antoniewicz
Journal:  Nat Protoc       Date:  2019-08-30       Impact factor: 13.491

3.  Serine synthesis through PHGDH coordinates nucleotide levels by maintaining central carbon metabolism.

Authors:  Michael A Reid; Annamarie E Allen; Shiyu Liu; Maria V Liberti; Pei Liu; Xiaojing Liu; Ziwei Dai; Xia Gao; Qian Wang; Ying Liu; Luhua Lai; Jason W Locasale
Journal:  Nat Commun       Date:  2018-12-21       Impact factor: 14.919

Review 4.  Redox Homeostasis and Metabolism in Cancer: A Complex Mechanism and Potential Targeted Therapeutics.

Authors:  Alia Ghoneum; Ammar Yasser Abdulfattah; Bailey Olivia Warren; Junjun Shu; Neveen Said
Journal:  Int J Mol Sci       Date:  2020-04-28       Impact factor: 5.923

Review 5.  Analysing central metabolism in ultra-high resolution: At the crossroads of carbon and nitrogen.

Authors:  Safak Bayram; Susanne Fürst; Martin Forbes; Stefan Kempa
Journal:  Mol Metab       Date:  2019-12-19       Impact factor: 7.422

6.  Opposite Roles of Tumor Cell Proliferation and Immune Cell Infiltration in Postoperative Liver Metastasis of PDAC.

Authors:  Guangfu Wang; Shangnan Dai; Hao Gao; Yong Gao; Lingdi Yin; Kai Zhang; Xumin Huang; Zipeng Lu; Yi Miao
Journal:  Front Cell Dev Biol       Date:  2021-08-16

7.  Identification of 14 Differentially-Expressed Metabolism-Related Genes as Potential Targets of Gastric Cancer by Integrated Proteomics and Transcriptomics.

Authors:  Yongxin Zhang; Wenwei Liu; Wei Feng; Xiaofeng Wang; Tianxiang Lei; Zehong Chen; Wu Song
Journal:  Front Cell Dev Biol       Date:  2022-02-21

Review 8.  Metabolic flux analysis: a comprehensive review on sample preparation, analytical techniques, data analysis, computational modelling, and main application areas.

Authors:  Bruna de Falco; Francesco Giannino; Fabrizio Carteni; Stefano Mazzoleni; Dong-Hyun Kim
Journal:  RSC Adv       Date:  2022-09-07       Impact factor: 4.036

9.  Multi-Omics Perspective Reveals the Different Patterns of Tumor Immune Microenvironment Based on Programmed Death Ligand 1 (PD-L1) Expression and Predictor of Responses to Immune Checkpoint Blockade across Pan-Cancer.

Authors:  Kaitang Huang; Meiling Hu; Jiayun Chen; Jinfen Wei; Jingxin Qin; Shudai Lin; Hongli Du
Journal:  Int J Mol Sci       Date:  2021-05-13       Impact factor: 5.923

10.  Oncogenic R132 IDH1 Mutations Limit NADPH for De Novo Lipogenesis through (D)2-Hydroxyglutarate Production in Fibrosarcoma Sells.

Authors:  Mehmet G Badur; Thangaselvam Muthusamy; Seth J Parker; Shenghong Ma; Samuel K McBrayer; Thekla Cordes; Jose H Magana; Kun-Liang Guan; Christian M Metallo
Journal:  Cell Rep       Date:  2018-10-23       Impact factor: 9.423

  10 in total

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