Literature DB >> 29198584

Aptamers targeting cell surface proteins.

Masaki Takahashi1.   

Abstract

High affinity binders targeting specific cell surface proteins are vital for development of basic and applied biosciences. However, despite sustained efforts to generate such binders by chemicals and antibodies, there are still many cell surface proteins that lack high affinity binders. Nucleic acid aptamers have potential as binding molecules for cell surface proteins, because they form distinct structures that have high affinity and specificity for a wide range of targets. Aptamers are isolated from large combinatorial libraries using a unique iterative selection-amplification process known as systematic evolution of ligands by exponential enrichment (SELEX). Among advantages of this method, purified and complex heterogeneous targets, such as bacteria, viruses, and whole-living cells, can be used for selection of aptamers. Moreover, SELEX allows generation of cell-surface-specific aptamers without prior knowledge of expression profiles in target cells. Therefore, the technology has been widely used as a valid and feasible method to generate aptamers binding to cell surface proteins with intact structure. Herein, this review summarizes and updates iconic SELEX technologies that target membrane proteins.
Copyright © 2017 Elsevier B.V. and Société Française de Biochimie et Biologie Moléculaire (SFBBM). All rights reserved.

Keywords:  Aptamer; Cell surface protein; Nucleic acid; SELEX

Mesh:

Substances:

Year:  2017        PMID: 29198584     DOI: 10.1016/j.biochi.2017.11.019

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  7 in total

Review 1.  Nucleic Acid Aptamers Emerging as Modulators of G-Protein-Coupled Receptors: Challenge to Difficult Cell Surface Proteins.

Authors:  Masaki Takahashi
Journal:  Cells       Date:  2022-06-02       Impact factor: 7.666

2.  Dimerization of an aptamer generated from Ligand-guided selection (LIGS) yields a high affinity scaffold against B-cells.

Authors:  Sana Batool; Kimon V Argyropoulos; Roksana Azad; Precious Okeoma; Hasan Zumrut; Sanam Bhandari; Rigzin Dekhang; Prabodhika R Mallikaratchy
Journal:  Biochim Biophys Acta Gen Subj       Date:  2018-10-17       Impact factor: 3.770

3.  Nucleic acid ligands act as a PAM and agonist depending on the intrinsic ligand binding state of P2RY2.

Authors:  Masaki Takahashi; Ryo Amano; Michiru Ozawa; Anna Martinez; Kazumasa Akita; Yoshikazu Nakamura
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-04       Impact factor: 11.205

Review 4.  A Mini-Review: Clinical Development and Potential of Aptamers for Thrombotic Events Treatment and Monitoring.

Authors:  Alex T Ponce; Ka Lok Hong
Journal:  Biomedicines       Date:  2019-07-26

5.  Structural and Functional Aspects of G-Quadruplex Aptamers Which Bind a Broad Range of Influenza A Viruses.

Authors:  Anastasia A Novoseltseva; Nikita M Ivanov; Roman A Novikov; Yaroslav V Tkachev; Dmitry A Bunin; Alexandra S Gambaryan; Vadim N Tashlitsky; Alexander M Arutyunyan; Alexey M Kopylov; Elena G Zavyalova
Journal:  Biomolecules       Date:  2020-01-10

6.  Single-round isolation of diverse RNA aptamers from a random sequence pool.

Authors:  Masahiko Imashimizu; Masaki Takahashi; Ryo Amano; Yoshikazu Nakamura
Journal:  Biol Methods Protoc       Date:  2018-05-24

Review 7.  Recent Progress in the Identification of Aptamers Against Bacterial Origins and Their Diagnostic Applications.

Authors:  Nevina E Trunzo; Ka Lok Hong
Journal:  Int J Mol Sci       Date:  2020-07-18       Impact factor: 5.923

  7 in total

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