Literature DB >> 29193424

Oral cancer databases: A comprehensive review.

Gargi S Sarode1, Sachin C Sarode1, Nikunj Maniyar1, Rahul Anand1, Shankargouda Patil2.   

Abstract

Cancer database is a systematic collection and analysis of information on various human cancers at genomic and molecular level that can be utilized to understand various steps in carcinogenesis and for therapeutic advancement in cancer field. Oral cancer is one of the leading causes of morbidity and mortality all over the world. The current research efforts in this field are aimed at cancer etiology and therapy. Advanced genomic technologies including microarrays, proteomics, transcrpitomics, and gene sequencing development have culminated in generation of extensive data and subjection of several genes and microRNAs that are distinctively expressed and this information is stored in the form of various databases. Extensive data from various resources have brought the need for collaboration and data sharing to make effective use of this new knowledge. The current review provides comprehensive information of various publicly accessible databases that contain information pertinent to oral squamous cell carcinoma (OSCC) and databases designed exclusively for OSCC. The databases discussed in this paper are Protein-Coding Gene Databases and microRNA Databases. This paper also describes gene overlap in various databases, which will help researchers to reduce redundancy and focus on only those genes, which are common to more than one databases. We hope such introduction will promote awareness and facilitate the usage of these resources in the cancer research community, and researchers can explore the molecular mechanisms involved in the development of cancer, which can help in subsequent crafting of therapeutic strategies.
© 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  database; miRNA; oral cancer; oral cancer-specific database

Mesh:

Substances:

Year:  2017        PMID: 29193424     DOI: 10.1111/jop.12667

Source DB:  PubMed          Journal:  J Oral Pathol Med        ISSN: 0904-2512            Impact factor:   4.253


  10 in total

1.  Identification of key miRNAs and targeted genes involved in the progression of oral squamous cell carcinoma.

Authors:  Yuxi Gu; Shouyi Tang; Zhen Wang; Luyao Cai; Yingqiang Shen; Yu Zhou
Journal:  J Dent Sci       Date:  2021-09-06       Impact factor: 3.719

2.  miR-105 Promotes the Progression and Predicts the Prognosis for Oral Squamous Cell Carcinoma (OSCC).

Authors:  Hong-Yu Zhang; Jian-Hui Ma
Journal:  Cancer Manag Res       Date:  2020-11-10       Impact factor: 3.989

3.  MicroRNA-based risk scoring system to identify early-stage oral squamous cell carcinoma patients at high-risk for cancer-specific mortality.

Authors:  Angela J Yoon; Shuang Wang; David I Kutler; Richard D Carvajal; Elizabeth Philipone; Tian Wang; Scott M Peters; Dominic LaRoche; Brenda Y Hernandez; Bradley D McDowell; Claire R Stewart; Fatemeh Momen-Heravi; Regina M Santella
Journal:  Head Neck       Date:  2020-01-25       Impact factor: 3.147

4.  Knockdown of KPNA2 inhibits autophagy in oral squamous cell carcinoma cell lines by blocking p53 nuclear translocation.

Authors:  Feng Lin; Li Gao; Zhenyu Su; Xiaofang Cao; Yuanbo Zhan; Ying Li; Bin Zhang
Journal:  Oncol Rep       Date:  2018-05-17       Impact factor: 3.906

5.  Identification of Prognosis Associated microRNAs in HNSCC Subtypes Based on TCGA Dataset.

Authors:  Cintia M Chamorro Petronacci; Abel García García; Elena Padín Iruegas; Berta Rivas Mundiña; Alejandro I Lorenzo Pouso; Mario Pérez Sayáns
Journal:  Medicina (Kaunas)       Date:  2020-10-13       Impact factor: 2.430

6.  MicroRNA-Based Cancer Mortality Risk Scoring System and hTERT Expression in Early-Stage Oral Squamous Cell Carcinoma.

Authors:  Angela J Yoon; Regina M Santella; Shuang Wang; David I Kutler; Richard D Carvajal; Elizabeth Philipone; Tian Wang; Scott M Peters; Claire R Stewart; Fatemeh Momen-Heravi; Scott Troob; Matt Levin; Zohreh AkhavanAghdam; Austin J Shackelford; Carleigh R Canterbury; Masataka Shimonosono; Brenda Y Hernandez; Bradley D McDowell; Hiroshi Nakagawa
Journal:  J Oncol       Date:  2021-01-15       Impact factor: 4.375

7.  Long non‑coding RNA AFAP1‑AS1 facilitates the growth and invasiveness of oral squamous cell carcinoma by regulating the miR‑145/HOXA1 axis.

Authors:  Minghe Li; Dongsheng Yu; Zhihong Li; Cong Zhao; Chang Su; Jun Ning
Journal:  Oncol Rep       Date:  2020-12-24       Impact factor: 3.906

8.  The Cancer Research Database (CRDB): Integrated Platform to Gain Statistical Insight Into the Correlation Between Cancer and COVID-19.

Authors:  Shahid Ullah; Tianshun Gao; Farhan Ullah; Wajeeha Rahman; Dimitrios A Karras; Anees Ullah; Gulzar Ahmad; Muhammad Ijaz
Journal:  JMIR Cancer       Date:  2022-06-10

9.  The Oral Tumor Cell Exosome miR-10b Stimulates Cell Invasion and Relocation via AKT Signaling.

Authors:  Xiang Li; Ting Yang; Chuanji Shu
Journal:  Contrast Media Mol Imaging       Date:  2022-08-16       Impact factor: 3.009

10.  Assessment of Potential Prognostic Value of Peroxiredoxin 1 in Oral Squamous Cell Carcinoma.

Authors:  Yajun Shen; Haoyue Xu; Lingyu Li; Yunping Lu; Min Zhang; Xin Huang; Xiaofei Tang
Journal:  Cancer Manag Res       Date:  2021-07-15       Impact factor: 3.989

  10 in total

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