| Literature DB >> 29191560 |
Dong Xu1, Alexandrea G Ham2, Rickey D Tivis3, Matthew L Caylor4, Aoxiang Tao4, Steve T Flynn2, Peter J Economen2, Hung K Dang2, Royal W Johnson2, Vaughn L Culbertson5.
Abstract
In 2009 the U.S. Food and Drug Administration (FDA) placed a black box warning on metoclopramide (MCP) due to the increased risks and prevalence of tardive dyskinesia (TD). In this study, we developed a multi-step biomedical informatics screening (MSBIS) approach leveraging publicly available bioactivity and drug safety data to identify concomitant drugs that mitigate the risks of MCP-induced TD. MSBIS includes (1) TargetSearch (http://dxulab.org/software) bioinformatics scoring for drug anticholinergic activity using CHEMBL bioactivity data; (2) unadjusted odds ratio (UOR) scoring for indications of TD-mitigating effects using the FDA Adverse Event Reporting System (FAERS); (3) adjusted odds ratio (AOR) re-scoring by removing the effect of cofounding factors (age, gender, reporting year); (4) logistic regression (LR) coefficient scoring for confirming the best TD-mitigating drug candidates. Drugs with increasing TD protective potential and statistical significance were obtained at each screening step. Fentanyl is identified as the most promising drug against MCP-induced TD (coefficient: -2.68; p-value<0.01). The discovery is supported by clinical reports that patients fully recovered from MCP-induced TD after fentanyl-induced general anesthesia. Loperamide is identified as a potent mitigating drug against a broader range of drug-induced movement disorders through pharmacokinetic modifications. Using drug-induced TD as an example, we demonstrated that MSBIS is an efficient in silico tool for unknown drug-drug interaction detection, drug repurposing, and combination therapy design.Entities:
Keywords: Combination therapy; Drug repurposing; Drug safety; Drug-drug interactions; Metoclopramide; Tardive dyskinesia
Mesh:
Substances:
Year: 2017 PMID: 29191560 PMCID: PMC5832625 DOI: 10.1016/j.ebiom.2017.11.015
Source DB: PubMed Journal: EBioMedicine ISSN: 2352-3964 Impact factor: 8.143
Fig. 1The workflow of the MSBIS drug screening approach.
Fig. 2Schematic workflow of TargetSearch AC scoring using amitriptyline as an example.
UOR calculations table.
| Exposure | MCP | |
|---|---|---|
| TD reported (cases) | No TD reported (controls) | |
| + Drug B | a | b |
| − Drug B | c | d |
+ with, − without.
AC scores for the 28 medications selected from the bioinformatics screening.
| Medication | Drug class | Muscarinic Ach Receptors | Mean AC score | ||||
|---|---|---|---|---|---|---|---|
| M1 | M2 | M3 | M4 | M5 | |||
| Amitriptyline | Antidepressants | 1 | 1 | 1 | 1 | 1 | 1 |
| Imipramine | Antidepressants | 1 | 1 | 1 | 1 | 1 | 1 |
| Brompheniramine | Antihistamines | 0.75 | 0.43 | 0.43 | 0.75 | 0.75 | 0.62 |
| Carbinoxamine | Antihistamines | 0.65 | 0.65 | 0.65 | 0.65 | 0.65 | 0.65 |
| Chlorpheniramine | Antihistamines | 1 | 1 | 1 | 1 | 1 | 1 |
| Diphenhydramine | Antihistamines | 1 | 1 | 1 | 1 | 1 | 1 |
| Benztropine | Anti-Parkinson agents | 1 | 1 | 1 | 1 | 1 | 1 |
| Trihexyphenidyl | Anti-Parkinson agents | 1 | 1 | 1 | 1 | 1 | 1 |
| Chlorpromazine | Antipsychotics | 1 | 1 | 1 | 1 | 1 | 1 |
| Haloperidol | Antipsychotics | 1 | 0.39 | 0.39 | 1 | 1 | 0.76 |
| Perphenazine | Antipsychotics | 0.78 | 0.78 | 0.78 | 0.78 | 0.78 | 0.78 |
| Risperidone | Antipsychotics | 1 | 1 | 1 | 1 | 1 | 1 |
| Thioridazine | Antipsychotics | 1 | 1 | 1 | 1 | 1 | 1 |
| Trifluoperazine | Antipsychotics | 0.81 | 0.7 | 0.81 | 0.81 | 0.70 | 0.77 |
| Alprazolam | Benzodiazepines | 0 | 0 | 0 | 0.30 | 0.30 | 0.12 |
| Clorazepate | Benzodiazepines | 0.34 | 0.34 | 0.34 | 0.34 | 0.34 | 0.34 |
| Diazepam | Benzodiazepines | 0.40 | 0.40 | 0.40 | 0.40 | 0.40 | 0.40 |
| Atropine | Gastrointestinal agents | 1 | 1 | 1 | 1 | 1 | 1 |
| Dicyclomine | Gastrointestinal agents | 1 | 1 | 1 | 1 | 1 | 1 |
| Hyoscyamine | Gastrointestinal agents | 1 | 1 | 1 | 1 | 1 | 1 |
| Loperamide | Gastrointestinal agents | 0.49 | 0.49 | 0.49 | 0.49 | 0.49 | 0.49 |
| Promethazine | Gastrointestinal agents | 1 | 1 | 1 | 1 | 1 | 1 |
| Ranitidine | Gastrointestinal agents | 0.65 | 0.65 | 0 | 0 | 0 | 0.26 |
| Orphenadrine | Muscle relaxants | 1 | 1 | 1 | 1 | 1 | 1 |
| Fentanyl | Opioid Analgesic | 0.39 | 0.42 | 0.42 | 0.38 | 0.38 | 0.41 |
| Flavoxate | Anticholinergics | 0.34 | 1 | 1 | 0.33 | 0.34 | 0.60 |
| Oxybutynin | Anticholinergics | 1 | 1 | 1 | 0.52 | 0.46 | 0.80 |
| Tolterodine | Anticholinergics | 1 | 1 | 1 | 1 | 1 | 1 |
Summary of the calculated TD incident rates, UOR and AOR scores.
| Drug B | MCP | UOR | 95% CI | p-Value | AOR | |
|---|---|---|---|---|---|---|
| TD% (+ Drug B) | TD% (− Drug B) | |||||
| Alprazolam | 73/1251 (5.84%) | 17,797/41915 (42.46%) | 0.084 | (0.070–0.110) | 4.10E-92 | 4.34 |
| Amitriptyline | 40/1007 (3.97%) | 17,830/42159 (42.29%) | 0.056 | (0.040–0.080) | 8.65E-70 | 3.48 |
| Atropine | 4/241 (1.66%) | 17,866/42925 (41.62%) | 0.024 | (0.009–0.064) | 4.32E-13 | 0.46 |
| Diazepam | 33/972 (3.40%) | 17,837/42194 (42.27%) | 0.048 | (0.030–0.070) | 9.09E-65 | 1.64 |
| Diphenhydramine | 30/1058 (2.84%) | 17,840/42108 (42.37%) | 0.040 | (0.030–0.060) | 7.85E-67 | 0.76 |
| Fentanyl | 10/1685 (0.59%) | 17,860/41480 (43.06%) | 0.008 | (0.004–0.010) | 1.13E-51 | 0.07 |
| Loperamide | 5/1091 (0.46%) | 17,865/42075 (42.46%) | 0.006 | (0.003–0.020) | 5.73E-29 | 1.33E-05 |
| Ranitidine | 57/2081 (2.74%) | 17,830/42159 (42.29%) | 0.037 | (0.030–0.050) | 1.06E-131 | 1.30 |
Adjusted for reporting year, age, and gender. + with; − without.
Fig. 3The incidence rates of all reported adverse events potentially related to TD. (+ with; − without).
Fig. 4A summary of drug MCP-induced TD mitigating effects measured by LR coefficient scores. *Fentanyl was the one drug having both p-values < 0.01 with and without the drug exclusion list applied. Loperamide has a p-value < 0.01 without the drug exclusion list applied.