Literature DB >> 29191025

Progress and Future Direction of Chromosome-Centric Human Proteome Project.

Young-Ki Paik1, Christopher M Overall2, Eric W Deutsch3, Jennifer E Van Eyk4, Gilbert S Omenn3,5.   

Abstract

This special issue of JPR celebrates the fifth anniversary of the Chromosome-Centric Human Proteome Project (C-HPP). We present 27 manuscripts in four categories: (i) Metrics of Progress and Resources, (ii) Missing Protein Detection and Validation, (iii) Analytical Methods and Quality Assessment, and (iv) Protein Functions and Disease. We briefly introduce key messages from each paper, mostly from C-HPP teams and some from the Biology and Disease-driven HPP. From the first few months of the C-HPP NeXt-MP50 Missing Proteins Challenge, authors report 73 missing protein detections that meet the HPP guidelines using several novel approaches. Finally, we discuss future directions.

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Year:  2017        PMID: 29191025     DOI: 10.1021/acs.jproteome.7b00734

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  5 in total

Review 1.  Progress on Identifying and Characterizing the Human Proteome: 2018 Metrics from the HUPO Human Proteome Project.

Authors:  Gilbert S Omenn; Lydie Lane; Christopher M Overall; Fernando J Corrales; Jochen M Schwenk; Young-Ki Paik; Jennifer E Van Eyk; Siqi Liu; Michael Snyder; Mark S Baker; Eric W Deutsch
Journal:  J Proteome Res       Date:  2018-08-23       Impact factor: 4.466

Review 2.  Advances in the Chromosome-Centric Human Proteome Project: looking to the future.

Authors:  Young-Ki Paik; Gilbert S Omenn; William S Hancock; Lydie Lane; Christopher M Overall
Journal:  Expert Rev Proteomics       Date:  2017-11-10       Impact factor: 3.940

3.  Chromosome 17 Missing Proteins: Recent Progress and Future Directions as Part of the neXt-MP50 Challenge.

Authors:  Omer Siddiqui; Hongjiu Zhang; Yuanfang Guan; Gilbert S Omenn
Journal:  J Proteome Res       Date:  2018-10-23       Impact factor: 4.466

4.  Creation of Individual Scientific Concept-Centered Semantic Maps Based on Automated Text-Mining Analysis of PubMed.

Authors:  Ekaterina Ilgisonis; Andrey Lisitsa; Valerya Kudryavtseva; Elena Ponomarenko
Journal:  Adv Bioinformatics       Date:  2018-07-26

5.  ExteNDing Proteome Coverage with Legumain as a Highly Specific Digestion Protease.

Authors:  Wai Tuck Soh; Fatih Demir; Elfriede Dall; Andreas Perrar; Sven O Dahms; Maithreyan Kuppusamy; Hans Brandstetter; Pitter F Huesgen
Journal:  Anal Chem       Date:  2020-01-31       Impact factor: 6.986

  5 in total

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