| Literature DB >> 29190926 |
Zhangbiao Long1, Yali Du1, Hongmin Li1, Bing Han1.
Abstract
Thrombosis is one of the most common causes of mortality in Paroxysmal nocturnal hemoglobinuria (PNH), but the predisposing factors for thrombosis are yet to be defined. In this study, we outline the clinical characters and the susceptible genes which lead to thrombotic formation in 104 patients with PNH. The results displayed that the genotypes with minor alleles of rs495828 or rs2519093 in the ABO gene were associated with high risk to thrombus formation (OR 5.95, 95% CI 1.90-18.65 and OR 6.3, 95% CI 2.01-19.79, respectively). Further, the TT haplotype was associated with a significant increased risk of thrombosis (OR=3.25, 95%CI 1.42-7.39). Multivariate regression analysis showed larger PNH clone and genotypes with rs495828/rs2519093 minor allele as independent risk factors for thrombosis in PNH. Some patients who came back for follow-up were tested for the plasma levels of vWF and factor VIII. Patients carrying the rs495828/rs2519093 minor allele had a significant higher level of vWF and factor VIII compared with those carrying the major allele. Therefore, we found for the first time that the rs495828/rs2519093 polymorphism represent an independent prognostic factor in PNH patients for thrombus formation, probably by increasing the vWF and factor VIII.Entities:
Keywords: gene; paroxysmal nocturnal hemoglobinuria; polymorphism; thrombosis risk
Year: 2017 PMID: 29190926 PMCID: PMC5696192 DOI: 10.18632/oncotarget.21361
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Clinical characteristics of 104 patients with PNH
| Characteristic | Whole cohort | With thrombosis | Without thrombosis | |
|---|---|---|---|---|
| Cases, n (%) | 104 (100) | 17 (16.3) | 87 (83.7) | |
| Age (years) | 42.70±15.39 | 38.94±10.11 | 43.44±16.16 | 0.144 |
| Male gender, n (%) | 56 (54) | 9 (53) | 47 (45) | 0.935 |
| Bone marrow failure, n (%) | 43 (41) | 9 (53) | 34 (39) | 0.289 |
| PNH clone size (%) | 63.48±35.53 | 86.24±19.90 | 59.03±36.27 | |
| Reticulocytes (%) | 4.69±3.29 | 4.12±2.02 | 4.82±3.51 | 0.429 |
| Leukocytes (×109/L) | 4.01±1.91 | 4.31±2.28 | 3.95±1.84 | 0.49 |
| Hemoglobin (g/L) | 79.80±24.55 | 80.69±18.35 | 79.64±25.63 | 0.876 |
| Platelets (×109/L) | 109.51±85.55 | 93.94±98.41 | 112.44±83.24 | 0.43 |
| Lactate dehydrogenase (U/L) | 1211.40±883.60 | 1115.31±713.73 | 1231.36±917.73 | 0.635 |
| Total bilirubin (μmol/L) | 27.54±21.73 | 27.68±19.41 | 27.52±22.27 | 0.979 |
| Conjugated bilibubin (μmol/L) | 7.43±4.23 | 8.32±3.86 | 7.25±4.30 | 0.36 |
| Unconjugated bilibubin (μmol/L) | 20.11±19.34 | 19.36±17.49 | 20.26±19.79 | 0.865 |
| Hematuria, n (%) | 44 (42) | 7 (41) | 37 (43) | 0.918 |
| Protein C (%) | 111.04±21.01 | 110.63±27.01 | 111.12±19.87 | 0.932 |
| Protein S (%) | 105.96±19.91 | 101.56±25.70 | 106.80±18.69 | 0.338 |
| Fibrinogen (g/L) | 2.55±0.71 | 2.79±1.14 | 2.50±0.59 | 0.323 |
| D-dimer (mg/L) | 0.46±0.52 | 0.63±0.80 | 0.43±0.45 | 0.324 |
| Antithrombin (%) | 113.67±14.79 | 117.38±18.28 | 112.95±14.05 | 0.276 |
P value represented the significance of the data between patients with and without thrombosis.
Genotype and allele frequencies of 15 SNPs in PNH patients and their associations with thrombosis
| Gene | SNP | Genotype | With thrombosis | Without thrombosis | Dominant model | Recessive model | Allele | With thrombosis | Without thrombosis | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | OR (95% CI) | ||||||||||||
| ABO | rs495828 | TT | 1 | 1 | 5.95 (1.90-18.65) | 5.38(0.32-90.42) | 0.302 | T | 13 | 26 | 3.52 (1.57-7.90) | |||
| TG | 11 | 24 | G | 21 | 148 | |||||||||
| GG | 5 | 62 | ||||||||||||
| rs8176719 | CC | 6 | 15 | 0.087 | 2.24(0.47-10.63) | 0.516 | 2.62(0.84-8.19) | 0.105 | C | 21 | 82 | 1.81 (0.85-3.85) | 0.136 | |
| C -- | 9 | 52 | --. | 13 | 92 | |||||||||
| -- -- | 2 | 20 | ||||||||||||
| rs8176747 | GG | 0 | 12 | 0.242 | 0.60 (0.21-1.71) | 0.428 | 1.23(1.11-1.35) | 0.208 | G | 7 | 59 | 0.51 (0.21-1.23) | 0.160 | |
| GC | 7 | 35 | C | 27 | 115 | |||||||||
| CC | 10 | 40 | ||||||||||||
| rs2519093 | TT | 0 | 1 | 6.3 (2.01-19.79) | 1.20(1.10-1.31) | 1 | T | 12 | 25 | 3.25 (1.43-7.39) | ||||
| TC | 12 | 23 | C | 22 | 149 | |||||||||
| CC | 5 | 63 | ||||||||||||
| STXBP5 | rs1039084 | GG | 2 | 9 | 0.671 | 1.63 (0.56-4.60) | 0.434 | 1.16(0.23-5.89) | 1 | G | 12 | 50 | 1.35 (0.62-2.94) | 0.539 |
| GA | 8 | 32 | A | 22 | 124 | |||||||||
| AA | 7 | 46 | ||||||||||||
| vWF | rs1063856 | CC | 0 | 1 | 0.721 | 1.52 (0.29-8.06) | 0.647 | 1.20(1.10-1.31) | 1 | C | 2 | 8 | 1.30 (0.26-6.39) | 0.669 |
| CT | 2 | 6 | T | 32 | 166 | |||||||||
| TT | 15 | 80 | ||||||||||||
| GP6 | rs1613662 | GG | 0 | 0 | 0.187 | 3.73 (0.57-24.27) | 0.187 | -- | -- | G | 2 | 3 | 3.56 (0.57-22.19) | 0.189 |
| GA | 2 | 3 | A | 32 | 171 | |||||||||
| AA | 15 | 84 | ||||||||||||
| THBD | rs16984852 | AA | 0 | 0 | 1 | 0.69 (0.03-13.97) | 1 | -- | -- | A | 0 | 3 | 0.71 (0.04-14.07) | 1 |
| AC | 0 | 3 | C | 34 | 171 | |||||||||
| CC | 17 | 84 | ||||||||||||
| F11 | rs2036914 | TT | 0 | 7 | 0.364 | 0.54 (0.17-1.66) | 0.420 | 1.21(1.11-1.33) | 0.596 | T | 5 | 45 | 0.49 (0.18-1.36) | 0.193 |
| TC | 5 | 31 | C | 29 | 129 | |||||||||
| CC | 12 | 49 | ||||||||||||
| FGG | rs2066865 | GG | 2 | 24 | 0.362 | 0.91 (0.29-2.87) | 1 | 0.35(0.07-1.65) | 0.228 | G | 14 | 87 | 0.70 (0.33-1.48) | 0.357 |
| GA | 10 | 39 | A | 20 | 87 | |||||||||
| AA | 5 | 24 | ||||||||||||
| SLC44A2 | rs2288904 | AA | 1 | 10 | 0.278 | 1.95 (0.63-6.01) | 0.291 | 0.48(0.06-4.03) | 0.687 | A | 13 | 58 | 1.24 (0.58-2.65) | 0.693 |
| AG | 11 | 38 | G | 21 | 116 | |||||||||
| GG | 5 | 39 | ||||||||||||
| KNG1 | rs710446 | CC | 1 | 7 | 0.950 | 0.90 (0.31-2.59) | 1 | 0.71(0.08-6.21) | 1 | C | 8 | 45 | 0.88 (0.37-2.09) | 1 |
| CT | 6 | 31 | T | 26 | 129 | |||||||||
| TT | 10 | 49 | ||||||||||||
| TSPAN15 | rs78707713 | CC | 0 | 0 | 0.163 | 15.91 (0.62-408) | 0.163 | -- | -- | C | 1 | 0 | 15.63 (0.62-392.2) | 0.164 |
| CT | 1 | 0 | T | 33 | 174 | |||||||||
| TT | 16 | 87 | ||||||||||||
| PROCR | rs867186 | GG | 0 | 0 | 0.208 | 2.45 (0.56-10.62) | 0.208 | -- | -- | G | 3 | 7 | 2.31 (0.57-9.42) | 0.212 |
| GA | 3 | 7 | A | 31 | 167 | |||||||||
| AA | 14 | 80 | ||||||||||||
| VKORC1 | rs9923231 | CC | 0 | 0 | 0.737 | 1.37 (0.39-4.74) | 0.737 | -- | -- | C | 4 | 16 | 1.32 (0.41-4.21) | 0.750 |
| CT | 4 | 16 | T | 30 | 158 | |||||||||
| TT | 13 | 71 | ||||||||||||
OR: odds ratio; CI: confidence interval
Figure 1Cumulative incidence of thrombosis in PNH patients with different ABO genotypes
(A) whole cohort (B) thrombosis in different rs495828 genotypes, blue line represent PNH patients with genotype GT and genotype TT, green line represent PNH patients with genotype GG (C) thrombosis in different rs2519093 genotypes, blue line represent PNH patients with genotype TT and genotype TC, green line represent PNH patients with genotype CC.
Figure 2Linkage disequilibrium plots of ABO polymorphisms
(A) Red squares indicate statistically significant associations between two SNPs which measured by D’; darker shades of red indicate higher D’. (B) Blue squares indicate statistically significant associations between two SNPs which measured by r2 value; darker shades of blue indicate higher r2 value.
Haplotypes for the two SNPs in ABO gene and their associations with thrombosis risk in PNH patients
| rs495828 | rs2519093 | Case (N=34), n (%) | Control (N=174), n (%) | OR (95%) | |
|---|---|---|---|---|---|
| G | C | 21 (62) | 148 (85) | 0.28 (0.13-0.64) | |
| T | C | 1 (3) | 1 (1) | 5.24 (0.53-51.94) | 0.119 |
| T | T | 12 (35) | 25 (14) | 3.25 (1.43-7.39)) |
OR: odds ratio; CI: confidence interval.
Univariate and multivariate regression analysis of risk factors associated with thrombosis in PNH
| Parameters | Univariate | Multivariate | ||
|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | |||
| ≥40 years/<40 year | 0.36 (0.12-1.12) | 0.077 | ||
| male/female | 0.96 (0.34-2.71) | 0.935 | ||
| with/without | 1.75 (0.62-4.99) | 0.292 | ||
| >50%/≤50% | ||||
| ≥1.5 ULN/<1.5 ULN/ | 2.09 (0.43-10.11) | 0.360 | ||
| GT+TT/GG | ||||
| TC+TT/CC | ||||
OR: odds ratio; CI: confidence interval, # analyzed PNH clone size and rs495828; * analyzed PNH clone size and rs2519093.
Figure 3Plasma levels of vWF: Ag and VIII: C
(A) vWF:Ag between PNH patients with different rs495828 genotypes. (B) vWF:Ag between PNH patients with different rs2519093 genotypes. (C) vWF:Ag level between PNH patients and normal controls. (D) VIII: C level between PNH patients with different rs495828 genotypes. (E) VIII: C level between PNH patients with different rs2519093 genotypes. (F) VIII: C level between PNH patients and normal controls. Data are presented as mean ± Standard deviation.