Literature DB >> 29188086

In vivo study of optical speckle decorrelation time across depths in the mouse brain.

Muhammad Mohsin Qureshi1,2, Joshua Brake3,2, Hee-Jae Jeon1, Haowen Ruan3, Yan Liu3, Abdul Mohaimen Safi1, Tae Joong Eom4, Changhuei Yang3, Euiheon Chung1.   

Abstract

The strong optical scattering of biological tissue confounds our ability to focus light deeply into the brain beyond depths of a few hundred microns. This challenge can be potentially overcome by exploiting wavefront shaping techniques which allow light to be focused through or inside scattering media. However, these techniques require the scattering medium to be static, as changes in the arrangement of the scatterers between the wavefront recording and playback steps reduce the fidelity of the focus that is formed. Furthermore, as the thickness of the scattering medium increases, the influence of the dynamic nature becomes more severe due to the growing number of scattering events experienced by each photon. In this paper, by examining the scattering dynamics in the mouse brain in vivo via multispeckle diffusing wave spectroscopy (MSDWS) using a custom fiber probe that simulates a point-like source within the brain, we investigate the relationship between this decorrelation time and the depth of the point-like light source inside the living mouse brain at depths up to 3.2 mm.

Entities:  

Keywords:  (030.6140) Speckle; (170.3660) Light propagation in tissues; (170.7050) Turbid media

Year:  2017        PMID: 29188086      PMCID: PMC5695936          DOI: 10.1364/BOE.8.004855

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  28 in total

1.  Ultrasound-modulated optical tomography of biological tissue by use of contrast of laser speckles.

Authors:  Jun Li; Geng Ku; Lihong V Wang
Journal:  Appl Opt       Date:  2002-10-01       Impact factor: 1.980

2.  Diffusing wave spectroscopy.

Authors: 
Journal:  Phys Rev Lett       Date:  1988-03-21       Impact factor: 9.161

Review 3.  Going deeper than microscopy: the optical imaging frontier in biology.

Authors:  Vasilis Ntziachristos
Journal:  Nat Methods       Date:  2010-07-30       Impact factor: 28.547

4.  Measuring the transmission matrix in optics: an approach to the study and control of light propagation in disordered media.

Authors:  S M Popoff; G Lerosey; R Carminati; M Fink; A C Boccara; S Gigan
Journal:  Phys Rev Lett       Date:  2010-03-08       Impact factor: 9.161

5.  OPTICAL PHASE CONJUGATION FOR TURBIDITY SUPPRESSION IN BIOLOGICAL SAMPLES.

Authors:  Zahid Yaqoob; Demetri Psaltis; Michael S Feld; Changhuei Yang
Journal:  Nat Photonics       Date:  2008       Impact factor: 38.771

6.  A craniotomy surgery procedure for chronic brain imaging.

Authors:  Ricardo Mostany; Carlos Portera-Cailliau
Journal:  J Vis Exp       Date:  2008-02-15       Impact factor: 1.355

7.  Dynamic light scattering in turbid nonergodic media.

Authors:  Martin Medebach; Norbert Freiberger; Otto Glatter
Journal:  Rev Sci Instrum       Date:  2008-07       Impact factor: 1.523

8.  Robust flow measurement with multi-exposure speckle imaging.

Authors:  Ashwin B Parthasarathy; W J Tom; Ashwini Gopal; Xiaojing Zhang; Andrew K Dunn
Journal:  Opt Express       Date:  2008-02-04       Impact factor: 3.894

9.  Implementation of a digital optical phase conjugation system and its application to study the robustness of turbidity suppression by phase conjugation.

Authors:  Meng Cui; Changhuei Yang
Journal:  Opt Express       Date:  2010-02-15       Impact factor: 3.894

10.  Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.

Authors:  Lin Tian; S Andrew Hires; Tianyi Mao; Daniel Huber; M Eugenia Chiappe; Sreekanth H Chalasani; Leopoldo Petreanu; Jasper Akerboom; Sean A McKinney; Eric R Schreiter; Cornelia I Bargmann; Vivek Jayaraman; Karel Svoboda; Loren L Looger
Journal:  Nat Methods       Date:  2009-11-08       Impact factor: 28.547

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  13 in total

1.  Focusing light inside scattering media with magnetic-particle-guided wavefront shaping.

Authors:  Haowen Ruan; Tom Haber; Yan Liu; Joshua Brake; Jinho Kim; Jacob M Berlin; Changhuei Yang
Journal:  Optica       Date:  2017-11-20       Impact factor: 11.104

2.  Multi-speckle diffuse correlation spectroscopy to measure cerebral blood flow.

Authors:  K Murali; Hari M Varma
Journal:  Biomed Opt Express       Date:  2020-10-27       Impact factor: 3.732

3.  Erratum: In vivo study of optical speckle decorrelation time across depths in the mouse brain: erratum.

Authors:  Muhammad Mohsin Qureshi; Joshua Brake; Hee-Jae Jeon; Haowen Ruan; Yan Liu; Abdul Mohaimen Safi; Tae Joong Eom; Changhuei Yang; Euiheon Chung
Journal:  Biomed Opt Express       Date:  2017-10-16       Impact factor: 3.732

Review 4.  Cranial and Spinal Window Preparation for in vivo Optical Neuroimaging in Rodents and Related Experimental Techniques.

Authors:  Chanmi Yeon; Jeong Myo Im; Minsung Kim; Young Ro Kim; Euiheon Chung
Journal:  Exp Neurobiol       Date:  2022-06-30       Impact factor: 3.800

5.  Neurophotonic tools for microscopic measurements and manipulation: status report.

Authors:  Ahmed S Abdelfattah; Sapna Ahuja; Taner Akkin; Srinivasa Rao Allu; Joshua Brake; David A Boas; Erin M Buckley; Robert E Campbell; Anderson I Chen; Xiaojun Cheng; Tomáš Čižmár; Irene Costantini; Massimo De Vittorio; Anna Devor; Patrick R Doran; Mirna El Khatib; Valentina Emiliani; Natalie Fomin-Thunemann; Yeshaiahu Fainman; Tomas Fernandez-Alfonso; Christopher G L Ferri; Ariel Gilad; Xue Han; Andrew Harris; Elizabeth M C Hillman; Ute Hochgeschwender; Matthew G Holt; Na Ji; Kıvılcım Kılıç; Evelyn M R Lake; Lei Li; Tianqi Li; Philipp Mächler; Evan W Miller; Rickson C Mesquita; K M Naga Srinivas Nadella; U Valentin Nägerl; Yusuke Nasu; Axel Nimmerjahn; Petra Ondráčková; Francesco S Pavone; Citlali Perez Campos; Darcy S Peterka; Filippo Pisano; Ferruccio Pisanello; Francesca Puppo; Bernardo L Sabatini; Sanaz Sadegh; Sava Sakadzic; Shy Shoham; Sanaya N Shroff; R Angus Silver; Ruth R Sims; Spencer L Smith; Vivek J Srinivasan; Martin Thunemann; Lei Tian; Lin Tian; Thomas Troxler; Antoine Valera; Alipasha Vaziri; Sergei A Vinogradov; Flavia Vitale; Lihong V Wang; Hana Uhlířová; Chris Xu; Changhuei Yang; Mu-Han Yang; Gary Yellen; Ofer Yizhar; Yongxin Zhao
Journal:  Neurophotonics       Date:  2022-04-27       Impact factor: 4.212

6.  Deep tissue optical focusing and optogenetic modulation with time-reversed ultrasonically encoded light.

Authors:  Haowen Ruan; Joshua Brake; J Elliott Robinson; Yan Liu; Mooseok Jang; Cheng Xiao; Chunyi Zhou; Viviana Gradinaru; Changhuei Yang
Journal:  Sci Adv       Date:  2017-12-08       Impact factor: 14.136

7.  Time-reversed ultrasonically encoded optical focusing through highly scattering ex vivo human cataractous lenses.

Authors:  Yan Liu; Yuecheng Shen; Haowen Ruan; Frank L Brodie; Terence T W Wong; Changhuei Yang; Lihong V Wang
Journal:  J Biomed Opt       Date:  2018-01       Impact factor: 3.170

8.  Time-reversed magnetically controlled perturbation (TRMCP) optical focusing inside scattering media.

Authors:  Zhipeng Yu; Jiangtao Huangfu; Fangyuan Zhao; Meiyun Xia; Xi Wu; Xufeng Niu; Deyu Li; Puxiang Lai; Daifa Wang
Journal:  Sci Rep       Date:  2018-02-13       Impact factor: 4.379

9.  Optofluidic laser speckle image decorrelation analysis for the assessment of red blood cell storage.

Authors:  Hee-Jae Jeon; Muhammad Mohsin Qureshi; Seung Yeob Lee; Euiheon Chung
Journal:  PLoS One       Date:  2019-10-22       Impact factor: 3.240

10.  Laser speckle decorrelation time-based platelet function testing in microfluidic system.

Authors:  Hee-Jae Jeon; Muhammad Mohsin Qureshi; Seung Yeob Lee; Jaya Dilip Badadhe; Heejoo Cho; Euiheon Chung
Journal:  Sci Rep       Date:  2019-11-11       Impact factor: 4.379

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