Literature DB >> 29188082

Microarray analyzer based on wide field fluorescent microscopy with laser illumination and a device for speckle suppression.

Yuri Lysov1, Victor Barsky1, Dmitriy Urasov1, Roman Urasov1, Alecksey Cherepanov1, Dmitryi Mamaev1, Yegor Yegorov1, Alexander Chudinov1, Sergey Surzhikov1, Alla Rubina1, Olga Smoldovskaya1, Alexander Zasedatelev1.   

Abstract

A microarray analyzer was developed to obtain images and measure the fluorescence intensity of microarrays at three wavelengths from 380 nm to 850 nm. The analyzer contains lasers to excite fluorescence, barrier filters, optics to project images on an image detector, and a device for suppressing laser speckles on the microarray support. The speckle suppression device contains a fibre-optic bundle and a rotating mirror positioned in a way to change the distance between the bundle butt and mirror surface during each mirror revolution. The analyzer provides for measurements with accuracy within ± 5%. Obtaining images at several exposure times allowed a significant expansion in the range of measured fluorescence intensities. The analyzer is useful for high throughput analysis of the same type of microarrays.

Keywords:  (110.2970) Image detection systems; (140.2020) Diode lasers; (150.2945) Illumination design; (170.0110) Imaging systems; (170.3880) Medical and biological imaging; (180.2520) Fluorescence microscopy

Year:  2017        PMID: 29188082      PMCID: PMC5695932          DOI: 10.1364/BOE.8.004798

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  13 in total

1.  Laser speckle reduction by multimode optical fiber bundle with combined temporal, spatial, and angular diversity.

Authors:  Dalip Singh Mehta; Dinesh N Naik; Rakesh Kumar Singh; Mitsuo Takeda
Journal:  Appl Opt       Date:  2012-04-20       Impact factor: 1.980

2.  Ultrasensitive RNA profiling: counting single molecules on microarrays.

Authors:  Kalim U Mir
Journal:  Genome Res       Date:  2006-09-08       Impact factor: 9.043

3.  Kinetic effects on signal normalization in oligonucleotide microchips with labeled immobilized probes.

Authors:  S V Pan'kov; V R Chechetkin; O G Somova; O V Antonova; O V Moiseeva; D V Prokopenko; R A Yurasov; D A Gryadunov; A V Chudinov
Journal:  J Biomol Struct Dyn       Date:  2009-10

Review 4.  Basic concepts of microarrays and potential applications in clinical microbiology.

Authors:  Melissa B Miller; Yi-Wei Tang
Journal:  Clin Microbiol Rev       Date:  2009-10       Impact factor: 26.132

5.  UV fluorescence of tryptophan residues effectively measures protein binding to nucleic acid fragments immobilized in gel elements of microarrays.

Authors:  Olga A Zasedateleva; Vadim A Vasiliskov; Sergey A Surzhikov; Alexey Y Sazykin; Lidiya V Putlyaeva; Anton M Schwarz; Dmitry V Kuprash; Alla Y Rubina; Victor E Barsky; Alexander S Zasedatelev
Journal:  Biotechnol J       Date:  2014-07-09       Impact factor: 4.677

6.  Gel-based microarrays in clinical diagnostics in Russia.

Authors:  Dmitry Gryadunov; Ekaterina Dementieva; Vladimir Mikhailovich; Tatiana Nasedkina; Alla Rubina; Elena Savvateeva; Eugeny Fesenko; Alexander Chudinov; Danila Zimenkov; Alexander Kolchinsky; Alexander Zasedatelev
Journal:  Expert Rev Mol Diagn       Date:  2011-11       Impact factor: 5.225

7.  Analysis of Common Single Nucleotide Polymorphisms in Complex Regional Pain Syndrome: Genome Wide Association Study Approach and Pooled DNA Strategy.

Authors:  Piotr K Janicki; Guillermo M Alexander; Jill Eckert; Marek Postula; Robert J Schwartzman
Journal:  Pain Med       Date:  2016-06-10       Impact factor: 3.750

8.  A large field CCD system for quantitative imaging of microarrays.

Authors:  G Hamilton; N Brown; V Oseroff; B Huey; R Segraves; D Sudar; J Kumler; D Albertson; D Pinkel
Journal:  Nucleic Acids Res       Date:  2006-05-02       Impact factor: 16.971

9.  Development of a microarray-based method for allergen-specific IgE and IgG4 detection.

Authors:  Guzel Feyzkhanova; Sergei Voloshin; Olga Smoldovskaya; Alla Arefieva; Marina Filippova; Viktor Barsky; Ludmila Pavlushkina; Veronika Butvilovskaya; Alexei Tikhonov; Yuri Reznikov; Alla Rubina
Journal:  Clin Proteomics       Date:  2017-01-09       Impact factor: 3.988

10.  Microarray profiling of circular RNAs in human papillary thyroid carcinoma.

Authors:  Nianchun Peng; Lixin Shi; Qiao Zhang; Ying Hu; Nanpeng Wang; Hui Ye
Journal:  PLoS One       Date:  2017-03-13       Impact factor: 3.240

View more
  6 in total

1.  Patterns of sensitization to inhalant and food allergens among pediatric patients from the Moscow region (Russian Federation).

Authors:  Sergei Voloshin; Olga Smoldovskaya; Guzel Feyzkhanova; Alla Arefieva; Lyudmila Pavlushkina; Tatiana Filatova; Veronika Butvilovskaya; Marina Filippova; Yuri Lysov; Sergey Shcherbo; Alexander Makarov; Alla Rubina; Alexander Zasedatelev
Journal:  PLoS One       Date:  2018-03-22       Impact factor: 3.240

2.  Allergen-specific IgE and IgG4 patterns among patients with different allergic diseases.

Authors:  Olga Smoldovskaya; Guzel Feyzkhanova; Sergei Voloshin; Alla Arefieva; Antonina Chubarova; Ludmila Pavlushkina; Tatiana Filatova; Eugenia Antonova; Elena Timofeeva; Veronika Butvilovskaya; Yuri Lysov; Alexander Zasedatelev; Alla Rubina
Journal:  World Allergy Organ J       Date:  2018-12-03       Impact factor: 4.084

3.  The EIMB Hydrogel Microarray Technology: Thirty Years Later.

Authors:  D A Gryadunov; B L Shaskolskiy; T V Nasedkina; A Yu Rubina; A S Zasedatelev
Journal:  Acta Naturae       Date:  2018 Oct-Dec       Impact factor: 1.845

4.  Microarray-Based Detection of Antibodies against SARS-CoV-2 Proteins, Common Respiratory Viruses and Type I Interferons.

Authors:  Elena Savvateeva; Marina Filippova; Vladimir Valuev-Elliston; Nurana Nuralieva; Marina Yukina; Ekaterina Troshina; Vladimir Baklaushev; Alexander Ivanov; Dmitry Gryadunov
Journal:  Viruses       Date:  2021-12-20       Impact factor: 5.048

5.  Adaptation of Microarray Assay for Serum Amyloid a Analysis in Human Serum.

Authors:  O V Smoldovskaya; S A Voloshin; A A Novikov; E N Aleksandrova; G U Feyzkhanova; A Yu Rubina
Journal:  Mol Biol       Date:  2022-04-14       Impact factor: 1.540

6.  Multiplex Autoantibody Detection in Patients with Autoimmune Polyglandular Syndromes.

Authors:  Elena N Savvateeva; Marina Yu Yukina; Nurana F Nuralieva; Marina A Filippova; Dmitry A Gryadunov; Ekaterina A Troshina
Journal:  Int J Mol Sci       Date:  2021-05-23       Impact factor: 5.923

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.