| Literature DB >> 29186807 |
Monica Fedele1, Elvira Crescenzi1, Laura Cerchia1.
Abstract
PATZ1 is a zinc finger protein, belonging to the POZ domain Krüppel-like zinc finger (POK) family of architectural transcription factors, first discovered in 2000 by three independent groups. Since that time accumulating evidences have shown its involvement in a variety of biological processes (i.e., embryogenesis, stemness, apoptosis, senescence, proliferation, T-lymphocyte differentiation) and human diseases. Here we summarize these studies with a focus on the PATZ1 emerging and controversial role in cancer, where it acts as either a tumor suppressor or an oncogene. Finally, we give some insight on clinical perspectives using PATZ1 as a prognostic marker and therapeutic target.Entities:
Keywords: PATZ1; biomarker; cancer; chromatin regulator; stem cells
Mesh:
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Year: 2017 PMID: 29186807 PMCID: PMC5751127 DOI: 10.3390/ijms18122524
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1PATZ1 transcript variants and protein structure. Schematic representation of the 4 transcript variants of the PATZ1 gene. Variant 1 represents the longest transcript and encodes the longest isoform (long C isoform). Variant 2 lacks an alternate segment in the 3′ coding region, compared to variant 1. The resulting protein (long A isoform) maintains the same reading frame and is shorter when compared to the long C isoform. Variant 3 uses an alternate splice site in the 3′ coding region, compared to variant 1, that results in a frameshift. It encodes the long B isoform which has a shorter and distinct C-terminus compared to the long C isoform. Transcript variant 4 differs in the 3′ UTR and has multiple coding region differences (compared to variant 1), one of which results in a frameshift. This results in a shorter protein (short isoform) with a distinct C-terminus, compared to the long C isoform. The schematic protein structure of a representative PATZ1 isoform is shown at the bottom. POZ: POZ/BTB domain; AT: AT-hook domain; ZN: Zinc finger domain.
Figure 2PATZ1 expression in human tissues. mRNA levels of PATZ1 in a panel of human tissues, obtained through Cap Analysis of Gene Expression (CAGE) by the FANTOM5 project [22]. The data have been extracted from the Human Protein Atlas [23]. PATZ1 is expressed at variable levels in all tissues.
Figure 3Malignant tumors in PATZ1 knockout mice. Percentage of mice showing malignant tumors are showed in pie charts on the top. The specific tumor phenotype, and relative number of mice showing it, is reported in the table. The mice analyzed were wild-type (Patz1+/+) and carrying one (Patz1+/−) or two (Patz1−/−) knockout allele. NA = not applicable.