| Literature DB >> 29179499 |
Yong Zhu1, Shunan Li2, FangLin Niu3, Mengdan Yan3, Jing Li3, Haiyu Jia4, Xuejun Yang1.
Abstract
Lumbar disc disease (LDD) is a common musculoskeletal disorder, caused by degeneration of intervertebral discs of the lumbar spine and is one of the most common musculoskeletal disorders affliction in adult. There is growing evidence that LDD has strong genetic determinants. We analyze whether the IL4 and IL6 gene polymorphism is related to LDD in Chinese Han population. The participants were 498 with LDD and 463 without LDD. IL4 and IL6 gene polymorphism were determined by Sequenom MassARRAY. We found that SNPs rs1800796(OR = 1.29, 95% CI, 1.07 - 1.57, p = 0.009), rs1524107(OR = 1.28, 95% CI, 1.05 - 1.55, p = 0.013), rs2069840 (OR = 1.39, 95% CI, 1.03 - 1.89, p = 0.033) in IL6 gene were significantly associated with LDD risk at a 5% level. In addition, genetic models found IL4 gene (rs2243250) were associated with LDD. In this study, we analyzed and associated SNPs of IL4 and IL6 with LDD risk. In summary, four variations (rs1800796, rs1524107, rs2069840, rs2243250) of the selected candidate SNPs were associated with susceptibility to LDD in our study. The results of this study have the guiding significance in clinical work in the future in the treatment of lumbar disc herniation patients, not one-sided that the symptoms of low back pain only from mechanical oppression.Entities:
Keywords: Han Chinese; IL4; IL6; case-control; lumbar disc disease (LDD)
Year: 2017 PMID: 29179499 PMCID: PMC5687669 DOI: 10.18632/oncotarget.21650
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Characteristics of LDD patients and control participants
| Case | Control | P | |
|---|---|---|---|
| 498 | 463 | ||
| Gender | 0.413 | ||
| Male | 298 | 265 | |
| Female | 200 | 198 | |
| Age | 50.27±12.53 | 50.65±11.79 | 0.978 |
p ≤ 0.05 indicates statistical significance.
p was calculated by Pearson’s χ2 test.
Basic information on candidate SNPs and their association with LDD risk in this study
| SNP | Gene | Chr | Allele | MAF(case) | MAF(control) | HWE | OR | 95%CI | P |
|---|---|---|---|---|---|---|---|---|---|
| rs2243250 | IL4 | 5q31.1 | C/T | 0.211 | 0.245 | 0.131 | 0.82 | 0.67-1.02 | 0.073 |
| rs2227284 | IL4 | 5q31.1 | G/T | 0.16 | 0.172 | 0.100 | 0.92 | 0.72-1.17 | 0.477 |
| rs2243267 | IL4 | 5q31.1 | G/C | 0.212 | 0.240 | 0.253 | 0.85 | 0.69-1.06 | 0.144 |
| rs2243270 | IL4 | 5q31.1 | A/G | 0.212 | 0.240 | 0.253 | 0.85 | 0.69-1.06 | 0.144 |
| rs2243283 | IL4 | 5q31.1 | G/C | 0.161 | 0.185 | 0.120 | 0.84 | 0.66-1.07 | 0.156 |
| rs2243289 | IL4 | 5q31.1 | A/G | 0.211 | 0.234 | 0.244 | 0.87 | 0.70-1.08 | 0.216 |
| rs1800796 | IL6 | 7p15.3 | G/C | 0.344 | 0.288 | 0.309 | 1.29 | 1.07-1.57 | 0.009* |
| rs2069837 | IL6 | 7p15.3 | G/A | 0.203 | 0.189 | 0.097 | 1.09 | 0.87-1.37 | 0.452 |
| rs1524107 | IL6 | 7p15.3 | T/C | 0.35 | 0.297 | 0.025 | 1.28 | 1.05-1.55 | 0.013* |
| rs2069840 | IL6 | 7p15.3 | G/C | 0.112 | 0.083 | 0.116 | 1.39 | 1.03-1.89 | 0.033* |
MAF: minor allele frequency; OR: odds ratio; 95% CI: 95% confidence interval. * p < 0.05 indicates statistical significance.
HWE p ≤ 0.01 is excluded.
Association between IL4, IL6 genotypes and LDD risk under different genotypic models
| Model | Genotype | Control | Case | ORa | Pa-value | ORb | Pb-value | |
|---|---|---|---|---|---|---|---|---|
| rs2243250 | Codominant | T/T | 270 (58.3%) | 307 (61.6%) | 1 | 0.052 | 1 | 0.052 |
| C/T | 159 (34.3%) | 172 (34.5%) | 0.95 | 0.95 | ||||
| C/C | 34 (7.3%) | 19 (3.8%) | 0.49 | 0.49 | ||||
| Dominant | T/T | 270 (58.3%) | 307 (61.6%) | 1 | 0.29 | 1 | 0.28 | |
| C/T-C/C | 193 (41.7%) | 191 (38.4%) | 0.87 | 0.87 | ||||
| Recessive | T/T-C/T | 429 (92.7%) | 479 (96.2%) | 1 | 0.016 | 1 | 0.016 | |
| C/C | 34 (7.3%) | 19 (3.8%) | 0.50 | 0.50 | ||||
| Log-additive | --- | --- | --- | 0.83 (0.67-1.02) | 0.076 | 0.82 | 0.073 | |
| rs1800796 | Codominant | C/C | 239 (51.6%) | 210 (42.2%) | 1 | 0.015 | 1 | 0.016 |
| G/C | 181 (39.1%) | 232 (46.7%) | 1.46 | 1.45 | ||||
| G/G | 43 (9.3%) | 55 (11.1%) | 1.46 | 1.45 | ||||
| Dominant | C/C | 239 (51.6%) | 210 (42.2%) | 1 | 0.0036 | 1 | 0.004 | |
| G/C-G/G | 224 (48.4%) | 287 (57.8%) | 1.46 | 1.45 | ||||
| Recessive | C/C-G/C | 420 (90.7%) | 442 (88.9%) | 1 | 0.36 | 1 | 0.37 | |
| G/G | 43 (9.3%) | 55 (11.1%) | 1.22 | 1.21 (0.79-1.85) | ||||
| Log-additive | --- | --- | --- | 1.29 | 0.0088 | 1.29 (1.06-1.57) | 0.0097 | |
| rs1524107 | Codominant | T/T | 238 (51.6%) | 207 (41.6%) | 1 | 0.0055 | 1 | 0.0063 |
| C/T | 172 (37.3%) | 233 (46.8%) | 1.56 (1.19-2.04) | 1.55 | ||||
| C/C | 51 (11.1%) | 58 (11.7%) | 1.31 | 1.30 | ||||
| Dominant | T/T | 238 (51.6%) | 207 (41.6%) | 1 | 0.0018 | 1 | 0.0021 | |
| C/T-C/C | 223 (48.4%) | 291 (58.4%) | 1.50 | 1.49 | ||||
| Recessive | T/T-C/T | 410 (88.9%) | 440 (88.3%) | 1 | 0.78 | 1 | 0.78 | |
| C/C | 51 (11.1%) | 58 (11.7%) | 1.06 | 1.06 | ||||
| Log-additive | --- | --- | --- | 1.27 | 0.014 | 1.26 | 0.016 | |
| rs2069840 | Codominant | C/C | 391 (84.6%) | 386 (78.1%) | 1 | 0.0087 | 1 | 0.0095 |
| G/C | 65 (14.1%) | 105 (21.3%) | 1.64 | 1.63 | ||||
| G/G | 6 (1.3%) | 3 (0.6%) | 0.51 | 0.51 | ||||
| Dominant | C/C | 391 (84.6%) | 386 (78.1%) | 1 | 0.0098 | 1 | 0.011 | |
| G/C-G/G | 71 (15.4%) | 108 (21.9%) | 1.54 | 1.53 | ||||
| Recessive | C/C-G/C | 456 (98.7%) | 491 (99.4%) | 1 | 0.27 | 1 | 0.27 | |
| G/G | 6 (1.3%) | 3 (0.6%) | 0.46 | 0.46 | ||||
| Log-additive | --- | --- | --- | 1.39 | 0.032 | 1.39 | 0.034 |
OR: odds ratio; 95% CI: 95% confidence interval. * p < 0.05 indicates statistical significance.
a: calculated from two-sided chi-square tests or Fisher's exact tests for either genotype distribution.
: calculated by unconditional logistic regression adjusted for age and sex.
Figure 1Haplotype block map for the IL4, IL6 SNPs genotyped in this study
IL6 haplotype frequencies and their associations with LDD risk
| rs1800796 | rs2069837 | Freq | ORa (95% CI) | Pa-value | ORb(95% CI) | Pb-value | |
|---|---|---|---|---|---|---|---|
| 1 | C | A | 0.6787 | 1 | --- | 1 | --- |
| 2 | G | G | 0.192 | 1.16 (0.93 - 1.46) | 0.19 | 1.16 (0.93 - 1.46) | 0.190 |
| 3 | G | A | 0.1252 | 1.57 (1.18 - 2.09) | 0.0022 | 1.56 (1.17 - 2.08) | 0.003 |
OR: odds ratio; 95% CI: 95% confidence interval.
a: calculated from two-sided chi-square tests or Fisher’s exact tests for either genotype distribution.
: calculated by unconditional logistic regression adjusted for age and sex.
The association between SNPs and age, gender analysis of LDD patients
| SNP | Gene | Allele | ≤50 | >50 | Male | Female | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR | 95%CI | P | OR | 95%CI | P | OR | 95%CI | P | OR | 95%CI | P | |||
| rs2243250 | IL4 | C/T | 0.88 | 0.65-1.20 | 0.430 | 0.77 | 0.57-1.04 | 0.084 | 0.87 | 0.66-1.15 | 0.320 | 0.76 | 0.55-1.06 | 0.110 |
| rs2227284 | IL4 | G/T | 1.05 | 0.74-1.49 | 0.776 | 0.81 | 0.58-1.13 | 0.208 | 1.01 | 0.74-1.37 | 0.968 | 0.78 | 0.53-1.15 | 0.215 |
| rs2243267 | IL4 | G/C | 0.89 | 0.66-1.22 | 0.479 | 0.81 | 0.61-1.10 | 0.177 | 0.92 | 0.7-1.22 | 0.575 | 0.76 | 0.55-1.06 | 0.109 |
| rs2243270 | IL4 | A/G | 0.89 | 0.66-1.22 | 0.479 | 0.81 | 0.61-1.10 | 0.177 | 0.92 | 0.7-1.22 | 0.575 | 0.76 | 0.55-1.06 | 0.109 |
| rs2243283 | IL4 | G/C | 0.81 | 0.57-1.15 | 0.243 | 0.87 | 0.63-1.20 | 0.394 | 0.76 | 0.56-1.04 | 0.085 | 0.97 | 0.67-1.41 | 0.872 |
| rs2243289 | IL4 | A/G | 0.94 | 0.69-1.28 | 0.701 | 0.81 | 0.60-1.10 | 0.177 | 0.93 | 0.70-1.24 | 0.628 | 0.79 | 0.57-1.11 | 0.174 |
| rs1800796 | IL6 | G/C | 1.25 | 0.93-1.66 | 0.134 | 1.34 | 1.03-1.74 | 0.029 | 1.35 | 1.05-1.73 | 0.018 | 1.20 | 0.88-1.63 | 0.246 |
| rs2069837 | IL6 | G/A | 0.89 | 0.63-1.26 | 0.524 | 1.27 | 0.94-1.71 | 0.123 | 1.05 | 0.79-1.41 | 0.726 | 1.14 | 0.80-1.63 | 0.459 |
| rs1524107 | IL6 | T/C | 1.18 | 0.89-1.57 | 0.257 | 1.36 | 1.05-1.77 | 0.020 | 1.30 | 1.01-1.66 | 0.040 | 1.23 | 0.91-1.67 | 0.182 |
| rs2069840 | IL6 | G/C | 1.72 | 1.09-2.71 | 0.019 | 1.16 | 0.77-1.76 | 0.470 | 1.49 | 1.01-2.21 | 0.045 | 1.24 | 0.76-2.02 | 0.396 |
OR: odds ratio; 95% CI: 95% confidence interval. p < 0.05 indicates statistical significance.