Literature DB >> 29178794

Polarizable Density Embedding: A Solution to the Electron Spill-Out Problem in Multiscale Modeling.

Peter Reinholdt1, Jacob Kongsted1, Jógvan Magnus Haugaard Olsen1.   

Abstract

We analyze the performance of the polarizable density embedding (PDE) model-a new multiscale computational approach designed for prediction and rationalization of general molecular properties of large and complex systems. We showcase how the PDE model very effectively handles the use of large and diffuse basis sets that are otherwise questionable-due to electron spill-out effects-in standard embedding models. Based on our analysis, we find the PDE model to be robust and much more systematic than less sophisticated focused embedding models, and thus outline the PDE model as a very efficient and accurate approach to describe the electronic structure of ground and excited states as well as molecular properties of complex, heterogeneous systems.

Year:  2017        PMID: 29178794     DOI: 10.1021/acs.jpclett.7b02788

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  5 in total

1.  QM/MM Simulations with the Gaussian Electrostatic Model: A Density-based Polarizable Potential.

Authors:  Hatice Gökcan; Eric Kratz; Thomas A Darden; Jean-Philip Piquemal; G Andrés Cisneros
Journal:  J Phys Chem Lett       Date:  2018-05-23       Impact factor: 6.475

Review 2.  Frontiers in Multiscale Modeling of Photoreceptor Proteins.

Authors:  Maria-Andrea Mroginski; Suliman Adam; Gil S Amoyal; Avishai Barnoy; Ana-Nicoleta Bondar; Veniamin A Borin; Jonathan R Church; Tatiana Domratcheva; Bernd Ensing; Francesca Fanelli; Nicolas Ferré; Ofer Filiba; Laura Pedraza-González; Ronald González; Cristina E González-Espinoza; Rajiv K Kar; Lukas Kemmler; Seung Soo Kim; Jacob Kongsted; Anna I Krylov; Yigal Lahav; Michalis Lazaratos; Qays NasserEddin; Isabelle Navizet; Alexander Nemukhin; Massimo Olivucci; Jógvan Magnus Haugaard Olsen; Alberto Pérez de Alba Ortíz; Elisa Pieri; Aditya G Rao; Young Min Rhee; Niccolò Ricardi; Saumik Sen; Ilia A Solov'yov; Luca De Vico; Tomasz A Wesolowski; Christian Wiebeler; Xuchun Yang; Igor Schapiro
Journal:  Photochem Photobiol       Date:  2021-02-13       Impact factor: 3.521

3.  Two-Photon Absorption Cross-Sections in Fluorescent Proteins Containing Non-canonical Chromophores Using Polarizable QM/MM.

Authors:  Maria Rossano-Tapia; Jógvan Magnus Haugaard Olsen; Alex Brown
Journal:  Front Mol Biosci       Date:  2020-06-12

4.  Absorption Properties of Large Complex Molecular Systems: The DFTB/Fluctuating Charge Approach.

Authors:  Piero Lafiosca; Sara Gómez; Tommaso Giovannini; Chiara Cappelli
Journal:  J Chem Theory Comput       Date:  2022-02-20       Impact factor: 6.006

5.  Calculation of Linear and Non-linear Electric Response Properties of Systems in Aqueous Solution: A Polarizable Quantum/Classical Approach with Quantum Repulsion Effects.

Authors:  Gioia Marrazzini; Tommaso Giovannini; Franco Egidi; Chiara Cappelli
Journal:  J Chem Theory Comput       Date:  2020-10-15       Impact factor: 6.006

  5 in total

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