Literature DB >> 29177730

Type IA DNA Topoisomerases: A Universal Core and Multiple Activities.

Florence Garnier1, Hélène Debat1, Marc Nadal2.   

Abstract

All the type IA topoisomerases display universal characteristics relying on a core region basically responsible for the transesterification and the strand passage reaction. First limited to the bacterial domain for a long time, these enzymes were further retrieved in Archaea and Eukarya as well. This is representative of an extremely ancient origin, probably due to an inheritance from the RNA world. As remaining evidence, some current topoisomerases IA have retained a RNA topoisomerase activity. Despite the presence of this core region in all of these TopoIAs, some differences exist and are originated from variable regions, located essentially within both extremities, conferring on them their specificities. During the last 2 decades the evidence of multiple activities and dedicated roles highlighted the importance of the topoisomerases IA. It is now obvious that topoisomerases IA are key enzymes involved in the maintenance of the genome stability. The discovery of these new activities was done thanks to the use of more accurate assays, based on new sophisticated DNA substrates.

Keywords:  Reverse gyrase; Topoisomerase I; Topoisomerase III; Topoisomerases; Type 1A; topA; topB; toprim

Mesh:

Substances:

Year:  2018        PMID: 29177730     DOI: 10.1007/978-1-4939-7459-7_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

Review 1.  The many lives of type IA topoisomerases.

Authors:  Anna H Bizard; Ian D Hickson
Journal:  J Biol Chem       Date:  2020-04-10       Impact factor: 5.157

2.  Mechanistic insights from structure of Mycobacterium smegmatis topoisomerase I with ssDNA bound to both N- and C-terminal domains.

Authors:  Nan Cao; Kemin Tan; Xiaobing Zuo; Thirunavukkarasu Annamalai; Yuk-Ching Tse-Dinh
Journal:  Nucleic Acids Res       Date:  2020-05-07       Impact factor: 16.971

Review 3.  Recent developments in topoisomerase-targeted cancer chemotherapy.

Authors:  KirkE Hevener; Tatsiana A Verstak; Katie E Lutat; Daniel L Riggsbee; Jeremiah W Mooney
Journal:  Acta Pharm Sin B       Date:  2018-07-25       Impact factor: 11.413

Review 4.  Supercoiling, R-loops, Replication and the Functions of Bacterial Type 1A Topoisomerases.

Authors:  Julien Brochu; Émilie-Vlachos Breton; Marc Drolet
Journal:  Genes (Basel)       Date:  2020-02-27       Impact factor: 4.096

5.  Structural and biochemical basis for DNA and RNA catalysis by human Topoisomerase 3β.

Authors:  Xi Yang; Sourav Saha; Wei Yang; Keir C Neuman; Yves Pommier
Journal:  Nat Commun       Date:  2022-08-09       Impact factor: 17.694

6.  Microbial Type IA Topoisomerase C-Terminal Domain Sequence Motifs, Distribution and Combination.

Authors:  Brenda Diaz; Christopher Mederos; Kemin Tan; Yuk-Ching Tse-Dinh
Journal:  Int J Mol Sci       Date:  2022-08-05       Impact factor: 6.208

7.  Biochemical Basis of E. coli Topoisomerase I Relaxation Activity Reduction by Nonenzymatic Lysine Acetylation.

Authors:  Qingxuan Zhou; Mario E Gomez Hernandez; Francisco Fernandez-Lima; Yuk-Ching Tse-Dinh
Journal:  Int J Mol Sci       Date:  2018-05-11       Impact factor: 5.923

8.  Direct observation of helicase-topoisomerase coupling within reverse gyrase.

Authors:  Xi Yang; Florence Garnier; Hélène Débat; Terence R Strick; Marc Nadal
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-05       Impact factor: 11.205

9.  Topoisomerases I and III inhibit R-loop formation to prevent unregulated replication in the chromosomal Ter region of Escherichia coli.

Authors:  Julien Brochu; Émilie Vlachos-Breton; Sarah Sutherland; Makisha Martel; Marc Drolet
Journal:  PLoS Genet       Date:  2018-09-17       Impact factor: 5.917

  9 in total

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