Literature DB >> 2915928

Construction of mutant and chimeric genes using the polymerase chain reaction.

F Vallette1, E Mege, A Reiss, M Adesnik.   

Abstract

In the polymerase chain reaction (PCR) the specific amplification of a small segment of DNA within a complex DNA sample is effected by repeated cycles of DNA denaturation and enzymatic synthesis primed by two oligonucleotides complementary to regions within opposite strands of the DNA. In this report a simple and efficient method is described in which PCR methodology is used to introduce specific mutations into a double stranded DNA molecule. In this procedure a supercoiled plasmid DNA serves as template for a PCR in which a primer bearing the mutated sequence is incorporated into the amplified product. The presence of convenient restriction sites in the mutagenic primer and in the amplified DNA permit direct replacement of a wild type DNA segment with the mutated segment by treating the PCR mixture with the appropriate restriction endonucleases followed by DNA ligase. Using this procedure, a single amino acid replacement, a 16 amino acid deletion and a replacement of four amino acids with a twelve amino acid segment from another membrane protein were introduced into the amino terminal signal segment of rat hepatic cytochrome P450b (P450IIB1).

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Year:  1989        PMID: 2915928      PMCID: PMC331615          DOI: 10.1093/nar/17.2.723

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  23 in total

1.  A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions.

Authors:  R Higuchi; B Krummel; R K Saiki
Journal:  Nucleic Acids Res       Date:  1988-08-11       Impact factor: 16.971

2.  Generation of cDNA probes directed by amino acid sequence: cloning of urate oxidase.

Authors:  C C Lee; X W Wu; R A Gibbs; R G Cook; D M Muzny; C T Caskey
Journal:  Science       Date:  1988-03-11       Impact factor: 47.728

3.  Fidelity of DNA synthesis by the Thermus aquaticus DNA polymerase.

Authors:  K R Tindall; T A Kunkel
Journal:  Biochemistry       Date:  1988-08-09       Impact factor: 3.162

4.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

Authors:  R K Saiki; S Scharf; F Faloona; K B Mullis; G T Horn; H A Erlich; N Arnheim
Journal:  Science       Date:  1985-12-20       Impact factor: 47.728

5.  Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.

Authors:  R K Saiki; D H Gelfand; S Stoffel; S J Scharf; R Higuchi; G T Horn; K B Mullis; H A Erlich
Journal:  Science       Date:  1988-01-29       Impact factor: 47.728

6.  Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction.

Authors:  K B Mullis; F A Faloona
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

7.  HTLV-I-induced lymphoma mimicking Hodgkin's disease. Diagnosis by polymerase chain reaction amplification of specific HTLV-I sequences in tumor DNA.

Authors:  D B Duggan; G D Ehrlich; F P Davey; S Kwok; J Sninsky; J Goldberg; L Baltrucki; B J Poiesz
Journal:  Blood       Date:  1988-04       Impact factor: 22.113

8.  Stable expression of rat cytochrome P-450IIB1 cDNA in Chinese hamster cells (V79) and metabolic activation of aflatoxin B1.

Authors:  J Doehmer; S Dogra; T Friedberg; S Monier; M Adesnik; H Glatt; F Oesch
Journal:  Proc Natl Acad Sci U S A       Date:  1988-08       Impact factor: 11.205

9.  Analysis of RAS gene mutations in acute myeloid leukemia by polymerase chain reaction and oligonucleotide probes.

Authors:  C J Farr; R K Saiki; H A Erlich; F McCormick; C J Marshall
Journal:  Proc Natl Acad Sci U S A       Date:  1988-03       Impact factor: 11.205

10.  Signals for the incorporation and orientation of cytochrome P450 in the endoplasmic reticulum membrane.

Authors:  S Monier; P Van Luc; G Kreibich; D D Sabatini; M Adesnik
Journal:  J Cell Biol       Date:  1988-08       Impact factor: 10.539

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  54 in total

1.  The morphogenic linker peptide of HBV capsid protein forms a mobile array on the interior surface.

Authors:  Norman R Watts; James F Conway; Naiqian Cheng; Stephen J Stahl; David M Belnap; Alasdair C Steven; Paul T Wingfield
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

2.  Reversible oxidative modification as a mechanism for regulating retroviral protease dimerization and activation.

Authors:  David A Davis; Cara A Brown; Fonda M Newcomb; Emily S Boja; Henry M Fales; Joshua Kaufman; Stephen J Stahl; Paul Wingfield; Robert Yarchoan
Journal:  J Virol       Date:  2003-03       Impact factor: 5.103

3.  Site-directed, Ligase-Independent Mutagenesis (SLIM): a single-tube methodology approaching 100% efficiency in 4 h.

Authors:  Joyce Chiu; Paul E March; Ryan Lee; Daniel Tillett
Journal:  Nucleic Acids Res       Date:  2004-12-07       Impact factor: 16.971

4.  Non-fusion proteins expressed in E. coli: detection by alpha-complementation (blue/white selection).

Authors:  K Mensa-Wilmot; P T Englund
Journal:  Nucleic Acids Res       Date:  1992-01-11       Impact factor: 16.971

5.  Site-specific mutagenesis method which completely excludes wild-type DNA from the transformants.

Authors:  N Lee; J Liu; C He; D Testa
Journal:  Appl Environ Microbiol       Date:  1991-10       Impact factor: 4.792

6.  Activation of the Escherichia coli lacZ promoter by the Klebsiella aerogenes nitrogen assimilation control protein (NAC), a LysR family transcription factor.

Authors:  P J Pomposiello; R A Bender
Journal:  J Bacteriol       Date:  1995-08       Impact factor: 3.490

7.  The v-Src SH3 domain binds phosphatidylinositol 3'-kinase.

Authors:  X Liu; L E Marengere; C A Koch; T Pawson
Journal:  Mol Cell Biol       Date:  1993-09       Impact factor: 4.272

8.  In vivo analysis of sequence requirements for processing and degradation of the colicin A lysis protein signal peptide.

Authors:  S P Howard; L Lindsay
Journal:  J Bacteriol       Date:  1998-06       Impact factor: 3.490

9.  The human GRB2 and Drosophila Drk genes can functionally replace the Caenorhabditis elegans cell signaling gene sem-5.

Authors:  M J Stern; L E Marengere; R J Daly; E J Lowenstein; M Kokel; A Batzer; P Olivier; T Pawson; J Schlessinger
Journal:  Mol Biol Cell       Date:  1993-11       Impact factor: 4.138

10.  Mutations in v-Src SH3 and catalytic domains that jointly confer temperature-sensitive transformation with minimal temperature-dependent changes in cellular tyrosine phosphorylation.

Authors:  A D Catling; V J Fincham; M C Frame; B Haefner; J A Wyke
Journal:  J Virol       Date:  1994-07       Impact factor: 5.103

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