Literature DB >> 29158611

Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti.

F Sklenář1,2, Ž Jurjević3, P Zalar4, J C Frisvad5, C M Visagie6,7, M Kolařík1,2, J Houbraken8, A J Chen8,9, N Yilmaz6,7, K A Seifert6,7, M Coton10, F Déniel10, N Gunde-Cimerman4, R A Samson8, S W Peterson11, V Hubka1,2,12.   

Abstract

Aspergillus section Restricti together with sister section Aspergillus (formerly Eurotium) comprises xerophilic species, that are able to grow on substrates with low water activity and in extreme environments. We adressed the monophyly of both sections within subgenus Aspergillus and applied a multidisciplinary approach for definition of species boundaries in sect. Restricti. The monophyly of sections Aspergillus and Restricti was tested on a set of 102 isolates comprising all currently accepted species and was strongly supported by Maximum likelihood (ML) and Bayesian inferrence (BI) analysis based on β-tubulin (benA), calmodulin (CaM) and RNA polymerase II second largest subunit (RPB2) loci. More than 300 strains belonging to sect. Restricti from various isolation sources and four continents were characterized by DNA sequencing, and 193 isolates were selected for phylogenetic analyses and phenotypic studies. Species delimitation methods based on multispecies coalescent model were employed on DNA sequences from four loci, i.e., ID region of rDNA (ITS + 28S), CaM, benA and RPB2, and supported recognition of 21 species, including 14 new. All these species were also strongly supported in ML and BI analyses. All recognised species can be reliably identified by all four examined genetic loci. Phenotype analysis was performed to support the delimitation of new species and includes colony characteristics on seven cultivation media incubated at several temperatures, growth on an osmotic gradient (six media with NaCl concentration from 0 to 25 %) and analysis of morphology including scanning electron microscopy. The micromorphology of conidial heads, vesicle dimensions, temperature profiles and growth parameters in osmotic gradient were useful criteria for species identification. The vast majority of species in sect. Restricti produce asperglaucide, asperphenamate or both in contrast to species in sect. Aspergillus. Mycophenolic acid was detected for the first time in at least six members of the section. The ascomata of A. halophilicus do not contain auroglaucin, epiheveadride or flavoglaucin which are common in sect. Aspergillus, but shares the echinulins with sect. Aspergillus.

Entities:  

Keywords:  Aspergillus canadensis Visagie, Yilmaz, F. Sklenar & Seifert; Aspergillus clavatophorus F. Sklenar, S.W. Peterson & Hubka; Aspergillus destruens Zalar, F. Sklenar, S.W. Peterson & Hubka; Aspergillus domesticus F. Sklenar, Houbraken, Zalar & Hubka; Aspergillus glabripes F. Sklenar, Ž. Jurjević & Hubka; Aspergillus hordei F. Sklenar, S.W. Peterson & Hubka; Aspergillus infrequens F. Sklenar, S.W. Peterson & Hubka; Aspergillus magnivesiculatus F. Sklenar, Zalar, Ž. Jurjević & Hubka; Aspergillus pachycaulis F. Sklenar, S.W. Peterson, Ž. Jurjević & Hubka; Aspergillus penicillioides; Aspergillus pseudogracilis F. Sklenar, Ž. Jurjević & Hubka; Aspergillus restrictus; Aspergillus reticulatus F. Sklenar, Ž. Jurjević, S.W. Peterson & Hubka; Aspergillus salinicola Zalar, F. Sklenar, Visagie & Hubka; Aspergillus tardicrescens F. Sklenar, Houbraken, Zalar, & Hubka; Aspergillus villosus F. Sklenar, S.W. Peterson & Hubka; Eurotium; food spoilage; indoor fungi; linear discriminant analysis; multigene phylogeny; multispecies coalescent model; sick building syndrome; xerophilic fungi

Year:  2017        PMID: 29158611      PMCID: PMC5678892          DOI: 10.1016/j.simyco.2017.09.002

Source DB:  PubMed          Journal:  Stud Mycol        ISSN: 0166-0616            Impact factor:   16.097


  79 in total

1.  Dereplication of microbial natural products by LC-DAD-TOFMS.

Authors:  Kristian F Nielsen; Maria Månsson; Christian Rank; Jens Christian Frisvad; Thomas O Larsen
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2.  Relationships between mite allergen levels, mold concentrations, and sick building syndrome symptoms in newly built dwellings in Japan.

Authors:  Y Saijo; A Kanazawa; A Araki; K Morimoto; K Nakayama; T Takigawa; M Tanaka; E Shibata; T Yoshimura; H Chikara; R Kishi
Journal:  Indoor Air       Date:  2010-12-28       Impact factor: 5.770

3.  Determining species boundaries in a world full of rarity: singletons, species delimitation methods.

Authors:  Gwynne S Lim; Michael Balke; Rudolf Meier
Journal:  Syst Biol       Date:  2011-04-11       Impact factor: 15.683

4.  DensiTree: making sense of sets of phylogenetic trees.

Authors:  Remco R Bouckaert
Journal:  Bioinformatics       Date:  2010-03-12       Impact factor: 6.937

5.  Revision of Aspergillus section Flavipedes: seven new species and proposal of section Jani sect. nov.

Authors:  Vit Hubka; Alena Nováková; Miroslav Kolařík; Željko Jurjević; Stephen W Peterson
Journal:  Mycologia       Date:  2014-10-24       Impact factor: 2.696

6.  Regulation of restrictocin production in Aspergillus restrictus.

Authors:  R Yang; W R Kenealy
Journal:  J Gen Microbiol       Date:  1992-07

Review 7.  Sick Building Syndrome: is mould the cause?

Authors:  Abba I Terr
Journal:  Med Mycol       Date:  2009-03-02       Impact factor: 4.076

Review 8.  Modern taxonomy of biotechnologically important Aspergillus and Penicillium species.

Authors:  Jos Houbraken; Ronald P de Vries; Robert A Samson
Journal:  Adv Appl Microbiol       Date:  2014       Impact factor: 5.086

9.  Talaromyces columbinus sp. nov., and genealogical concordance analysis in Talaromyces clade 2a.

Authors:  Stephen W Peterson; Zeljko Jurjević
Journal:  PLoS One       Date:  2013-10-30       Impact factor: 3.240

10.  Phylogenetic estimation error can decrease the accuracy of species delimitation: a Bayesian implementation of the general mixed Yule-coalescent model.

Authors:  Noah M Reid; Bryan C Carstens
Journal:  BMC Evol Biol       Date:  2012-10-02       Impact factor: 3.260

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  16 in total

1.  Aspergillus loretoensis, a single isolate from marine sediment of Loreto Bay, Baja California Sur, México resulting as a new obligate halophile species.

Authors:  Sophia González-Martínez; Clara Galindo-Sánchez; Edgar López-Landavery; Carmen Paniagua-Chávez; Amelia Portillo-López
Journal:  Extremophiles       Date:  2019-06-21       Impact factor: 2.395

Review 2.  Aspergillus fumigatus and aspergillosis: From basics to clinics.

Authors:  A Arastehfar; A Carvalho; J Houbraken; L Lombardi; R Garcia-Rubio; J D Jenks; O Rivero-Menendez; R Aljohani; I D Jacobsen; J Berman; N Osherov; M T Hedayati; M Ilkit; D James-Armstrong; T Gabaldón; J Meletiadis; M Kostrzewa; W Pan; C Lass-Flörl; D S Perlin; M Hoenigl
Journal:  Stud Mycol       Date:  2021-05-10       Impact factor: 16.097

3.  Classification of Aspergillus, Penicillium, Talaromyces and related genera (Eurotiales): An overview of families, genera, subgenera, sections, series and species.

Authors:  J Houbraken; S Kocsubé; C M Visagie; N Yilmaz; X-C Wang; M Meijer; B Kraak; V Hubka; K Bensch; R A Samson; J C Frisvad
Journal:  Stud Mycol       Date:  2020-06-27       Impact factor: 16.097

4.  Polyphasic taxonomy of Aspergillus section Aspergillus (formerly Eurotium), and its occurrence in indoor environments and food.

Authors:  A J Chen; V Hubka; J C Frisvad; C M Visagie; J Houbraken; M Meijer; J Varga; R Demirel; Ž Jurjević; A Kubátová; F Sklenář; Y G Zhou; R A Samson
Journal:  Stud Mycol       Date:  2017-07-12       Impact factor: 16.097

5.  Aspergillus subgenus Polypaecilum from the built environment.

Authors:  J B Tanney; C M Visagie; N Yilmaz; K A Seifert
Journal:  Stud Mycol       Date:  2017-11-13       Impact factor: 16.097

6.  Unravelling species boundaries in the Aspergillus viridinutans complex (section Fumigati): opportunistic human and animal pathogens capable of interspecific hybridization.

Authors:  V Hubka; V Barrs; Z Dudová; F Sklenář; A Kubátová; T Matsuzawa; T Yaguchi; Y Horie; A Nováková; J C Frisvad; J J Talbot; M Kolařík
Journal:  Persoonia       Date:  2018-06-21       Impact factor: 11.051

7.  Stress Reshapes the Physiological Response of Halophile Fungi to Salinity.

Authors:  Yordanis Pérez-Llano; Eya Caridad Rodríguez-Pupo; Irina S Druzhinina; Komal Chenthamara; Feng Cai; Nina Gunde-Cimerman; Polona Zalar; Cene Gostinčar; Rok Kostanjšek; Jorge Luis Folch-Mallol; Ramón Alberto Batista-García; María Del Rayo Sánchez-Carbente
Journal:  Cells       Date:  2020-02-25       Impact factor: 6.600

8.  A new family and genus in Dothideales for Aureobasidium-like species isolated from house dust.

Authors:  Zoë Humphries; Keith A Seifert; Yuuri Hirooka; Cobus M Visagie
Journal:  IMA Fungus       Date:  2017-10-26       Impact factor: 3.515

9.  Big Sound and Extreme Fungi-Xerophilic, Halotolerant Aspergilli and Penicillia with Low Optimal Temperature as Invaders of Historic Pipe Organs.

Authors:  Katja Sterflinger; Christian Voitl; Ksenija Lopandic; Guadalupe Piñar; Hakim Tafer
Journal:  Life (Basel)       Date:  2018-06-14

Review 10.  Taxonomy and evolution of Aspergillus, Penicillium and Talaromyces in the omics era - Past, present and future.

Authors:  Chi-Ching Tsang; James Y M Tang; Susanna K P Lau; Patrick C Y Woo
Journal:  Comput Struct Biotechnol J       Date:  2018-05-31       Impact factor: 7.271

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