Literature DB >> 29157119

Biomarker combinations for diagnosis and prognosis in multicenter studies: Principles and methods.

Allison Meisner1, Chirag R Parikh2,3, Kathleen F Kerr4.   

Abstract

Many investigators are interested in combining biomarkers to predict a binary outcome or detect underlying disease. This endeavor is complicated by the fact that many biomarker studies involve data from multiple centers. Depending upon the relationship between center, the biomarkers, and the target of prediction, care must be taken when constructing and evaluating combinations of biomarkers. We introduce a taxonomy to describe the role of center and consider how a biomarker combination should be constructed and evaluated. We show that ignoring center, which is frequently done by clinical researchers, is often not appropriate. The limited statistical literature proposes using random intercept logistic regression models, an approach that we demonstrate is generally inadequate and may be misleading. We instead propose using fixed intercept logistic regression, which appropriately accounts for center without relying on untenable assumptions. After constructing the biomarker combination, we recommend using performance measures that account for the multicenter nature of the data, namely the center-adjusted area under the receiver operating characteristic curve. We apply these methods to data from a multicenter study of acute kidney injury after cardiac surgery. Appropriately accounting for center, both in construction and evaluation, may increase the likelihood of identifying clinically useful biomarker combinations.

Entities:  

Keywords:  Biomarkers; combinations; diagnosis; multicenter; prognosis

Mesh:

Substances:

Year:  2017        PMID: 29157119     DOI: 10.1177/0962280217740392

Source DB:  PubMed          Journal:  Stat Methods Med Res        ISSN: 0962-2802            Impact factor:   3.021


  8 in total

1.  Identification and validation of aging-related genes in COPD based on bioinformatics analysis.

Authors:  Shan Zhong; Li Yang; Naijia Liu; Guangkeng Zhou; Zhangli Hu; Chengshui Chen; Yun Wang
Journal:  Aging (Albany NY)       Date:  2022-05-24       Impact factor: 5.955

Review 2.  Molecular Imaging Probes Based on Matrix Metalloproteinase Inhibitors (MMPIs).

Authors:  Loganathan Rangasamy; Bruno Di Geronimo; Irene Ortín; Claire Coderch; José María Zapico; Ana Ramos; Beatriz de Pascual-Teresa
Journal:  Molecules       Date:  2019-08-16       Impact factor: 4.411

Review 3.  Untapped potential of multicenter studies: a review of cardiovascular risk prediction models revealed inappropriate analyses and wide variation in reporting.

Authors:  L Wynants; D M Kent; D Timmerman; C M Lundquist; B Van Calster
Journal:  Diagn Progn Res       Date:  2019-02-22

4.  Developing Biomarker Panels to Predict Progression of Acute Kidney Injury After Cardiac Surgery.

Authors:  Kathleen F Kerr; Eric R Morenz; Jeremy Roth; Heather Thiessen-Philbrook; Steven G Coca; Chirag R Parikh
Journal:  Kidney Int Rep       Date:  2019-08-30

5.  Standardization of SYBR Green-Based Real-Time PCR Through the Evaluation of Different Thresholds for Different Skin Layers: An Accuracy Study and Track of the Transmission Potential of Multibacillary and Paucibacillary Leprosy Patients.

Authors:  Lais Sevilha-Santos; Selma Regina Penha Silva Cerqueira; Ciro Martins Gomes
Journal:  Front Microbiol       Date:  2021-12-07       Impact factor: 5.640

6.  Salivary Biomarkers in Periodontitis Patients: A Pilot Study.

Authors:  Sarah Reddahi; Amal Bouziane; Sana Rida; Houssain Tligui; Oumkeltoum Ennibi
Journal:  Int J Dent       Date:  2022-03-24

7.  Developing risk models for multicenter data using standard logistic regression produced suboptimal predictions: A simulation study.

Authors:  Nora Falconieri; Ben Van Calster; Dirk Timmerman; Laure Wynants
Journal:  Biom J       Date:  2020-01-20       Impact factor: 2.207

8.  Single-center versus multi-center data sets for molecular prognostic modeling: a simulation study.

Authors:  Daniel Samaga; Roman Hornung; Herbert Braselmann; Julia Hess; Horst Zitzelsberger; Claus Belka; Anne-Laure Boulesteix; Kristian Unger
Journal:  Radiat Oncol       Date:  2020-05-14       Impact factor: 3.481

  8 in total

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