| Literature DB >> 29152364 |
Wayland E Noland1, Janel L Rieger1, Zoe H Tu1, Kenneth J Tritch1.
Abstract
The title co-crystal, C8H3Br2NO2·0.5C14H10, was self-assembled from a 2:1 mixture of the components in slowly evaporating di-chloro-methane. The mol-ecules adopt a sheet structure parallel to (1-12) in which carb-oxy hydrogen-bonded dimers and anthracene mol-ecules stagger in both dimensions. Within the sheets, six individual cyano acid mol-ecules surround each anthracene mol-ecule. Cyano acid mol-ecules form one of the two possible R22(10) rings between neighboring cyano and bromo groups. Compared to the di-chloro analog [Britton (2012 ▸). J. Chem. Crystallogr.42, 851-855], the dihedral angle between the best-fit planes of acid and anthracene mol-ecules has decreased from 7.1 to 0.9 (2)°.Entities:
Keywords: N⋯Br contacts; carboxylic acid; co-crystal; crystal structure
Year: 2017 PMID: 29152364 PMCID: PMC5683504 DOI: 10.1107/S2056989017014815
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1(a) The honeycomb-like structure envisioned by Doyle Britton. (b) A 2:1 co-crystal of 3,5-dichloro-4-cyanobenzoic acid with anthracene, viewed along 28 (Britton, 2012 ▸). Magenta dashed lines represent short contacts.
Figure 2The molecular structures of the components of the title co-crystal, with atom labeling and displacement ellipsoids at the 50% probability level. Only the symmetry-unique 3,5-dibromo-4-cyanobenzoic acid molecule is shown. Unlabeled anthracene atoms are generated by the (–x, –y, –z) symmetry operation.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1 | 0.84 | 1.79 | 2.627 (2) | 178 |
Symmetry code: (i) .
Contact geometry (Å, °)
| C— | C— |
| C— |
|---|---|---|---|
| C6≡N1⋯Br2ii | 1.143 (4) | 3.307 (2) | 115.9 (2) |
| C4—Br1⋯Br1iii | 1.886 (2) | 3.5534 (5) | 133.43 (7) |
Symmetry codes: (ii) −x + 2, −y + 1, −z + 2; (iii) −x + 1, −y, −z + 2.
Figure 3The sheet structure observed in the title co-crystal, viewed along [011].
Figure 4Selected structures from the database survey.
Figure 5The three-step synthesis of the title cyano acid (VII).
Experimental details
| Crystal data | |
| Chemical formula | C8H3Br2NO2·0.5C14H10 |
|
| 394.04 |
| Crystal system, space group | Triclinic, |
| Temperature (K) | 123 |
|
| 8.8963 (8), 9.4701 (9), 9.5839 (9) |
| α, β, γ (°) | 115.356 (3), 106.876 (3), 94.119 (3) |
|
| 680.03 (11) |
|
| 2 |
| Radiation type | Cu |
| μ (mm−1) | 7.57 |
| Crystal size (mm) | 0.18 × 0.09 × 0.03 |
| Data collection | |
| Diffractometer | Bruker VENTURE PHOTON-1000 |
| Absorption correction | Multi-scan ( |
|
| 0.509, 0.754 |
| No. of measured, independent and observed [ | 9139, 2745, 2607 |
|
| 0.035 |
| (sin θ/λ)max (Å−1) | 0.625 |
| Refinement | |
|
| 0.026, 0.068, 1.06 |
| No. of reflections | 2745 |
| No. of parameters | 182 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.40, −0.53 |
Computer programs: APEX2 and SAINT (Bruker, 2012 ▸), SHELXS97 (Sheldrick 2015a ▸), SHELXL2014 (Sheldrick, 2015b ▸), Mercury (Macrae et al., 2008 ▸) and publCIF (Westrip, 2010 ▸).
| C8H3Br2NO2·0.5C14H10 | |
| Triclinic, | |
| Cu | |
| Cell parameters from 2967 reflections | |
| θ = 5.3–74.6° | |
| α = 115.356 (3)° | µ = 7.57 mm−1 |
| β = 106.876 (3)° | |
| γ = 94.119 (3)° | Plate, pale orange |
| 0.18 × 0.09 × 0.03 mm |
| Bruker VENTURE PHOTON-1000 diffractometer | 2607 reflections with |
| φ and ω scans | |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | θmax = 74.6°, θmin = 5.3° |
| 9139 measured reflections | |
| 2745 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 2745 reflections | Δρmax = 0.40 e Å−3 |
| 182 parameters | Δρmin = −0.53 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Br1 | 0.38562 (3) | 0.12356 (3) | 0.93908 (3) | 0.01483 (9) | |
| Br2 | 0.81803 (2) | 0.51847 (3) | 0.84679 (3) | 0.01686 (9) | |
| O1 | 0.21809 (18) | 0.54610 (19) | 0.5615 (2) | 0.0154 (3) | |
| H1A | 0.1338 | 0.5671 | 0.5146 | 0.023* | |
| O2 | 0.04198 (18) | 0.38413 (18) | 0.5858 (2) | 0.0139 (3) | |
| N1 | 0.8230 (2) | 0.2641 (3) | 1.0526 (3) | 0.0211 (4) | |
| C1 | 0.1800 (3) | 0.4429 (2) | 0.6097 (3) | 0.0102 (4) | |
| C2 | 0.3217 (2) | 0.4018 (2) | 0.7011 (2) | 0.0092 (4) | |
| C3 | 0.2929 (2) | 0.2999 (2) | 0.7650 (2) | 0.0096 (4) | |
| H3A | 0.1859 | 0.2573 | 0.7495 | 0.011* | |
| C4 | 0.4229 (3) | 0.2615 (2) | 0.8516 (2) | 0.0100 (4) | |
| C5 | 0.5815 (2) | 0.3249 (2) | 0.8767 (2) | 0.0102 (4) | |
| C6 | 0.7162 (3) | 0.2888 (3) | 0.9728 (3) | 0.0135 (4) | |
| C7 | 0.6057 (3) | 0.4265 (3) | 0.8107 (3) | 0.0116 (4) | |
| C8 | 0.4777 (3) | 0.4647 (2) | 0.7223 (2) | 0.0103 (4) | |
| H8A | 0.4958 | 0.5328 | 0.6766 | 0.012* | |
| C9 | 0.4142 (3) | 0.8993 (2) | 0.5372 (3) | 0.0131 (4) | |
| H9A | 0.3562 | 0.8307 | 0.5622 | 0.016* | |
| C10 | 0.5827 (3) | 0.9268 (2) | 0.5908 (3) | 0.0126 (4) | |
| C11 | 0.6714 (3) | 0.8552 (3) | 0.6831 (3) | 0.0179 (5) | |
| H11A | 0.6149 | 0.7875 | 0.7102 | 0.022* | |
| C12 | 0.8344 (3) | 0.8823 (3) | 0.7326 (3) | 0.0230 (5) | |
| H12A | 0.8912 | 0.8345 | 0.7947 | 0.028* | |
| C13 | 0.9206 (3) | 0.9822 (3) | 0.6915 (3) | 0.0247 (5) | |
| H13A | 1.0347 | 0.9989 | 0.7249 | 0.030* | |
| C14 | 0.8420 (3) | 1.0540 (3) | 0.6055 (3) | 0.0198 (5) | |
| H14A | 0.9019 | 1.1211 | 0.5803 | 0.024* | |
| C15 | 0.6700 (3) | 1.0296 (2) | 0.5522 (3) | 0.0121 (4) |
| Br1 | 0.01625 (14) | 0.01597 (13) | 0.01776 (14) | 0.00482 (9) | 0.00336 (10) | 0.01426 (10) |
| Br2 | 0.00653 (13) | 0.02493 (15) | 0.02190 (14) | 0.00266 (9) | 0.00341 (10) | 0.01464 (11) |
| O1 | 0.0098 (7) | 0.0197 (8) | 0.0244 (8) | 0.0037 (6) | 0.0021 (6) | 0.0196 (7) |
| O2 | 0.0079 (7) | 0.0163 (7) | 0.0211 (8) | 0.0027 (6) | 0.0017 (6) | 0.0141 (6) |
| N1 | 0.0163 (10) | 0.0255 (10) | 0.0221 (10) | 0.0110 (8) | 0.0021 (8) | 0.0136 (9) |
| C1 | 0.0104 (10) | 0.0099 (9) | 0.0095 (9) | 0.0028 (7) | 0.0010 (7) | 0.0053 (7) |
| C2 | 0.0092 (9) | 0.0086 (9) | 0.0081 (9) | 0.0037 (7) | −0.0007 (7) | 0.0046 (7) |
| C3 | 0.0084 (9) | 0.0091 (9) | 0.0107 (9) | 0.0020 (7) | 0.0014 (7) | 0.0054 (7) |
| C4 | 0.0115 (10) | 0.0100 (9) | 0.0090 (9) | 0.0045 (7) | 0.0011 (8) | 0.0062 (8) |
| C5 | 0.0080 (9) | 0.0111 (9) | 0.0082 (9) | 0.0045 (7) | −0.0005 (7) | 0.0035 (8) |
| C6 | 0.0117 (10) | 0.0140 (10) | 0.0131 (10) | 0.0048 (8) | 0.0025 (8) | 0.0059 (8) |
| C7 | 0.0088 (9) | 0.0128 (9) | 0.0112 (9) | 0.0016 (7) | 0.0028 (8) | 0.0044 (8) |
| C8 | 0.0113 (9) | 0.0095 (9) | 0.0108 (9) | 0.0021 (7) | 0.0025 (8) | 0.0063 (8) |
| C9 | 0.0162 (10) | 0.0082 (9) | 0.0148 (10) | 0.0001 (8) | 0.0070 (8) | 0.0047 (8) |
| C10 | 0.0172 (11) | 0.0081 (9) | 0.0113 (9) | 0.0016 (8) | 0.0056 (8) | 0.0033 (8) |
| C11 | 0.0245 (12) | 0.0125 (10) | 0.0156 (10) | 0.0033 (9) | 0.0049 (9) | 0.0069 (9) |
| C12 | 0.0257 (13) | 0.0167 (11) | 0.0196 (11) | 0.0055 (9) | −0.0010 (10) | 0.0082 (9) |
| C13 | 0.0135 (11) | 0.0222 (12) | 0.0276 (13) | 0.0018 (9) | 0.0007 (9) | 0.0071 (10) |
| C14 | 0.0131 (11) | 0.0152 (11) | 0.0261 (12) | −0.0012 (8) | 0.0052 (9) | 0.0072 (9) |
| C15 | 0.0138 (10) | 0.0073 (9) | 0.0131 (9) | 0.0000 (7) | 0.0057 (8) | 0.0027 (8) |
| Br1—C4 | 1.886 (2) | C8—H8A | 0.9500 |
| Br2—C7 | 1.890 (2) | C9—C15i | 1.394 (3) |
| O1—C1 | 1.309 (3) | C9—C10 | 1.400 (3) |
| O1—H1A | 0.8400 | C9—H9A | 0.9500 |
| O2—C1 | 1.224 (3) | C10—C11 | 1.432 (3) |
| N1—C6 | 1.142 (3) | C10—C15 | 1.432 (3) |
| C1—C2 | 1.493 (3) | C11—C12 | 1.356 (4) |
| C2—C3 | 1.390 (3) | C11—H11A | 0.9500 |
| C2—C8 | 1.391 (3) | C12—C13 | 1.423 (4) |
| C3—C4 | 1.386 (3) | C12—H12A | 0.9500 |
| C3—H3A | 0.9500 | C13—C14 | 1.359 (4) |
| C4—C5 | 1.402 (3) | C13—H13A | 0.9500 |
| C5—C7 | 1.394 (3) | C14—C15 | 1.433 (3) |
| C5—C6 | 1.446 (3) | C14—H14A | 0.9500 |
| C7—C8 | 1.381 (3) | C15—C9i | 1.394 (3) |
| C1—O1—H1A | 109.5 | C2—C8—H8A | 120.5 |
| O2—C1—O1 | 124.6 (2) | C15i—C9—C10 | 121.3 (2) |
| O2—C1—C2 | 121.29 (19) | C15i—C9—H9A | 119.4 |
| O1—C1—C2 | 114.08 (18) | C10—C9—H9A | 119.4 |
| C3—C2—C8 | 121.22 (19) | C9—C10—C11 | 122.1 (2) |
| C3—C2—C1 | 117.98 (18) | C9—C10—C15 | 119.3 (2) |
| C8—C2—C1 | 120.80 (19) | C11—C10—C15 | 118.6 (2) |
| C4—C3—C2 | 118.88 (19) | C12—C11—C10 | 121.2 (2) |
| C4—C3—H3A | 120.6 | C12—C11—H11A | 119.4 |
| C2—C3—H3A | 120.6 | C10—C11—H11A | 119.4 |
| C3—C4—C5 | 121.09 (19) | C11—C12—C13 | 120.0 (2) |
| C3—C4—Br1 | 119.34 (16) | C11—C12—H12A | 120.0 |
| C5—C4—Br1 | 119.57 (15) | C13—C12—H12A | 120.0 |
| C7—C5—C4 | 118.42 (19) | C14—C13—C12 | 121.0 (2) |
| C7—C5—C6 | 121.09 (19) | C14—C13—H13A | 119.5 |
| C4—C5—C6 | 120.47 (19) | C12—C13—H13A | 119.5 |
| N1—C6—C5 | 178.1 (2) | C13—C14—C15 | 120.7 (2) |
| C8—C7—C5 | 121.37 (19) | C13—C14—H14A | 119.7 |
| C8—C7—Br2 | 119.04 (16) | C15—C14—H14A | 119.7 |
| C5—C7—Br2 | 119.57 (16) | C9i—C15—C10 | 119.5 (2) |
| C7—C8—C2 | 119.02 (19) | C9i—C15—C14 | 122.1 (2) |
| C7—C8—H8A | 120.5 | C10—C15—C14 | 118.5 (2) |
| O2—C1—C2—C3 | −2.9 (3) | Br2—C7—C8—C2 | −177.60 (15) |
| O1—C1—C2—C3 | 176.48 (18) | C3—C2—C8—C7 | −1.0 (3) |
| O2—C1—C2—C8 | 177.60 (19) | C1—C2—C8—C7 | 178.55 (18) |
| O1—C1—C2—C8 | −3.1 (3) | C15i—C9—C10—C11 | 179.81 (19) |
| C8—C2—C3—C4 | 0.2 (3) | C15i—C9—C10—C15 | −0.3 (3) |
| C1—C2—C3—C4 | −179.35 (18) | C9—C10—C11—C12 | 179.4 (2) |
| C2—C3—C4—C5 | 0.6 (3) | C15—C10—C11—C12 | −0.5 (3) |
| C2—C3—C4—Br1 | 179.97 (14) | C10—C11—C12—C13 | −0.6 (4) |
| C3—C4—C5—C7 | −0.7 (3) | C11—C12—C13—C14 | 1.2 (4) |
| Br1—C4—C5—C7 | 180.00 (14) | C12—C13—C14—C15 | −0.7 (4) |
| C3—C4—C5—C6 | 177.55 (18) | C9—C10—C15—C9i | 0.3 (3) |
| Br1—C4—C5—C6 | −1.8 (3) | C11—C10—C15—C9i | −179.81 (19) |
| C4—C5—C7—C8 | −0.1 (3) | C9—C10—C15—C14 | −178.88 (19) |
| C6—C5—C7—C8 | −178.35 (19) | C11—C10—C15—C14 | 1.0 (3) |
| C4—C5—C7—Br2 | 178.40 (14) | C13—C14—C15—C9i | −179.6 (2) |
| C6—C5—C7—Br2 | 0.2 (3) | C13—C14—C15—C10 | −0.4 (3) |
| C5—C7—C8—C2 | 1.0 (3) |
| H··· | ||||
| O1—H1 | 0.84 | 1.79 | 2.627 (2) | 178 |