| Literature DB >> 29152346 |
Andrei V Churakov1, Petr V Prikhodchenko1, Alexander G Medvedev1, Alexey A Mikhaylov1.
Abstract
The title adduct, C14H13NO·H2O2, consists of (Z)-N-benzyl-idene-1-phenyl-methanamine oxide and hydrogen peroxide mol-ecules in a 1:1 ratio. The organic coformer adopts a skew geometry with an inter-aryl-ring dihedral angle of 81.9 (2)°. In the crystal, the organic and peroxide mol-ecules are linked through both peroxide O-H donor groups to oxide O-atom acceptors, giving one-dimensional chains extending along the b axis. Present also are weak inter-molecular C-H⋯O hydrogen-bonding inter-actions.Entities:
Keywords: N-oxide; crystal structure; hydrogen-bond motif; nitrone; peroxosolvate
Year: 2017 PMID: 29152346 PMCID: PMC5683486 DOI: 10.1107/S2056989017014499
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The asymmetric unit in the title structure. Displacement ellipsoids are shown at the 50% probability level and the hydrogen bond is drawn as a dashed line.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯O3 | 1.05 (5) | 1.66 (5) | 2.707 (5) | 174 (4) |
| O2—H2⋯O3i | 1.06 (5) | 1.64 (5) | 2.681 (5) | 166 (4) |
| C21—H21⋯O1ii | 0.95 | 2.46 | 3.304 (6) | 148 |
| C27—H27⋯O3 | 0.95 | 2.29 | 2.902 (6) | 121 |
| C11—H111⋯O1ii | 0.99 | 2.44 | 3.364 (7) | 155 |
| C11—H111⋯O2ii | 0.99 | 2.47 | 3.394 (7) | 155 |
| C11—H112⋯O2 | 0.99 | 2.52 | 3.407 (7) | 149 |
Symmetry codes: (i) ; (ii) .
Figure 2Hydrogen-bonded chains extending along the b axis. H atoms on C atoms have been omitted for clarity. Hydrogen bonds are drawn as dashed lines.
Figure 3Hydrogen-bonded motifs in the structures of N- and P-oxides.
Experimental details
| Crystal data | |
| Chemical formula | C14H13NO·H2O2 |
|
| 245.27 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 150 |
|
| 21.802 (15), 4.597 (3), 12.742 (9) |
| β (°) | 97.598 (11) |
|
| 1265.8 (16) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 0.09 |
| Crystal size (mm) | 0.40 × 0.04 × 0.04 |
| Data collection | |
| Diffractometer | Bruker |
| Absorption correction | Multi-scan ( |
|
| 0.965, 0.996 |
| No. of measured, independent and observed [ | 7458, 2227, 1113 |
|
| 0.108 |
| (sin θ/λ)max (Å−1) | 0.596 |
| Refinement | |
|
| 0.077, 0.218, 1.05 |
| No. of reflections | 2227 |
| No. of parameters | 172 |
| No. of restraints | 1 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.27, −0.26 |
Computer programs: APEX2 (Bruker, 2008 ▸), SAINT (Bruker, 2008 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL97 (Sheldrick, 2008 ▸), SHELXTL (Sheldrick, 2008 ▸).
| C14H13NO·H2O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 737 reflections |
| θ = 3.2–21.9° | |
| µ = 0.09 mm−1 | |
| β = 97.598 (11)° | Needle, colourless |
| 0.40 × 0.04 × 0.04 mm | |
| Bruker SMART APEXII area-detector diffractometer | 2227 independent reflections |
| Radiation source: fine-focus sealed tube | 1113 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 25.1°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Bruker, 2008) | |
| 7458 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2227 reflections | Δρmax = 0.27 e Å−3 |
| 172 parameters | Δρmin = −0.26 e Å−3 |
| 1 restraint | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.034 (6) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.23321 (15) | 0.7522 (7) | 1.0077 (3) | 0.0427 (9) | |
| O2 | 0.28942 (16) | 0.9116 (7) | 0.9911 (3) | 0.0442 (10) | |
| O3 | 0.22608 (15) | 0.3093 (6) | 0.8666 (2) | 0.0377 (9) | |
| N1 | 0.23366 (18) | 0.3713 (7) | 0.7676 (3) | 0.0319 (10) | |
| C11 | 0.2883 (2) | 0.5529 (9) | 0.7569 (4) | 0.0342 (12) | |
| H112 | 0.2894 | 0.7210 | 0.8057 | 0.041* | |
| H111 | 0.2855 | 0.6284 | 0.6836 | 0.041* | |
| C12 | 0.3463 (2) | 0.3775 (9) | 0.7821 (4) | 0.0344 (12) | |
| C13 | 0.3802 (2) | 0.3866 (10) | 0.8826 (4) | 0.0438 (13) | |
| H13 | 0.3672 | 0.5083 | 0.9356 | 0.053* | |
| C14 | 0.4332 (2) | 0.2183 (12) | 0.9054 (5) | 0.0573 (16) | |
| H14 | 0.4563 | 0.2229 | 0.9741 | 0.069* | |
| C15 | 0.4521 (3) | 0.0431 (12) | 0.8270 (5) | 0.0592 (17) | |
| H15 | 0.4888 | −0.0694 | 0.8422 | 0.071* | |
| C16 | 0.4190 (2) | 0.0295 (12) | 0.7281 (5) | 0.0521 (15) | |
| H16 | 0.4317 | −0.0952 | 0.6756 | 0.063* | |
| C17 | 0.3671 (2) | 0.1997 (10) | 0.7062 (4) | 0.0423 (13) | |
| H17 | 0.3447 | 0.1954 | 0.6370 | 0.051* | |
| C21 | 0.1988 (2) | 0.2713 (9) | 0.6851 (4) | 0.0334 (11) | |
| H21 | 0.2083 | 0.3366 | 0.6184 | 0.040* | |
| C22 | 0.1470 (2) | 0.0714 (9) | 0.6825 (4) | 0.0330 (12) | |
| C23 | 0.1155 (2) | 0.0141 (11) | 0.5825 (4) | 0.0432 (13) | |
| H23 | 0.1280 | 0.1064 | 0.5221 | 0.052* | |
| C24 | 0.0658 (2) | −0.1774 (11) | 0.5704 (4) | 0.0480 (14) | |
| H24 | 0.0438 | −0.2129 | 0.5022 | 0.058* | |
| C25 | 0.0486 (2) | −0.3157 (11) | 0.6579 (4) | 0.0479 (14) | |
| H25 | 0.0149 | −0.4481 | 0.6499 | 0.057* | |
| C26 | 0.0800 (2) | −0.2629 (11) | 0.7565 (4) | 0.0443 (14) | |
| H26 | 0.0681 | −0.3606 | 0.8164 | 0.053* | |
| C27 | 0.1284 (2) | −0.0708 (9) | 0.7696 (4) | 0.0356 (12) | |
| H27 | 0.1495 | −0.0341 | 0.8384 | 0.043* | |
| H1 | 0.232 (2) | 0.588 (9) | 0.950 (4) | 0.060 (15)* | |
| H2 | 0.268 (2) | 1.058 (10) | 0.933 (4) | 0.057 (15)* |
| O1 | 0.054 (2) | 0.0379 (19) | 0.038 (2) | −0.0100 (17) | 0.0135 (17) | −0.0039 (15) |
| O2 | 0.050 (2) | 0.0394 (19) | 0.044 (2) | −0.0075 (17) | 0.0069 (18) | −0.0001 (16) |
| O3 | 0.052 (2) | 0.0361 (17) | 0.026 (2) | −0.0051 (15) | 0.0106 (16) | 0.0026 (14) |
| N1 | 0.041 (2) | 0.027 (2) | 0.029 (2) | 0.0001 (18) | 0.012 (2) | −0.0011 (17) |
| C11 | 0.041 (3) | 0.033 (2) | 0.029 (3) | −0.005 (2) | 0.008 (2) | −0.001 (2) |
| C12 | 0.038 (3) | 0.030 (2) | 0.036 (3) | −0.007 (2) | 0.006 (2) | 0.004 (2) |
| C13 | 0.043 (3) | 0.045 (3) | 0.044 (4) | 0.000 (3) | 0.005 (3) | 0.005 (2) |
| C14 | 0.047 (3) | 0.064 (4) | 0.058 (4) | 0.003 (3) | −0.002 (3) | 0.019 (3) |
| C15 | 0.052 (4) | 0.048 (3) | 0.080 (5) | 0.004 (3) | 0.020 (4) | 0.016 (3) |
| C16 | 0.044 (3) | 0.054 (3) | 0.060 (4) | 0.004 (3) | 0.014 (3) | 0.006 (3) |
| C17 | 0.042 (3) | 0.043 (3) | 0.043 (3) | −0.002 (3) | 0.012 (3) | 0.004 (2) |
| C21 | 0.038 (3) | 0.031 (2) | 0.031 (3) | 0.004 (2) | 0.001 (2) | 0.001 (2) |
| C22 | 0.035 (3) | 0.034 (2) | 0.030 (3) | 0.004 (2) | 0.007 (2) | 0.000 (2) |
| C23 | 0.046 (3) | 0.047 (3) | 0.035 (3) | 0.000 (3) | 0.004 (3) | −0.003 (2) |
| C24 | 0.039 (3) | 0.056 (3) | 0.046 (4) | −0.005 (3) | −0.005 (3) | −0.007 (3) |
| C25 | 0.042 (3) | 0.051 (3) | 0.053 (4) | −0.008 (3) | 0.016 (3) | −0.013 (3) |
| C26 | 0.051 (3) | 0.042 (3) | 0.043 (3) | −0.002 (3) | 0.017 (3) | −0.005 (2) |
| C27 | 0.033 (3) | 0.038 (3) | 0.037 (3) | −0.001 (2) | 0.009 (2) | −0.004 (2) |
| O1—O2 | 1.467 (4) | C16—C17 | 1.375 (7) |
| O1—H1 | 1.05 (4) | C16—H16 | 0.9500 |
| O2—H2 | 1.06 (4) | C17—H17 | 0.9500 |
| O3—N1 | 1.325 (4) | C21—C22 | 1.454 (6) |
| N1—C21 | 1.297 (6) | C21—H21 | 0.9500 |
| N1—C11 | 1.475 (6) | C22—C23 | 1.390 (6) |
| C11—C12 | 1.498 (6) | C22—C27 | 1.393 (6) |
| C11—H112 | 0.9900 | C23—C24 | 1.388 (7) |
| C11—H111 | 0.9900 | C23—H23 | 0.9500 |
| C12—C17 | 1.388 (6) | C24—C25 | 1.378 (7) |
| C12—C13 | 1.392 (7) | C24—H24 | 0.9500 |
| C13—C14 | 1.388 (7) | C25—C26 | 1.371 (7) |
| C13—H13 | 0.9500 | C25—H25 | 0.9500 |
| C14—C15 | 1.389 (8) | C26—C27 | 1.368 (7) |
| C14—H14 | 0.9500 | C26—H26 | 0.9500 |
| C15—C16 | 1.368 (8) | C27—H27 | 0.9500 |
| C15—H15 | 0.9500 | ||
| O2—O1—H1 | 102 (3) | C17—C16—H16 | 120.6 |
| O1—O2—H2 | 97 (3) | C16—C17—C12 | 122.0 (5) |
| C21—N1—O3 | 124.2 (4) | C16—C17—H17 | 119.0 |
| C21—N1—C11 | 121.3 (4) | C12—C17—H17 | 119.0 |
| O3—N1—C11 | 114.4 (4) | N1—C21—C22 | 127.8 (4) |
| N1—C11—C12 | 110.1 (3) | N1—C21—H21 | 116.1 |
| N1—C11—H112 | 109.6 | C22—C21—H21 | 116.1 |
| C12—C11—H112 | 109.6 | C23—C22—C27 | 118.8 (4) |
| N1—C11—H111 | 109.6 | C23—C22—C21 | 115.4 (4) |
| C12—C11—H111 | 109.6 | C27—C22—C21 | 125.8 (5) |
| H112—C11—H111 | 108.1 | C24—C23—C22 | 120.3 (5) |
| C17—C12—C13 | 118.4 (5) | C24—C23—H23 | 119.8 |
| C17—C12—C11 | 120.8 (5) | C22—C23—H23 | 119.8 |
| C13—C12—C11 | 120.9 (4) | C25—C24—C23 | 119.6 (5) |
| C14—C13—C12 | 120.2 (5) | C25—C24—H24 | 120.2 |
| C14—C13—H13 | 119.9 | C23—C24—H24 | 120.2 |
| C12—C13—H13 | 119.9 | C26—C25—C24 | 120.2 (5) |
| C13—C14—C15 | 119.3 (6) | C26—C25—H25 | 119.9 |
| C13—C14—H14 | 120.3 | C24—C25—H25 | 119.9 |
| C15—C14—H14 | 120.3 | C27—C26—C25 | 120.6 (5) |
| C16—C15—C14 | 121.3 (6) | C27—C26—H26 | 119.7 |
| C16—C15—H15 | 119.4 | C25—C26—H26 | 119.7 |
| C14—C15—H15 | 119.4 | C26—C27—C22 | 120.4 (5) |
| C15—C16—C17 | 118.8 (5) | C26—C27—H27 | 119.8 |
| C15—C16—H16 | 120.6 | C22—C27—H27 | 119.8 |
| C21—N1—C11—C12 | −103.9 (5) | C11—N1—C21—C22 | 174.4 (4) |
| O3—N1—C11—C12 | 72.7 (4) | N1—C21—C22—C23 | 176.4 (4) |
| N1—C11—C12—C17 | 82.7 (5) | N1—C21—C22—C27 | −6.0 (7) |
| N1—C11—C12—C13 | −96.6 (5) | C27—C22—C23—C24 | 1.2 (7) |
| C17—C12—C13—C14 | −0.7 (7) | C21—C22—C23—C24 | 179.0 (4) |
| C11—C12—C13—C14 | 178.7 (4) | C22—C23—C24—C25 | −1.4 (7) |
| C12—C13—C14—C15 | 0.5 (7) | C23—C24—C25—C26 | 0.5 (7) |
| C13—C14—C15—C16 | −1.1 (8) | C24—C25—C26—C27 | 0.6 (7) |
| C14—C15—C16—C17 | 1.8 (8) | C25—C26—C27—C22 | −0.8 (7) |
| C15—C16—C17—C12 | −2.0 (7) | C23—C22—C27—C26 | −0.1 (7) |
| C13—C12—C17—C16 | 1.4 (7) | C21—C22—C27—C26 | −177.6 (4) |
| C11—C12—C17—C16 | −178.0 (4) | H1—O1—O2—H2 | 88 (4) |
| O3—N1—C21—C22 | −1.8 (7) |
| H··· | ||||
| O1—H1···O3 | 1.05 (5) | 1.66 (5) | 2.707 (5) | 174 (4) |
| O2—H2···O3i | 1.06 (5) | 1.64 (5) | 2.681 (5) | 166 (4) |
| C21—H21···O1ii | 0.95 | 2.46 | 3.304 (6) | 148 |
| C27—H27···O3 | 0.95 | 2.29 | 2.902 (6) | 121 |
| C11—H111···O1ii | 0.99 | 2.44 | 3.364 (7) | 155 |
| C11—H111···O2ii | 0.99 | 2.47 | 3.394 (7) | 155 |
| C11—H112···O2 | 0.99 | 2.52 | 3.407 (7) | 149 |