| Literature DB >> 29152099 |
Fang Yan1, Wenbo Wang2,3,4, Hui Ying2,3,4, Hongyu Li5, Jing Chen6, Chao Xu2,3,4.
Abstract
X-linked adrenoleukodystrophy (X-ALD) is the most common peroxisomal disorder. It is a heterogeneous disorder caused by mutations in the ATP-binding cassette protein subfamily D1 (ABCD1) gene, encoding the peroxisomal membrane protein ALDP, which is involved in the transmembrane transport of very long-chain fatty acids. For the first time, we report a case of olivopontocerebellar X-ALD on the Chinese mainland. In this study, a novel mutation (c.447T>A; p.S149R) in ABCD1 was detected in a patient diagnosed with X-ALD. The mutant amino acid is well conserved among species. Bioinformatics analysis predicted the substitution to be deleterious and to cause structural changes in the adrenoleukodystrophy protein. Immunofluorescence showed an altered subcellular localization of the S149R mutant protein, which may lead to defects in the degradation of very long chain fatty acids in peroxisomes. We therefore suggest that the novel mutation, which alters ALDP structure, subcellular distribution and function, is responsible for X-ALD.Entities:
Keywords: ABCD1 gene; X-linked adrenoleukodystrophy; bioinformatics analysis; genetic diagnosis; peroxisomal disorder
Year: 2017 PMID: 29152099 PMCID: PMC5675651 DOI: 10.18632/oncotarget.20974
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Laboratorial evaluation at diagnosis
| Test | Result | Change | Reference range | |
|---|---|---|---|---|
| Sex hormone | ACTH(pg/ml) | 211 | ↑ | 7.2-63.3 |
| Cortisol 8a.m.(nmol/L) | 470.9 | N | 171-536 | |
| FSH(mIU/ml) | 17.34 | N | ||
| LH(mIU/ml) | 34.1 | N | ||
| E2(pg/ml) | <5.00 | N | ||
| P(ng/ml) | 0.28 | N | ||
| Testosterone(ng/ml) | 1.36 | ↓ | 2.8-8.0 | |
| PRL(ng/ml) | 9.11 | N | 4.79-23.30 | |
| Dehydroepiandrosterone sulfate (umol/L) | 1.35 | ↓ | 4.34-12.2 | |
| SHBG(nmol/L) | 174.8 | ↑ | 14.5-48.4 | |
| FTI(%) | 2.7 | ↓ | 35.0-92.6 | |
| Lipids | LDL(mmol/L) | 3.52 | ↑ | 0.5-3.36 |
| HDL(mmol/L) | 1.06 | N | 0.8-1.5 | |
| TC(mmol/L) | 5.23 | N | 3.6-6.2 | |
| TG(mmol/L) | 1.28 | N | 0.4-1.8 | |
| ApoA(g/L) | 1.12 | N | 1.0-2.0 | |
| ApoB(g/L) | 0.94 | N | 0.6-1.1 | |
| ApoA/B | 1.19 | N | 1.0-2.0 | |
| Lpa(g/L) | 0.256 | N | 0-0.3 | |
| FFA(mmol/L) | 0.66 | N | 0.1-0.9 |
ACTH: adrenocorticotropic hormone; FSH: follicle-stimulating hormone; LH: luteinizing hormone; E2: estradiol; P: progestogen; PRL: prolactin; SHBG: sex hormone binding globulin; FTI: free testosterone index; LDL: low density lipoprotein; HDL: high density lipoprotein; TG: triglyceride; ApoA: apolipoprotein A; ApoB: apolipoprotein B; Lpa: lipoprotein a; FFA: free fatty acid; “↓”: decreased; “↑”: increased; N: normal range.
Figure 1Results of brain magnetic resonance imaging and abdominal computed tomography
(A-D) Brain MRI of the patient showing multiple patchy symmetrical subtle T2-weighted high-signal-intensity, T1-weighted low-signal-intensity and T2-FLAIR-high-signal-intensity lesions in the bilateral white matter around the lateral ventricle, posterior limbs of the internal capsule, and genu and splenium of the corpus callosum, brainstem and cerebellum. Mild enlargement of the bilateral third ventricle, fourth ventricle and lateral ventricle was observed. (E-F) Abdominal CT showing nodular hyperplasia in the bilateral adrenal glands and calcification in the left gland.
Figure 2Mutation analysis of ABCD1 gene
(A) Protein (ALDP) and gene (ABCD1): Genomic structure of the human ABCD1 gene. The gene consists of 10 exons (boxes) with the start codon in exon 1. Red letters in the gene indicate the position of the missense mutation, which is located in exon 1 of the ABCD1 gene. (B) Sequencing diagram of part of exon 1 in the ABCD1 gene. The arrow indicates the involved nucleotide change. The upper panel is the normal sequence, whereas the lower panel is the mutated sequence. (C) Schematic of the ALDP molecular structure. ALDP contains a TMD (amino acids 75-352) and a nucleotide-binding domain (NBD, also named the ATP-binding region, amino acids 474-700). The red X mark shows the position of the mutation S149R in exon 1 of the ABCD1 gene.
Protein alignment
| ABCD1(Homo sapiens) | Leu | Pro | Ala | Thr | Phe | Val | Asn | Ser | Ala | Ile | Arg | Tyr | Leu | Glu | Gly |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ABCD1(Pan troglodytes) | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| ABCD1(Mus musculus) | . | . | . | . | . | Ile | . | . | . | . | . | . | . | . | . |
| ABCD1(Rattusnorvegicus) | . | . | . | . | . | Ile | . | . | . | . | . | . | . | . | . |
| ABCD1(Oryctolaguscuniculus) | . | . | . | . | . | Ile | . | . | . | . | . | . | . | . | . |
| ABCD1(Susscrofadomesticus) | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| ABCD1(Macacamulatta) | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| ABCD1(Bos Taurus) | . | . | . | . | . | Ile | . | . | . | . | . | . | . | . | . |
| ABCD1(Caviaporcellus) | . | . | . | X | . | . | . | . | . | . | . | . | . | . | . |
| ABCD1(Feliscatus) | . | . | . | . | . | Ile | . | . | . | . | . | . | . | . | . |
| ABCD1(Canis lupus familiaris) | . | . | . | . | . | Ile | . | . | . | . | . | . | . | . | . |
| ABCD1(Equuscaballus) | . | . | . | . | . | Ile | . | . | . | . | . | . | . | . | . |
| ABCD1(Anoliscarolinensis) | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| ABCD2(Homo sapiens) | Ile | . | . | . | . | . | . | . | . | . | . | . | . | . | Cys |
| ABCD3(Homo sapiens) | Pro | Leu | Ile | Ser | Leu | . | . | Asn | Phe | Leu | Lys | . | Gly | Leu | Asn |
| ABCD4(Homo sapiens) | . | Asn | Ser | . | Leu | Lys | . | Phe | Asp | Gln | Phe | Thr | Cys | Asn | |
| ABCD1(The patient) | . | . | . | . | . | . | . | Arg | . | . | . | . | . | . | . |
Multiple protein alignment of the amino acid partial sequence from ALDP showing the highly conserved serine amino acid at position 149 (The position is marked in red).
Figure 3Bioinformatics analysis
(A) The prediction of the mutation effect by the PolyPhen software program showing a damaging effect of the p.S149R mutation (score: 1.000 with a prediction: probably damaging). (B) 3D-structure of ALDP: left: wild-type ALDP; middle: change of the ALDP structure with novel missense mutations: p.S149N in a previous study; right: p.S149R in the present study.
Figure 4Subcellular localization of ABCD1 in CHO cells
CHO cells were transfected with empty vector, pEGFP/ABCD1 (wild-type), or pEGFP/mutant-ABCD1 (p.S149R), and protein localization was observed by fluorescence microscopy. The ABCD3 proteins localized in the peroxisomes were detected using an anti-human ABCD3 antibody followed by secondary antibodies conjugated with Alexa Fluor 555 (red). The expressed ABCD1 proteins were detected as green fluorescent dots. The wild-type ABCD1 was localized to peroxisomes, but the mutant ABCD1 was diffuse in the cytosol. Original magnification: 600×.