T Shirouzu1, K Hosaka1, K-O Nam1, B S Weir2, P R Johnston2, T Hosoya1. 1. Department of Botany, National Museum of Nature and Science, Amakubo 4-1-1, Tsukuba, Ibaraki 305-0005, Japan. 2. Landcare Research, Private Bag 92170, Auckland, New Zealand.
Abstract
Dacrymycetes, sister to Agaricomycetes, is a noteworthy lineage for studying the evolution of wood-decaying basidiomycetes; however, its species diversity and phylogeny are largely unknown. Species of Dacrymycetes previously used in molecular phylogenetic analyses are mainly derived from the Northern Hemisphere, thus insufficient knowledge exists concerning the Southern Hemisphere lineages. In this study, we investigated the species diversity of Dacrymycetes in New Zealand. We found 11 previously described species, and eight new species which were described here: Calocera pedicellata, Dacrymyces longistipitatus, D. pachysporus, D. stenosporus, D. parastenosporus, D. cylindricus, D. citrinus, and D. cyrtosporus. These eight newly described species and seven of the known ones, namely, Calocera fusca, C. cf. guepinioides, C. lutea, Dacrymyces flabelliformis, D. intermedius, D. subantarcticensis, and Heterotextus miltinus, have rarely or never been recorded from the Northern Hemisphere. In a molecular-based phylogeny, these New Zealand strains were scattered throughout the Dacrymycetaceae clade. Sequences obtained from specimens morphologically matching C. guepinioides were separated into three distant clades. Because no obvious morphological differences could be discerned between the specimens in each clade and no sequence exists from the type specimen, a C. guepinioides s.str. clade could not be determined. This survey of dacrymycetous species in the Southern Hemisphere has increased taxon sampling for phylogenetic analyses that can serve as a basis for the construction of a stable classification of Dacrymycetes.
Dacrymycetes, sister to Agaricomycetes, is a noteworthy lineage for studying the evolution of wood-decaying basidiomycetes; however, its species diversity and phylogeny are largely unknown. Species of Dacrymycetes previously used in molecular phylogenetic analyses are mainly derived from the Northern Hemisphere, thus insufficient knowledge exists concerning the Southern Hemisphere lineages. In this study, we investigated the species diversity of Dacrymycetes in New Zealand. We found 11 previously described species, and eight new species which were described here: Calocera pedicellata, Dacrymyces longistipitatus, D. pachysporus, D. stenosporus, D. parastenosporus, D. cylindricus, D. citrinus, and D. cyrtosporus. These eight newly described species and seven of the known ones, namely, Calocera fusca, C. cf. guepinioides, C. lutea, Dacrymyces flabelliformis, D. intermedius, D. subantarcticensis, and Heterotextus miltinus, have rarely or never been recorded from the Northern Hemisphere. In a molecular-based phylogeny, these New Zealand strains were scattered throughout the Dacrymycetaceae clade. Sequences obtained from specimens morphologically matching C. guepinioides were separated into three distant clades. Because no obvious morphological differences could be discerned between the specimens in each clade and no sequence exists from the type specimen, a C. guepinioides s.str. clade could not be determined. This survey of dacrymycetous species in the Southern Hemisphere has increased taxon sampling for phylogenetic analyses that can serve as a basis for the construction of a stable classification of Dacrymycetes.
Entities:
Keywords:
Dacrymycetes; New Zealand; Southern Hemisphere; phylogeny; taxonomy
Dacrymycetes, one of the early-diverging wood decomposers in Basidiomycota, is sister to Agaricomycetes. Although consequently a noteworthy lineage for studying the evolution of wood-decaying basidiomycetes, its species diversity and phylogeny remain poorly understood. Morphology-based classifications of dacrymycetous species from the 1960s and 1970s (McNabb 1964, 1965a, 1965b, 1965c, 1965d, 1965e, 1966, 1973, Lowy 1971, Reid 1974) are only recently beginning to be reassessed using DNA-based phylogenies. To date, the species used for molecular phylogenetic analyses have been mainly collected from the Northern Hemisphere (Weiß & Oberwinkler 2001, Shirouzu et al. 2007, 2009, 2013a); consequently, insufficient knowledge exists about the phylogenetic relationships of the Southern Hemisphere Dacrymycetes. The major host trees of dacrymycetous species in the Northern Hemisphere belong to Pinaceae and Fagaceae, whereas forests in the Southern Hemisphere are characterised by families such as Nothofagaceae, Myrtaceae, Podocarpaceae, and Araucariaceae. Conifers in the Southern Hemisphere have different evolutionary histories than those in the Northern Hemisphere (Leslie et al. 2012). In some Agaricomycetes mushrooms, distributed species or lineages are different between the hemispheres (e.g. Coetzee et al. 2001, Hosaka et al. 2008). Because of the dissimilarities of host trees and geographical background, Dacrymycetes distributed in the Southern Hemisphere are predicted to include phylogenetically different lineages from those in the Northern Hemisphere.The species diversity of Dacrymycetes from the Southern Hemisphere has been described in taxonomic studies by McNabb (McNabb 1964, 1965a, 1965b, 1965c, 1965d, 1965e, 1966, 1973) and Lowy (1971). Nevertheless, many dacrymycetous species from the Southern Hemisphere have not been included in any molecular phylogenetic analysis and samples have not been preserved for DNA extraction. Because it tends to degrade with time (e.g. Erkens et al. 2008, Hosaka & Uno 2013), DNA is difficult to obtain from specimens collected more than 50 years ago, therefore field collection of fresh material is needed. The acquisition of newly collected specimens from the Southern Hemisphere will help remove the current geographic bias in taxon sampling and will likely improve our understanding of phylogenetic relationships within Dacrymycetes.In this study, field expeditions were conducted in New Zealand to collect dacrymycetous fruiting bodies as an initial step in the investigation of Dacrymycetes species in the Southern Hemisphere. We then conducted a molecular phylogenetic analysis and taxonomic classification of New Zealand Dacrymycetes and compared species compositions between Southern and Northern Hemispheres.
MATERIALS AND METHODS
Fruiting body collection and identification
From 2011 to 2015, fruiting bodies of Dacrymycetes were collected at 74 sites in the North and South Islands of New Zealand. For species identification, collected specimens were morphologically examined with a stereomicroscope and a light microscope (Shirouzu et al. 2009). Genus- and species-level identifications were conducted according to a classification system based on morphological characteristics (Olive 1958, McNabb 1965a, d, 1973, Lowy 1971, McNabb & Talbot 1973, Reid 1974, Oberwinkler 1993, 2014, Shirouzu et al. 2009). Although some genera based on these criteria are not monophyletic (Shirouzu et al. 2013a), we retained those generic concepts because no phylogenetic-based classification system has yet been established for Dacrymycetes. In similar situations, new species have been described according to the traditional system based on morphological criteria (Shirouzu et al. 2009, 2013b, Wu et al. 2011, Delivorias et al. 2012).Fruiting bodies were dried with a food dehydrator (58 °C for 12 h) and deposited in the Fungal and Plant Disease Collection (PDD) in New Zealand and the National Museum of Nature and Science (TNS) in Japan. Pure cultures were isolated from fresh fruiting bodies by multi-basidiospore isolation on 2.5 % malt agar (MA; Nissui, Tokyo, Japan) plates and preserved in sealed vials containing cornmeal agar (0.2 % CMA, Nissui) + MA medium (0.2 % CMA (8.5 g), 2.5 % MA (22.5 g), 1 g yeast extract, and 1 L distilled water). The isolated cultures were deposited in the International Collection of Micro-organisms from Plants (ICMP) in New Zealand (Table 1).
Table 1
Specimen, culture, and sequence accession numbers and localities of samples used in molecular phylogenetic analyses.
Name
Locality
Specimen no.1
Culture no.2
DDBJ accession no.
LSU
ITS
Calocera arborea
Brazil
INPA 241458 (holotype)
–
AB723514
–
Brazil
INPA 241457
–
AB723513
–
Calocera bambusicola
Taiwan
Wu 9910-12
–
–
FJ195751
Calocera cornea
New Zealand
PDD 104991
ICMP 20465
LC131362
LC131403
New Zealand
PDD 107847
ICMP 21223
LC131363
LC131404
Japan
TNS-F-21061
MAFF 241186
AB472722
–
Japan
TNS-F-21065
MAFF 241188
AB472725
–
USA
–
CBS 125.84
AB472739
–
Canada
–
CBS 124.84
AB472738
AB712437
Calocera fusca
New Zealand
PDD 107930
–
LC131364
LC131405
New Zealand
PDD 107972
ICMP 21238
LC131365
LC131406
Calocera glossoides (= Dacryomitra pusilla)
Germany
FO38346
–
AJ406406
–
Calocera cf. guepinioides
New Zealand
PDD 105005
ICMP 20480
LC131366
LC131407
New Zealand
PDD 105033
ICMP 20502
LC131367
LC131408
New Zealand
PDD 107874
ICMP 21226
LC131368
LC131409
New Zealand
PDD 107929
ICMP 21231
LC131369
LC131410
New Zealand
PDD 107969
ICMP 21236
LC131370
LC131411
New Zealand
PDD 107981
ICMP 21240
LC131371
LC131412
Calocera lutea
New Zealand
PDD 107841
ICMP 21221
LC131372
LC131413
New Zealand
PDD 107842
ICMP 21222
LC131373
LC131414
Australia
–
CBS 291.82
AB712379
AB712438
Calocera pedicellata
New Zealand
PDD 107830
–
LC131374
LC131415
New Zealand
PDD 107925 (holotype)
ICMP 21230
LC131375
LC131416
Calocera sinensis
Taiwan
Wu 0703-6
–
–
FJ195754
Taiwan
JCH 070726
–
–
FJ195755
Calocera viscosa
Japan
TNS-F-15704
MAFF 240119
AB299048
AB712439
Canada
–
CBS 292.82
AB472740
–
Cerinomyces albosporus
Japan
TNS-F-15706
MAFF 240121
AB299050
AB712440
Cerinomyces canadensis
Japan
TNS-F-21034
MAFF 241162
AB472696
AB712441
Japan
TNS-F-21035
MAFF 241163
AB472697
–
Cerinomyces ceraceus
USA
–
HHB-8969
AB712422
AB712442
Cerinomyces crustulinus
Canada
–
TUFC 30545
AB712423
AB712443
Taiwan
–
–
AY600248
–
Cerinomyces grandinioides
USA
–
HHB-6908
AB712424
AB712444
Cerinomyces lagerheimii
USA
–
RLG-13487
AB712425
AB712445
Cerinomyces pallidus
Japan
TNS-F-21064
–
AB472724
–
Belize
–
FP150848
AB712426
AB712446
Dacrymyces adpressus
Japan
TNS-F-21045
MAFF 241172
AB472707
AB712447
Japan
TNS-F-21069
MAFF 241191
AB472729
–
Dacrymyces ancyleus
Japan
TNS-F-21051 (holotype)
MAFF 241177
AB472713
AB712448
Dacrymyces aureosporus
Japan
TNS-F-15711
MAFF 240126
AB299057
AB712449
Japan
TNS-F-21074
MAFF 241195
AB472734
–
Dacrymyces capitatus
Japan
TNS-F-15709
MAFF 240124
AB299055
–
Japan
TNS-F-21062
MAFF 241187
AB472723
–
Canada
–
CBS 293.82
AB472741
AB712450
Dacrymyces chrysocomus
UK
–
CBS 280.84
AB712427
AB712451
Dacrymyces chrysospermus
Japan
TNS-F-15712
MAFF 240127
AB299073
AB712452
Japan
TNS-F-21060
MAFF 241185
AB472721
–
Dacrymyces citrinus
New Zealand
PDD 107915 (holotype)
ICMP 21227
LC131376
LC131417
New Zealand
PDD 107979
ICMP 21239
LC131377
LC131418
Dacrymyces cylindricus
New Zealand
PDD 105052 (holotype)
ICMP 20517
LC131378
LC131419
New Zealand
PDD 107989
–
LC131379
LC131420
Dacrymyces cyrtosporus
New Zealand
PDD 107952
–
LC131380
LC131421
New Zealand
PDD 107980 (holotype)
–
LC131381
LC131422
Dacrymyces dendrocalami
Japan
TNS-F-38903
TUFC 13914
AB712428
AB712453
Dacrymyces dictyosporus
USA
–
HHB-8618
AB712429
AB712454
Dacrymyces flabelliformis
New Zealand
PDD 107863
ICMP 21225
LC131382
LC131423
New Zealand
PDD 107944
ICMP 21233
LC131383
LC131424
New Zealand
PDD 76696 (holotype)
HHB-18308
AB712430
AB712455
Dacrymyces intermedius
New Zealand
PDD 107851
ICMP 21224
LC131384
–
New Zealand
PDD 107939
ICMP 21232
LC131385
–
Dacrymyces lacrymalis
Japan
TNS-F-15719
MAFF 240134
AB299069
AB712456
Japan
TNS-F-21040
MAFF 241167
AB472702
–
Japan
TNS-F-21042
MAFF 241169
AB472704
–
Dacrymyces longistipitatus
New Zealand
PDD 107996
ICMP 21241
LC131386
LC131425
New Zealand
PDD 107997 (holotype)
ICMP 21242
LC131387
LC131426
Dacrymyces cf. microsporus
New Zealand
PDD 104992
ICMP 20466
LC131388
–
New Zealand
PDD 104993
ICMP 20467
LC131389
–
Dacrymyces microsporus
Japan
TNS-F-21049
MAFF 241175
AB472711
–
Japan
TNS-F-21050
MAFF 241176
AB472712
AB712457
Dacrymyces minor
Japan
TNS-F-15720
MAFF 240135
AB299059
–
Japan
TNS-F-15721
MAFF 240136
AB299063
AB712458
Dacrymyces minutus
Japan
TNS-F-15722
MAFF 240137
AB299070
–
Japan
TNS-F-21073
–
AB472733
AB712459
Dacrymyces novae-zelandiae
New Zealand
PDD 107892
–
LC131390
LC131427
New Zealand
PDD 107953
ICMP 21235
LC131391
LC131428
Japan
TNS-F-21038
MAFF 241165
AB472700
AB712460
New Zealand
–
CBS 295.82
AB472742
–
Dacrymyces pachysporus
New Zealand
PDD 105004 (holotype)
ICMP 20479
LC131392
LC131429
New Zealand
PDD 107916
ICMP 21228
LC131393
LC131430
Dacrymyces parastenosporus
New Zealand
PDD 104960
ICMP 20433
LC131394
LC131431
New Zealand
PDD 104963 (holotype)
ICMP 20436
LC131395
LC131432
Dacrymyces pinacearum
Japan
TNS-F-21056 (holotype)
MAFF 241182
AB472718
AB712461
Dacrymyces punctiformis
Japan
TNS-F-15723
MAFF 240138
AB299052
AB712462
Japan
TNS-F-15725
MAFF 240140
AB299071
–
Dacrymyces san-augustinii
Japan
TNS-F-15726
MAFF 240141
AB299081
AB712463
Japan
TNS-F-21075
MAFF 241196
AB472735
–
Dacrymyces stenosporus
New Zealand
PDD 105018 (holotype)
>ICMP 20488
LC131396
LC131433
New Zealand
PDD 107970
ICMP 21237
LC131397
LC131434
Dacrymyces cf. stillatus
New Zealand
PDD 105038
ICMP 20505
LC131398
–
Dacrymyces stillatus
Japan
TNS-F-15727
MAFF 240142
AB299061
AB712464
Japan
TNS-F-21052
MAFF 241178
AB472714
–
Germany
FO28136
–
AF291309
–
Dacrymyces subalpinus
Japan
TNS-F-15730
MAFF 240145
AB299060
AB712465
Japan
TNS-F-21071
MAFF 241193
AB472731
–
Dacrymyces subantarcticensis
New Zealand
PDD 107948
ICMP 21234
LC131399
LC131435
New Zealand
PDD 107988
–
LC131400
LC131436
New Zealand
PDD 76679 (holotype)
HHB-18220
AB712431
AB712466
Dacrymyces subarcticus
Japan
TNS-F-21067 (holotype)
–
AB472727
AB712467
Japan
TNS-F-21076
–
AB472736
–
Dacrymyces variisporus
Japan
TNS-F-15732
MAFF 240147
AB299067
AB712470
Japan
TNS-F-15733
MAFF 240148
AB299072
–
Dacryopinax elegans
USA
–
HHB-18731
AB712433
AB712471
Dacryopinax indacocheae
Venezuela
–
CRM-72
AB712434
AB712472
Dacryopinax spathularia
Japan
TNS-F-15736
MAFF 240151
AB299079
–
Japan
TNS-F-21048
MAFF 241174
AB472710
AB712473
Dacryopinax sphenocarpa
Japan
TNS-F-21046 (holotype)
MAFF 241173
AB472708
AB712474
Japan
TNS-F-21066
MAFF 241189
AB472726
–
Dacryoscyphus chrysochilus
China
KUN F45014 (holotype)
–
AY604567
–
Ditiola haasii
Germany
RoKi100
–
AF291314
–
Femsjonia peziziformis
Japan
TNS-F-15737
MAFF 240152
AB299080
AB712476
Germany
FO25100
–
AF291330
–
Guepiniopsis buccina
Japan
TNS-F-15738
MAFF 240153
AB299085
AB712477
USA
AFTOL-ID 888
–
AY745711
DQ206986
Heterotextus miltinus
New Zealand
PDD 104962
ICMP 20435
LC131401
LC131437
New Zealand
PDD 107924
ICMP 21229
LC131402
LC131438
New Zealand
–
ICMP 16702
AB712436
AB712478
Unilacryma unispora
Japan
TNS-F-15731
MAFF 240146
AB299074
AB712468
Japan
TNS-F-38904
–
AB712432
AB712469
Coprinus comatus
USA
AFTOL-ID 626
–
AY635772
AY854066
Suillus pictus
USA
AFTOL-ID 717
–
AY684154
AY854069
Newly described species as well as specimens, cultures, and sequences obtained in this study are shown in bold.
1 PDD, Fungal and Plant Disease Collection (New Zealand).
2 ICMP, International Collection of Micro-organisms from Plants (New Zealand).
DNA sequencing and phylogenetic analysis
Fresh tissues of fruiting bodies were soaked at 4 °C in DMSO buffer (Seutin et al. 1991) containing 100 mM Tris-HCl (pH 8.0) and 0.1 M sodium sulphate (Na2SO3) until extraction. Soaked tissue samples were then ground in liquid nitrogen using a mortar and pestle. After grinding, samples were immediately transferred to 1.5 mL tubes along with 1 000 μL of 2× CTAB buffer (Doyle & Doyle 1987) followed by the addition of 0.1 M Na2SO3. Samples were incubated at 65 °C for 1 h and then centrifuged at 13 500 ×g for 5 min. The aqueous phase was transferred to a new tube and the precipitated tissue debris was discarded. After the addition of an equal volume of chloroform : isoamyl alcohol (24 : 1) and vigorous mixing for 2 min, the mixture was centrifuged at 13 500 ×g for 15 min. Using a pipette, the aqueous phase was transferred to a new tube. To c. 300 μL of the aqueous phase, 1 000 μL of 6 M sodium iodine buffer (6 M NaI, 50 mM Tris-HCl (pH 7.4), 10 mM EDTA, and 0.1 M Na2SO3) was added and mixed gently for 1 min. Twenty-five microlitres of a silica mixture prepared following the protocol of Rogstad (2003) was added to the samples. Samples were incubated at 55 °C for 1 h and then centrifuged at 13 500 ×g for c. 10 s. The supernatant was discarded and 750 μL of wash buffer (10 μL Tris-HCl (pH 7.4), 1 mM EDTA, 100 mM NaCl, and 50 % EtOH) was added and mixed briefly, followed by centrifugation at full speed for c. 5 s. This washing step was repeated twice. After washing, the samples were centrifuged at 13 500 ×g for 10 s; the remaining wash buffer was removed by pipetting, and the precipitated silica was dried at room temperature for 30 min to 1 h. Final elution was performed by adding 100 μL of ultrapure water with brief mixing, followed by incubation at 65 °C for 15 min. Samples were centrifuged at 13 500 ×g for 1 min. The supernatant layer was then transferred to a new tube and stored at -20 °C until PCR was performed.DNA sequence data were obtained from large subunit (LSU) and internal transcribed spacer (ITS1-5.8S-ITS2, ITS) regions of nuclear rRNA. The primer combinations LR0R/LR5 (Vilgalys & Hester 1990) and ITS5/ITS4 (White et al. 1990) were used. PCR amplifications were carried out in 20 μL reaction volumes containing 1 μL genomic DNA, 1 μL dNTPs (4 mM), 1 μL of each primer (8 mM), 0.5 units of Taq polymerase (Takara, Kusatsu, Japan), 2 μL MgCl2 (25 mM), and 2 μL bovine serum albumin (10 mg/mL). Cycling parameters were 94 °C for 3 min, followed by 30 cycles of 94 °C for 1 min, 51 °C for 30 s, and 72 °C for 1 min, with a final extension at 72 °C for 15 min. PCR products were purified with ExoSAP-IT (Affymetrix, Santa Clara, CA, USA) and directly sequenced using a Big Dye Terminator Cycle Sequencing kit (Applied Biosystems, Norwalk, CT, USA) following the manufacturer’s instructions. The primers used for cycle sequencing were LR0R and LR5 (Vilgalys & Hester 1990) and ITS1 and ITS4 (White et al. 1990). The sequences determined in this study were deposited in the DNA Data Bank of Japan (DDBJ; Table 1).Multiple sequence alignment of a combined dataset comprising the sequences obtained in this study and available sequences of Dacrymycetes and Agaricomycetes species downloaded from DDBJ was carried out with MAFFT v. 7 (mafft.cbrc.jp/ alignment/software; Katoh & Standley 2013). Poorly aligned sequence regions were removed prior to subsequent analysis. Molecular phylogenetic analysis of LSU and ITS sequences was performed in RAxML v. 8.1.15 (Stamatakis 2014) under a GTR+Γ model. The dataset was partitioned to allow different parameters for each gene region (LSU, ITS1, 5.8S, and ITS2). Maximum likelihood bootstrap percentages and the tree were obtained by simultaneously running rapid bootstrap analyses of 1 000 pseudoreplicates followed by a search for the most likely tree. The aligned dataset was uploaded to TreeBASE under ID S19007 (http://purl.org/phylo/treebase/phylows/study/TB2:S19007).
RESULTS
As a result of field collections, 441 specimens of fruiting bodies were obtained and 281 cultures were isolated. Immature or overmature fruiting bodies were omitted from subsequent observations and the molecular analysis.Using the sequences obtained from collected samples and downloaded from DDBJ (Table 1), a phylogenetic tree was estimated in RAxML (Fig. 1). A total of 524 (LSU) and 824 (ITS) characters (including gaps) were used for the phylogenetic analysis.
Fig. 1
Phylogenetic tree of Dacrymycetes estimated in RAxML using concatenated LSU and ITS sequences. Maximum likelihood bootstrap percentages ≥ 50 % are shown above or below branches, with bolded branches indicating ≥ 80 % support. Newly described species and collected samples in this study are shown in bold. Southern Hemisphere strains are highlighted in grey. Asterisks denote clades comprising only New Zealand species. TreeBASE ID: S19007.
Sequences of the New Zealand samples obtained in this study were widely distributed within the Dacrymycetaceae clade, but were not found in Cerinomycetaceae and Unilacrymales clades (Fig. 1).As described below, eight new and 11 known species were identified on the basis of morphological observations and the molecular phylogenetic analysis.
TAXONOMY
New species
Shirouzu, sp. nov. —MycoBank MB817692; Fig. 2a, 3
Fig. 2
Basidiocarps. a. Calocera pedicellata PDD 107925; b. Dacrymyces longistipitatus PDD 107997; c. Dacrymyces pachysporus PDD 107916; d. Dacrymyces stenosporus PDD 107970; e. Dacrymyces parastenosporus PDD 104963; f. Dacrymyces cylindricus PDD 105052; g. Dacrymyces citrinus PDD 107915; h. Dacrymyces cyrtosporus PDD 107980. — Scale bars = 5 mm.
Fig. 3
Calocera pedicellata PDD 107925. a. Basidiocarps; b. diagram showing longitudinal section of basidiocarp (solid lines: central core of compact parallel hyphae; dashed line: hymenium; dotted line: sterile marginal part); c. basidiospores; d. marginal hyphae; e. probasidium; f. basidium.
Differs from Calocera cornea by the basidiocarps consistently having stipes and by the presence of irregularly shaped terminal cells on the sterile surfaces.Etymology. From the Latin ‘pedicellatus’ = pedicellate, referring to the stipitate basidiocarps.Type. NEW ZEALAND, South Island, Denniston, Coalbrookdale Walk, on dead branches of a woody plant, 27 May 2015, T. Shirouzu (holotype PDD 107925; isotype TNS-F-65489, culture ex-type ICMP 21230).DNA sequences from the holotype — LC131375 (LSU), LC131416 (ITS).Basidiocarps scattered, cylindrical, subulate, sometimes palmate, simple or branched, stipitate-pileate, bearing cylindrical or subulate, sometimes rugose pilei, pale yellow to orange, soft-cartilaginous, 1–6 mm high, 0.5–1 mm diam, in transverse section through the pileus showing an organization into three zones, i.e. a central core of compact parallel hyphae surrounded by a zone of loosely interwoven hyphae enclosed by a hymenium. Internal hyphae branched, septate, thin- or thick-walled, hyaline, 2–5 μm diam, without clamp connections. Marginal hyphae on sterile surfaces of basidiocarps cylindrical, straight or flexuous, septate, hyaline, with irregularly shaped thin-walled terminal cells of 10–30 × 2–3 μm. Hymenium limited to the surface of the pileus, amphigenous, composed of basidia and simple cylindrical dikaryophyses. Probasidia cylindrical to clavate, pale yellow, 25–40 × 4–6 μm, without basal clamp connections, becoming bifurcate. Basidiospores cylindrical to reniform, straight or curved, with an apiculum at the base, thin-walled, hyaline, 9–12 × 4–6 μm (10.5 × 5 μm on average, n = 10), l/w 1.8–2.5 (2.1 on average), 0–1-septate.Specimens examined. NEW ZEALAND, North Island, Tararua Forest Park, Kiriwhakapapa Road, on dead branches of a woody plant, 6 June 2015, T. Shirouzu, PDD 107959, culture ICMP 21246; South Island, Catlins Forest Park, Catlins River Track, on dead branches of Pinus radiata, 3 May 2015, T. Shirouzu, PDD 107830 (TNS-F-65488); Lake Brunner, Ara O Te Kinga, on dead branches of a woody plant, 18 May 2015, T. Shirouzu, PDD 107890, culture ICMP 21243.Notes — Calocera pedicellata is characterised by cylindrical stipitate-pileate basidiocarps, irregularly shaped terminal cells, and small 1-septate basidiospores. This species is assigned to the genus Calocera on the basis of the presence of cylindrical basidiocarps, three-zoned internal structures, and amphigenous hymenia. The most similar species to C. pedicellata is C. cornea. These two species share the characteristics of small cylindrical basidiocarps, hyphae without clamp connections, and small 0–1-septate basidiospores (McNabb 1965a). Calocera pedicellata is distinguished from C. cornea on the basis of the characteristics of the basidiocarps consistently having stipes and by irregularly shaped terminal cells on the sterile surfaces. Calocera pedicellata is phylogenetically distant from the samples accepted here as C. cornea (Fig. 1).Shirouzu, sp. nov. — MycoBank MB817693; Fig. 2b, 4
Fig. 4
Dacrymyces longistipitatus PDD 107997. a. Basidiocarps; b. diagram showing longitudinal section of basidiocarp (dashed line: hymenium; dotted line: sterile marginal part); c. basidiospores; d. marginal hyphae; e. probasidium; f. developing basidium.
Differs from Dacrymyces capitatus by the basidiocarps having longer stipes and by its thicker-walled basidiospores.Etymology. From the Latin ‘longus’ = long and ‘stipitatus’ = stipitate, referring to the basidiocarps with long stipes.Type. NEW ZEALAND, North Island, Coromandel Forest Park, Rangihau Track, on dead branches of a broad-leaved tree, 22 June 2015, T. Shirouzu (holotype PDD 107997; isotype TNS-F-65501, culture ex-type ICMP 21242).DNA sequences from the holotype — LC131387 (LSU), LC131426 (ITS).Basidiocarps scattered, cylindrical to turbinate, simple, stipitate-pileate, bearing a cylindrical to subglobose, sometimes discoid pileus, pale yellow to pale olive, firm-gelatinous to soft-cartilaginous, 2–6 mm high, 1–3 mm diam. Internal hyphae branched, septate, thin-walled, hyaline, 2–4 μm diam, without clamp connections. Marginal hyphae on sterile surfaces of basidiocarps cylindrical, straight or flexuous, septate, hyaline, with irregularly shaped thin- or slightly thick-walled terminal cells of 20–30 × 3–4 μm. Hymenium limited to the surface of the pileus, amphigenous, composed of basidia. Probasidia cylindrical to clavate, pale yellow, 30–40 × 3–4 μm, without basal clamp connections, becoming bifurcate. Basidiospores cylindrical to reniform, curved, with an apiculum at the base, thick-walled, hyaline to pale yellow, 12–15 × 4–5 μm (14 × 4.5 μm on average, n = 10), l/w 2.4–3.8 (3 on average), 0–3-septate.Specimens examined. NEW ZEALAND, North Island, Coromandel Forest Park, Rangihau Track, on dead branches of a woody plant, 22 June 2015, T. Shirouzu, PDD 107996 (TNS-F-65500), culture ICMP 21241; Whenuakite Block, on dead branches of a conifer, 22 June 2015, T. Shirouzu, PDD 107995; South Island, Westland Tai Poutini National Park, Fox Glacier, on dead branches of a woody plant, 16 May 2015, T. Shirouzu, PDD 107885; Lake Brunner, Ara O Te Kinga, on dead branches of a woody plant, 18 May 2015, T. Shirouzu, PDD 107889.Notes — Dacrymyces longistipitatus is characterised by cylindrical to turbinate stipitate-pileate basidiocarps, irregularly shaped slightly thick-walled terminal cells, and thick-walled 3-septate basidiospores. This species is similar to D. capitatus and D. dacryomitriformis in having stipitate-pileate basidiocarps, hyphae lacking clamp connections, and 3-septate basidiospores. Compared with D. longistipitatus, D. capitatus has shorter-stiped basidiocarps and thinner-walled basidiospores (McNabb 1973). Dacrymyces longistipitatus is phylogenetically distant from specimens accepted here as D. capitatus (Fig. 1). In contrast to D. longistipitatus, D. dacryomitriformis has simple or sparingly branched dikaryophyses, relatively long probasidia (35–60 × 3.5–5 μm), and thin-walled basidiospores with thick septa (McNabb 1973).Shirouzu, sp. nov. — MycoBank MB817694; Fig. 2c, 5
Fig. 5
Dacrymyces pachysporus PDD 105004. a. Basidiocarps; b. diagram showing longitudinal section of basidiocarp (dashed line: hymenium; dotted line: sterile marginal part); c. basidiospores; d. marginal hyphae; e. probasidium; f. developing basidium and dikaryophysis.
Differs from Dacrymyces sichuanensis by the presence of longer basidiospores and the absence of branched dikaryophyses.Etymology. From the Greek ‘pachy’ = thick and ‘sporus’ = spore, referring to the thick-walled basidiospores.Type. NEW ZEALAND, South Island, Nelson Lakes National Park, Lake Lotoiti, on dead branches of Leptospermum sp. or Kunzea sp., 8 May 2014, T. Shirouzu (holotype PDD 105004; isotype TNS-F-65506, culture ex-type ICMP 20479).DNA sequences from the holotype — LC131392 (LSU), LC131429 (ITS).Basidiocarps scattered or gregarious, sometimes coalesced, pustulate to pulvinate, sessile, orange, firm-gelatinous, 0.5–1 mm high, 0.5–2 mm diam. Internal hyphae branched, septate, thin-walled, hyaline, 2–3 μm diam, with clamp connections. Marginal hyphae on sterile surfaces of basidiocarps cylindrical, straight or flexuous, septate, hyaline, with irregularly shaped thin-walled terminal cells of 30–45 × 3–5 μm. Hymenium limited to the ventral surface of the basidiocarp, amphigenous, composed of basidia and simple cylindrical dikaryophyses. Probasidia cylindrical to clavate, pale yellow, 35–55 × 5 μm, with basal clamp connections, becoming bifurcate. Basidiospores cylindrical to reniform, straight or curved, with an apiculum at the base, thick-walled, hyaline to pale yellow, 16–19 × 6–7 μm (17 × 6 μm on average, n = 10), l/w 2.3–3.2 (2.8 on average), 0–3-septate.Specimens examined. NEW ZEALAND, South Island, Victoria Forest Park, Mt Haast Route, on dead branches of a woody plant, 22 May 2015, T. Shirouzu, PDD 107916 (TNS-F-65507), culture ICMP 21228.Notes — Dacrymyces pachysporus is characterised by its small pustulate to pulvinate basidiocarps, hyphae with clamp connections, and long thick-walled 0–3-septate basidiospores. This species is similar to D. sichuanensis and D. stillatus in having small pustulate to pulvinate sessile basidiocarps and 0–3-septate thick-walled basidiospores. Dacrymyces sichuanensis has shorter basidiospores (12.5–15.6 × 4.5–6.5 μm, Liu & Fan 1990) and branched dikaryophyses, the latter discerned based on a line drawing in Liu & Fan (1990). Dacrymyces stillatus has no clamp connections on hyphae (McNabb 1973, Shirouzu et al. 2009). Dacrymyces pachysporus is also similar to D. punctiformis in having small pustulate to pulvinate sessile basidiocarps and clamp connections on hyphae, but D. punctiformis has thin-walled smaller basidiospores (10–15 × 3.5–5 μm, as Dacrymyces tortus, McNabb 1973; 7–13 × 4–6 μm, Shirouzu et al. 2009). Samples accepted here as D. punctiformis and D. stillatus are phylogenetically distant from D. pachysporus (Fig. 1).Shirouzu, sp. nov. — MycoBank MB817695; Fig. 2d, 6
Fig. 6
Dacrymyces stenosporus PDD 105018. a. Basidiocarps; b. diagram showing longitudinal section of basidiocarp (dashed line: hymenium; dotted line: sterile marginal part); c. basidiospores; d. marginal hyphae; e probasidium; f. developing basidium.
Differs from Dacrymyces lacrymalis by its longer basidiospores.Etymology. From the Greek ‘stenos’ = narrow and ‘sporus’ = spore, referring to the slender basidiospores.Type. NEW ZEALAND, South Island, Nelson Lakes National Park, Lake Rotoroa, on dead branches of Coprosma robusta, 9 May 2014, T. Shirouzu (holotype PDD 105018; isotype TNS-F-65510, culture ex-type ICMP 20488).DNA sequences from the holotype — LC131396 (LSU), LC131433 (ITS).Basidiocarps scattered or gregarious, sometimes coalesced, pulvinate to irregularly discoid, sometimes gyrose, sessile, pale to orange yellow, firm-gelatinous, 1–2 mm high, 1–5 mm diam. Internal hyphae branched, septate, thin-walled, hyaline, 2–3 μm diam, without clamp connections. Marginal hyphae on sterile surfaces of basidiocarps cylindrical, straight or flexuous, septate, hyaline, with cylindrical thin-walled terminal cells of 20–30 × 2–3 μm. Hymenium limited to the ventral surface of the basidiocarp, amphigenous, composed of basidia and simple cylindrical dikaryophyses. Probasidia cylindrical to clavate, pale yellow, 30–40 × 4 μm, without basal clamp connections, becoming bifurcate. Basidiospores cylindrical to reniform, curved, with an apiculum at the base, thin-walled, hyaline to pale yellow, 13–17 × 5–6 μm (15 × 5.5 μm on average, n = 10), l/w 2.5–3.2 (2.8 on average), 0–3-septate.Specimens examined. NEW ZEALAND, North Island, Tongariro National Park, Rotopounamu Walk, on dead branches of a broad-leaved tree, 18 June 2015, T. Shirouzu, PDD 107990; Whanganui National Park, Pipiriki, on dead branches of a broad-leaved tree, 11 June 2015, T. Shirouzu, PDD 107970 (TNS-F-65511), culture ICMP 21237; South Island, Fiordland National Park, Kepler Track, on dead branches of a woody plant, 10 May 2015, T. Shirouzu, PDD 107852; Kahurangi National Park, Wangapeka Track, on dead branches of a woody plant, 10 May 2014, T. Shirouzu, PDD 105022, culture ICMP 20491.Notes — Dacrymyces stenosporus is characterised by its pulvinate to irregularly discoid basidiocarps and slender 0–3-septate basidiospores. This species is similar to D. lacrymalis, D. minor, D. neoalbidus, and D. subantarcticensis in having pulvinate sessile basidiocarps, hyphae without clamp connections, and 0–3-septate thin-walled basidiospores. Dacrymyces lacrymalis (10–15.5 × 4.5–6 μm, McNabb 1973; 9.5–15 × 3.5–6 μm, Shirouzu et al. 2009) and D. subantarcticensis (10–13 × 4.5–6 μm, Burdsall & Laursen 2004) have shorter basidiospores, and D. minor is characterized by having smaller basidiocarps (0.5–2 mm diam, McNabb 1973; 1–2 mm diam, Shirouzu et al. 2009). Dacrymyces subantarcticensis and samples accepted here as D. lacrymalis and D. minor are phylogenetically distant from D. stenosporus (Fig. 1). Dacrymyces neoalbidus has white fruiting bodies and larger basidiospores (21–22 × 5–6 μm, as Dacrymycesalbidus, Kobayasi 1954, 1955).Shirouzu, sp. nov. — MycoBank MB817696; Fig. 2e, 7
Fig. 7
Dacrymyces parastenosporus PDD 104963. a. Basidiocarps; b. diagram showing longitudinal section of basidiocarp (dashed line: hymenium; dotted line: sterile marginal part); c. basidiospores; d. marginal hyphae; e. probasidium; f. developing basidium.
Differs from D. stenosporus by having longer probasidia.Etymology. From the Greek ‘para’ = near and the epithet ‘stenosporus’, referring to its similarity to D. stenosporus.Type. NEW ZEALAND, South Island, Arthur’s Pass National Park, Waimakariri River, on dead branches of a woody plant, 4 May 2014, T. Shirouzu (holotype PDD 104963; isotype TNS-F-65509, culture ex-type ICMP 20436).DNA sequences from the holotype — LC131395 (LSU), LC131432 (ITS).Basidiocarps scattered or gregarious, coalesced, pustulate to pulvinate, gyrose, sessile, orange yellow, firm-gelatinous, 0.5–1 mm high, 1–4 mm diam. Internal hyphae branched, septate, thin-walled, hyaline, 2–5 μm diam, without clamp connections. Marginal hyphae on sterile surfaces of basidiocarps cylindrical, straight or flexuous, septate, hyaline, with cylindrical thin-walled terminal cells of 20–30 × 2–3 μm. Hymenium limited to the ventral surface of the basidiocarp, amphigenous, composed of basidia and simple cylindrical dikaryophyses. Probasidia cylindrical to clavate, pale yellow, 40–50 × 5 μm, without basal clamp connections, becoming bifurcate. Basidiospores cylindrical, straight or slightly curved, with an apiculum at the base, thin-walled, hyaline to pale yellow, 14–17 × 4–6 μm (16 × 5 μm on average, n = 10), l/w 2.8–4.3 (3.4 on average), 0–3-septate.Specimens examined. NEW ZEALAND, North Island, Tararua Forest Park, Kiriwhakapapa Road, on dead branches of a broad-leaved tree, 6 June 2015, T. Shirouzu, PDD 107962; South Island, Craigieburn Forest Park, Dracophyllum Flat Track, on dead branches of Pinus radiata, 4 May 2014, T. Shirouzu, PDD 104960 (TNS-F-65508), culture ICMP 20433; Fiordland National Park, Lake Hauroko, on dead branches of a broad-leaved tree, 8 May 2015, T. Shirouzu, PDD 107843; Victoria Forest Park, Waimakariri Valley, on dead branches of a broad-leaved tree, 19 May 2015, T. Shirouzu, PDD 107895.Notes — Dacrymyces parastenosporus is characterised by its pustulate to pulvinate basidiocarps and slender 0–3-septate basidiospores. This species is similar to Dacrymyces stenosporus, but the latter species has shorter probasidia (30–40 × 4 μm). These two species are phylogenetically distant from one another (Fig. 1).Shirouzu, sp. nov. — MycoBank MB817697; Fig. 2f, 8
Fig. 8
Dacrymyces cylindricus PDD 105052. a. Basidiocarps; b. diagram showing longitudinal section of basidiocarp (dashed line: hymenium; dotted line: sterile marginal part); c. basidiospores; d. marginal hyphae; e. probasidium; f. developing basidium.
Differs from Dacrymyces ancyleus by the presence of smaller thick-walled basidiospores.Etymology. From the Latin ‘cylindricus’ = cylindrical, referring to the shape of the basidiocarps.Type. NEW ZEALAND, South Island, Kahurangi National Park, Kaituna Track, on dead branches of a broad-leaved tree, 15 May 2014, T. Shirouzu (holotype PDD 105052; isotype TNS-F-65492, culture ex-type ICMP 20517).DNA sequences from the holotype — LC131378 (LSU), LC131419 (ITS).Basidiocarps scattered, cylindrical to subulate, simple, stipitate-pileate, bearing a cylindrical to subglobose, sometimes subulate pileus, white to pale yellow, firm-gelatinous to soft-cartilaginous, 2–4 mm high, 2–3 mm diam. Internal hyphae branched, septate, thin-walled, hyaline, 2–4 μm diam, with clamp connections. Marginal hyphae on sterile surfaces of basidiocarps cylindrical, straight or flexuous, septate, hyaline, with irregularly shaped thin-walled terminal cells of 25–35 × 3 μm. Hymenium limited to the surface of the pileus, amphigenous, composed of basidia. Probasidia cylindrical to clavate, pale yellow, 40–50 × 4 μm, with basal clamp connections, becoming bifurcate. Basidiospores cylindrical to reniform, straight or curved, with an apiculum at the base, thick-walled, hyaline, 8–10 × 4–5 μm (9 × 4 μm on average, n = 10), l/w 2–2.5 (2.3 on average), 0–1-septate.Specimens examined. NEW ZEALAND, North Island, Tararua Forest Park, Kiriwhakapapa Road, 6 June 2015, T. Shirouzu, PDD 107960, culture ICMP 21247; Tongariro National Park, Rotopou namu Walk, on dead branches of a woody plant, 18 June 2015, T. Shirouzu, PDD 107989 (TNS-F-65493); South Island, Mt Richmond Forest Park, Pelorus Bridge, on dead branches of a woody plant, 30 May 2015, T. Shirouzu, PDD 107933; Nelson Lakes National Park, Lake Rotoiti, on dead branches of a broad-leaved tree, 1 June 2015, T. Shirouzu, PDD 107945.Notes — Dacrymyces cylindricus is characterised by its cylindrical to subulate basidiocarps, hyphae with clamp connections, and small thick-walled 1-septate basidiospores. The irregularly shaped terminal cells are also diagnostic characters of this species. Dacrymyces cylindricus has cylindrical to subulate basidiocarps, but its fruiting bodies lack the three-zoned internal structure of species in the genus Calocera. Furthermore, this new species is not placed in Dacryopinax because the pileus is cylindrical to subglobose and the hymenium is amphigenous. Consequently, this fungus should be assigned to the genus Dacrymyces. Dacrymyces cylindricus is similar to D. ancyleus and D. flabelliformis in having stipitate-pileate basidiocarps and clamp connections on hyphae. Dacrymyces ancyleus has larger thin-walled basidiospores (10.5–19.5 × 4–9 μm, Shirouzu et al. 2009). Dacrymyces flabelliformis has spathulate to flabelliform basidiocarps and larger thin-walled 0–3-septate basidiospores (12.5–14 × 5–6 μm, Burdsall & Laursen 2004). These two species are phylogenetically distant from D. cylindricus (Fig. 1).Shirouzu, sp. nov. — MycoBank MB817698; Fig. 2g, 9
Fig. 9
Dacrymyces citrinus PDD 107915. a. Basidiocarps; b. diagram showing longitudinal section of basidiocarp (dashed line: hymenium; dotted line: sterile marginal part); c. basidiospores; d. marginal hyphae; e. probasidium and dikaryophysis; f. developing basidium and dikaryophysis.
Differs from Dacrymyces enatus var. macrosporus by its wider basidiospores and the absence of branched dikaryophyses.Etymology. From the Latin ‘citrinus’ = pale yellow, referring to the colour of the basidiocarps.Type. NEW ZEALAND, South Island, Victoria Forest Park, Mt Haast Route, on dead branches of a woody plant, 22 May 2015, T. Shirouzu (holotype PDD 107915, isotype TNS-F-65490, culture ex-type ICMP 21227).DNA sequences from the holotype — LC131376 (LSU), LC131417 (ITS).Basidiocarps scattered or gregarious, sometimes coalesced, pustulate to pulvinate, sessile, pale yellow to yellow, firm-gelatinous, 0.5–1 mm high, 1–5 mm diam. Internal hyphae branched, septate, thin-walled, hyaline, 2–5 μm diam, with clamp connections. Marginal hyphae on sterile surfaces of basidiocarps cylindrical, straight or flexuous, septate, hyaline, with cylindrical thin-walled terminal cells of 20–40 × 2–5 μm. Hymenium limited to the ventral surface of the basidiocarp, amphigenous, composed of basidia and simple cylindrical dikaryophyses. Probasidia cylindrical to clavate, pale yellow, 35–45 × 5–6 μm, with basal clamp connections, becoming bifurcate. Basidiospores cylindrical to reniform, straight, with an apiculum at the base, thick-walled, hyaline to pale yellow, 11–14 × 7–9 μm (13 × 8 μm on average, n = 10), l/w 1.5–2 (1.7 on average), 0–3-septate.Specimens examined. NEW ZEALAND, North Island, Tararua Forest Park, Waiohine Gorge, on dead branches of a broad-leaved tree, 5 June 2015, T. Shirouzu, PDD 107949; Whanganui National Park, Atene Viewpoint Walk, on dead branches of a woody plant, 12 June 2015, T. Shirouzu, PDD 107979 (TNS-F-65491), culture ICMP 21239; South Island, Fiordland National Park, Lake Hauroko, on dead branches of a broad-leaved tree, 7 May 2015, T. Shirouzu, PDD 107837; Kahurangi National Park, Wangapeka Track, on dead branches of Leptospermum scoparium, 31 May 2015, T. Shirouzu, PDD 107934.Notes — Dacrymyces citrinus is characterised by the presence of pulvinate yellow basidiocarps, hyphae with clamp connections, and wide, thick-walled, 3-septate basidiospores. This species is similar to D. enatus var. macrosporus, D. paraphysatus, D. sichuanensis, and D. pachysporus in having pulvinate basidiocarps, hyphae with clamp connections, and 3-septate thick-walled basidiospores. Dacrymyces enatus var. macrosporus has thinner basidiospores (11–15.5 × 4.5–6.5 μm), branched dikaryophyses, and dark basidiocarps (McNabb 1973). Dacrymyces paraphysatus has longer basidiospores (13.5–21 × 5–7 μm) and branched dikaryophyses (McNabb 1973). Dacrymyces sichuanensis has smaller basidiocarps (1–2 mm diam), narrower basidiospores (12.5–15.6 × 4.5–6.5 μm), and branched dikaryophyses as discerned from a line drawing in Liu & Fan (1990). Dacrymyces pachysporus has smaller basidiocarps (0.5–2 mm diam), longer basidiospores (16–19 × 6–7 μm), and irregularly shaped terminal cells (Fig. 4). Dacrymyces citrinus is phylogenetically distant from D. pachysporus (Fig. 1). Some specimens of D. citrinus have slightly slender basidiospores (e.g. 13–14 × 6–7 μm, l/w 1.9–2.3, PDD 107979) but are phylogenetically indistinguishable from those with wider spores (Fig. 1).Shirouzu, sp. nov. — MycoBank MB817699; Fig. 2h, 10
Fig. 10
Dacrymyces cyrtosporus PDD 107980. a. Basidiocarps; b. diagram showing longitudinal section of basidiocarp (dashed line: hymenium; dotted line: sterile marginal part); c. basidiospores; d. marginal hyphae; e. probasidium; f. developing basidium.
Differs from D. sichuanensis by the absence of branched dikaryophyses.Etymology. From the Greek ‘cyrto’ = bent or curved and ‘sporus’ = spore, referring to the curved basidiospores.Type. NEW ZEALAND, North Island, Whanganui National Park, Atene Viewpoint Walk, on dead branches of a woody plant, 13 June 2015, T. Shirouzu (holotype PDD 107980; isotype TNS-F-65495).DNA sequences from the holotype — LC131381 (LSU), LC131422 (ITS).Basidiocarps scattered or gregarious, sometimes coalesced, pustulate to pulvinate, sessile, pale yellow to olive, firm-gelatinous, 0.5 mm high, 0.5–2 mm diam. Internal hyphae branched, septate, thin-walled, hyaline, 2–3 μm diam, with clamp connections. Marginal hyphae on sterile surfaces of basidiocarps cylindrical, straight or flexuous, septate, hyaline, with cylindrical thin-walled terminal cells of 15–45 × 2–3 μm. Hymenium limited to the ventral surface of the basidiocarp, amphigenous, composed of basidia and simple cylindrical dikaryophyses. Probasidia cylindrical to clavate, hyaline, 30–50 × 5–6 μm, with basal clamp connections, becoming bifurcate. Basidiospores cylindrical, curved, with an apiculum at the base, thick-walled, hyaline, 13–15 × 5–6 μm (14 × 5.5 μm on average, n = 10), l/w 2.2–3 (2.6 on average), 0–3-septate.Specimens examined. NEW ZEALAND, North Island, Tararua Forest Park, Kiriwhakapapa Road, on dead branches of a woody plant, 6 June 2015, T. Shirouzu, PDD 107957, culture ICMP 21245; Tararua Forest Park, Waiohine Gorge, on dead branches of a broad-leaved tree, 5 June 2015, T. Shirouzu, PDD 107951, culture ICMP 21244; PDD 107952 (TNS-F-65494); South Island, Fiordland National Park, Borland Nature Walk, on dead branches of a woody plant, 12 May 2015, T. Shirouzu, PDD 107867.Notes — Dacrymyces cyrtosporus is characterised by its pustulate to pulvinate basidiocarps, hyphae with clamp connections, and curved thick-walled 3-septate basidiospores. This species is similar to D. enatus var. macrosporus, D. paraphysatus, D. sichuanensis, D. pachysporus, and D. citrinus in having pulvinate basidiocarps, hyphae with clamp connections, and 3-septate thick-walled basidiospores. However, D. sichuanensis has branched dikaryophyses as discerned from a line drawing in Liu & Fan (1990). Dacrymyces enatus var. macrosporus has larger, dark basidiocarps (3–4 mm diam) and branched dikaryophyses (McNabb 1973). Dacrymyces paraphysatus has branched dikaryophyses and yellowish brown, larger basidiospores (13.5–21 × 5–7 μm, McNabb 1973). Dacrymyces pachysporus has irregularly shaped terminal cells (Fig. 5) and longer basidiospores (16–19 × 6–7 μm). Dacrymyces citrinus has larger basidiocarps (1–5 mm diam) and wider, straight basidiospores (11–14 × 7–9 μm). Dacrymyces cyrtosporus is phylogenetically distant from D. pachysporus and D. citrinus (Fig. 1).
Known species
(Batsch) Fr., Stirp. Agri Fems. 5: 67. 1827Type locality. Germany.Specimens examined. NEW ZEALAND, South Island, Fiordland National Park, Lake Hauroko, on dead branches of a woody plant, 8 May 2015, T. Shirouzu, PDD 107847, culture ICMP 21223; Granville Ecological Area, Granville Road, on dead branches of a woody plant, 6 May 2014, T. Shirouzu, PDD 104991, culture ICMP 20465.Notes — Calocera cornea was morphologically identified with reference to McNabb (1965a), Reid (1974), and Shirouzu et al. (2009). The sequences obtained in this study formed a clade with Japanese (TNS-F-21061, 21065) and North American (CBS 124.84, 125.84) strains identified as C. cornea (Fig. 1). Calocera cornea is a common species of Dacrymycetes and has been recorded worldwide (McNabb 1965a, Lowy 1971, Reid 1974, Shirouzu et al. 2009). The geographical and phylogenetic distributions of C. cornea seem wide and diverse, suggesting that it could be a species complex.Lloyd, Mycol. Writings 7 (75): 1357. 1925Type locality. Canterbury, New Zealand.Specimens examined. NEW ZEALAND, North Island, Whanganui National Park, Pipiriki, on dead branches of a broad-leaved tree, 11 June 2015, T. Shirouzu, PDD 107972, culture ICMP 21238; South Island, Mt Richmond Forest Park, Pelorus Bridge, on dead branches of a broad-leaved tree, 30 May 2015, T. Shirouzu, PDD 107930.Notes — Calocera fusca was morphologically identified with reference to McNabb (1965a). This species has also been recorded from the Juan Fernández Islands (McNabb 1965a). The sequence obtained in this study is the first DNA sequence data provided for C. fusca.cf. Berk., London J. Bot. 4: 61. 1845Type locality. Swan River, West Australia.Specimens examined. NEW ZEALAND, North Island, Kaimanawa Forest Park, Clements Mill Road, on dead branches of a woody plant, 16 June 2015, T. Shirouzu, PDD 107981, culture ICMP 21240; Tararua Forest Park, Waiotauru Track, on dead branches of a woody plant, 8 June 2015, T. Shirouzu, PDD 107969, culture ICMP 21236; South Island, Kahurangi National Park, Heaphy Track, on dead branches of a woody plant, 28 May 2015, T. Shirouzu, PDD 107929, culture ICMP 21231; Mt Aspiring National Park, Haast Pass Lookout, on dead branches of a woody plant, 15 May 2015, T. Shirouzu, PDD 107874, culture ICMP 21226; Nelson, Fringed Hill, on dead branches of a woody plant, 12 May 2014, T. Shirouzu, PDD 105033, culture ICMP 20502; Nelson Lakes National Park, Lake Rotoiti, on dead branches of a woody plant, 8 May 2014, T. Shirouzu, PDD 105005, culture ICMP 20480.Notes — These specimens were morphologically identified with reference to McNabb (1965a). Phylogenetic analysis separated the sequences obtained from the samples into three clades (Calocera cf. guepinioides 1, 2, and 3; Fig. 1). The specimens constituting each clade could not be morphologically distinguished, and the true clade of C. guepinioides could be not confirmed because DNA from the type strain was not included in this study. Calocera guepinioides has already been recorded from New Zealand (McNabb 1965a). This species has originally been described from Western Australia; the inclusion of samples from such areas is critically needed in phylogenetic and taxonomic studies.(Massee) McNabb, New Zealand J. Bot. 3: 46. 1965Type locality. Tasmania, Australia.Specimens examined. NEW ZEALAND, South Island, Fiordland National Park, Lake Hauroko, on dead branches of a woody plant, 8 May 2015, T. Shirouzu, PDD 107841, culture ICMP 21221; PDD 107842, culture ICMP 21222.Notes — Calocera lutea, originally described from Tasmania, was morphologically identified with reference to McNabb (1965a). This species has already been recorded from New Zealand (McNabb 1965a). The sequences obtained in this study formed a clade with an Australian strain (CBS 291.82; Fig. 1). Seifert (1983) has reported that a decomposition test using the Australian strain of C. lutea revealed features of white rot, but our specimens collected in New Zealand showed characteristics of brown rot, such as brown discoloration and cracking into roughly cubical pieces of wood.Burds. & Laursen, Mem. New York Bot. Gard. 89: 109. 2004Type locality. Auckland Islands, New Zealand.Specimens examined. NEW ZEALAND, South Island, Fiordland National Park, Borland Nature Walk, on dead branches of a broad-leaved tree, 12 May 2015, T. Shirouzu, PDD 107863, culture ICMP 21225; Nelson Lakes National Park, Lake Rotoiti, on dead branches of a broad-leaved tree, 1 June 2015, T. Shirouzu, PDD 107944, culture ICMP 21233.Notes — Dacrymyces flabelliformis was morphologically identified with reference to the original description (Burdsall & Laursen 2004). The sequences obtained in this study were closely related to the ex-type strain collected from New Zealand (HHB-18308; Fig. 1). This species is presumably endemic to New Zealand.L.S. Olive, Bull. Torrey Bot. Club 85: 108. 1958Type locality. Tahiti.Specimens examined. NEW ZEALAND, South Island, Fiordland National Park, Kepler Track, on dead branches of a woody plant, 10 May 2015, T. Shirouzu, PDD 107851, culture ICMP 21224; Kahurangi National Park, Wangapeka Track, on dead branches of a broad-leaved tree, 31 May 2015, T. Shirouzu, PDD 107939, culture ICMP 21232.Notes — Dacrymyces intermedius, originally described from Tahiti, was morphologically identified with reference to the original description (Olive 1958) and that in McNabb (1973). The species has not been reported from any other regions of the world, and no other DNA sequence data are available.cf. P. Karst., Bidrag Kannedom Finlands Natur Folk 48: 459. 1889Type locality. Mustiala, Finland.Specimens examined. NEW ZEALAND, South Island, Granville Ecological Area, Granville Road, on dead branches of a woody plant, 6 May 2014, T. Shirouzu, PDD 104992, culture ICMP 20466; PDD 104993, culture ICMP 20467.Notes — These specimens were morphologically identified with reference to McNabb (1973) and Shirouzu et al. (2009). The sequences obtained from the New Zealand specimens were related to that of a Japanese strain (TNS-F-21049); however, a second Japanese strain (TNS-F-20150), although morphologically similar, was genetically distinct (Fig. 1). Sequences from the type specimen or authentically identified specimens from the type locality are needed to clarify the taxonomy of this species.McNabb, New Zealand J. Bot. 11: 493. 1973Type locality. Auckland, New Zealand.Specimens examined. NEW ZEALAND, North Island, Tararua Forest Park, Kiriwhakapapa Road, on dead branches of a broad-leaved tree, 6 June 2015, T. Shirouzu, PDD 107953, culture ICMP 21235; South Island, Greymouth, Point Elizabeth, on dead branches of a broad-leaved tree, 18 May 2015, T. Shirouzu, PDD 107892.Notes — Dacrymyces novae-zelandiae, described on the basis of a New Zealand type, was morphologically identified with reference to the original description (McNabb 1973). The sequences obtained in this study were closely related to a New Zealand strain (CBS 295.82) collected near the type locality, but a morphologically similar Japanese strain was genetically distinct (TNS-F-21038; Fig. 1). This species is presumably endemic to New Zealand.cf. Nees, Syst. Mycol. 2: 250. 1822Type locality. Europe.Specimens examined. NEW ZEALAND, South Island, Farewell Spit, on dead branches of a woody plant, 13 May 2014, T. Shirouzu, PDD 105038, culture ICMP 20505.Notes — This specimen was morphologically identified with reference to McNabb (1973), Reid (1974), and Shirouzu et al. (2009). The sequence obtained in this study was very close to that from a German strain (AF291309; Weiß & Oberwinkler 2001) and close to but distinct from Japanese strains identified as D. stillatus (TNS-F-15727) and D. minor (TNS-F-15720,15721; Fig. 1). According to McNabb (1973), D. stillatus can be distinguished from D. minor by its larger basidiocarps and thicker-walled basidiospores. Dacrymyces stillatus is a common species of Dacrymycetes and has been recorded worldwide (Lowy 1971, McNabb 1973, Reid 1974, Shirouzu et al. 2009).Burds. & Laursen, Mem. New York Bot. Gard. 89: 107. 2004Type locality. Campbell Island, New Zealand.Specimens examined. NEW ZEALAND, North Island, Tongariro National Park, Rotopounamu Walk, on dead branches of a woody plant, 18 June 2015, T. Shirouzu, PDD 107988; South Island, Nelson Lakes National Park, Lake Rotoiti, on dead branches of a woody plant, 1 June 2015, T. Shirouzu, PDD 107948, culture ICMP 21234.Notes — Dacrymyces subantarcticensis was morphologically identified with reference to the original description (Burdsall & Laursen 2004). The sequences obtained in this study were closely related to the type strain collected from Campbell Island (HHB-18220; Fig. 1). This species is presumably endemic to New Zealand.(Berk.) McNabb, New Zealand J. Bot. 3: 220. 1965Type locality. Tasmania, Australia.Specimens examined. NEW ZEALAND, South Island, Arthur’s Pass National Park, Waimakariri River, on dead branches of Nothofagus solandri, 4 May 2014, T. Shirouzu, PDD 104962, ICMP 20435; Denniston, Coalbrookdale Walk, on dead branches of a broad-leaved tree, 27 May 2015, T. Shirouzu, PDD 107924, culture ICMP 21229.Notes — Heterotextus miltinus, originally described from Tasmania, was morphologically identified with reference to McNabb (1965d). This species has already been recorded from New Zealand (McNabb 1965d). The sequences referred to H. miltinus in this study were genetically somewhat divergent but in a close sister relationship (Fig. 1). One of the isolates exactly matched a New Zealand strain (ICMP 16702, isolated from PDD 89156) from the North Island (Fig. 1).
DISCUSSION
Dacrymycetes species in the Southern Hemisphere
The phylogenetic hypothesis of Dacrymycetes was updated by the addition of eight new taxa as well as specimens referable to previously described species with no available DNA sequence data, namely, C. fusca, C. cf. guepinioides, and D. intermedius. Two monophyletic groups, one comprising D. longistipitatus and D. pachysporus and the other consisting of D. cylindricus, D. citrinus, and D. cyrtosporus, were each composed only of New Zealand species (Fig. 1). These clades might be unique lineages useful for characterisation of the dacrymycetous mycoflora of New Zealand.Although specimens identified as Dacrymyces cf. stillatus, Dacrymyces cf. microsporus, and C. cornea were morphologically and phylogenetically related to strains from the Northern Hemisphere, unique species characterising New Zealand or the Southern Hemisphere Dacrymycetes were also collected in this study. The eight newly described taxa as well as seven known species, i.e., C. fusca, C. cf. guepinioides, C. lutea, D. flabelliformis, D. intermedius, D. subantarcticensis, and H. miltinus – which have been collected from New Zealand, Australia, Tahiti, and the Juan Fernández Islands (McNabb 1965a, d, 1973, Burdsall & Laursen 2004), have rarely or never been reported from the Northern Hemisphere. These known species were identified on the basis of morphology with the exception of D. flabelliformis and D. subantarcticensis, for which sequences from type specimens or authentically identified specimens from type localities are lacking. We believe that these eight new and seven known species reflect the unique Dacrymycetes mycoflora in the Southern Hemisphere and complement existing knowledge of the species diversity of this class.Two new species, C. pedicellata and D. parastenosporus, were collected from dead branches of Pinus radiata, a conifer introduced from the west coast of the United States. We believe, however, that these dacrymycetous species are native to New Zealand, as they have never been reported from the original habitats of P. radiata and were additionally found on dead branches of unidentified local trees in the collection sites.
Morphologically indistinguishable species
Among the newly described taxa, six species – D. citrinus, D. cylindricus, D. cyrtosporus, D. longistipitatus, D. pachysporus, and D. pedicellata – were morphologically and phylogenetically distinct from other species. Two new species, D. stenosporus and D. parastenosporus, were morphologically similar to each other, but were described as two different species because they were phylogenetically distant from one another (Fig. 1). Dacrymyces parastenosporus can be distinguished from D.
stenosporus in having longer probasidia. Although the size of probasidia has not been considered to be a significant criterion compared with characteristics such as shape and size of basidiocarps, basidiospores, and marginal hyphae, it might be a useful feature to distinguish some dacrymycetous species.The molecular phylogenetic analysis separated the sequences obtained from C. cf. guepinioides specimens into three clades (C. cf. guepinioides 1, 2, and 3; Fig. 1). These specimens share the morphological features of small and typically spathulate basidiocarps, 1–3-septate spores, and clamp connections on hyphae that characterize C. guepinioides (McNabb 1965a). The clade corresponding to C. guepinioides s.str. could not be identified because no morphological differences were found among the three clades and no sequence exists from the type specimen. This species displays wide variation in the shape of basidiocarps (McNabb 1965a) and therefore might be separated into two or more species.
Higher classification in Dacrymycetes
Familial and generic classifications in Dacrymycetes are based on morphological criteria such as the shape and internal hyphal structure of basidiocarps, the position of the hymenium, and presence or absence of developed marginal hyphae (McNabb 1964, 1965a, 1965b, 1965c, 1965d, 1965e, 1966, 1973, McNabb & Talbot 1973, Reid 1974, Jülich 1981). However, this morphology-based classification has often conflicted with the results of molecular phylogenetic analyses, and Calocera, Cerinomyces, Dacrymyces, and Dacryopinax have been shown to be non-monophyletic genera (Fig. 1; Shirouzu et al. 2009, 2013a). As a result, Dacrymycetaceae and Cerinomycetaceae, the two families in Dacrymycetales, are also revealed to be non-monophyletic in various phylogenetic trees. No useful phenotypic features have been found for classification of families and genera that reflect their phylogenetic relationships.The phylogenetic heterogeneity of the studied genera and families became even more obvious upon the addition of the sequences of New Zealand specimens. The polyphyletic nature of Dacrymyces and Calocera was particularly evident (Fig. 1). The genus Dacrymyces is mainly characterised by sessile pulvinate, turbinate, or sometimes stipitate basidiocarps, a homogeneous intra-structure of fruiting bodies, and an amphigenous hymenium (McNabb 1973), but its delineation has often been obscure (e.g. Reid 1974). The results of molecular phylogenetic analyses have supported this ambiguity (Shirouzu et al. 2007, 2009, 2013a), and Dacrymyces appears to be the most phylogenetically scattered genus in the Dacrymycetales clade (Fig. 1). The genus Calocera is characterised by cylindrical basidiocarps, a three-zoned intra-structure of fruiting bodies, and an amphigenous hymenium (McNabb 1965a). Because previous studies have demonstrated the sister relationship of C. cornea and C. viscosa (Weiß & Oberwinkler 2001, Shirouzu et al. 2007, 2009), the genus Calocera has been considered to be a monophyletic taxon. In the present phylogenetic tree, however, many of the Calocera species used in this study, such as C.
arborea, C. bambusicola, C.
fusca, C. cf. guepinioides, C. glossoides, C. lutea, C. pedicellata, and C. sinensis, were found to be dispersed throughout the Dacrymycetaceae clade (Fig. 1), suggesting the convergent evolution of calocera-like cylindrical basidiocarps in this family.Our field investigations in New Zealand have improved the current knowledge of the diversity and phylogeny of Southern Hemisphere Dacrymycetes. In this class, however, taxon sampling is still insufficient to estimate a reliable phylogeny and establish a higher classification system (Shirouzu et al. 2013a). In addition, a recent study has suggested the existence of hidden dacrymycetous lineages that rarely or perhaps never produce visible fruiting bodies – the structures providing almost all morphological criteria used for classification purposes (Shirouzu et al. 2016). To unveil the whole range of phylogenetic diversity of Dacrymycetes, mycelium strains not associated with basidiocarps as well as lineages with visible fruiting bodies must be incorporated. Our survey of the diversity of Dacrymycetes in the Southern Hemisphere has increased taxon sampling and thus improves the reliability of phylogenetic analyses that can serve as a basis for establishing a stable classification of Dacrymycetes.
Authors: Andrew B Leslie; Jeremy M Beaulieu; Hardeep S Rai; Peter R Crane; Michael J Donoghue; Sarah Mathews Journal: Proc Natl Acad Sci U S A Date: 2012-09-17 Impact factor: 11.205