Literature DB >> 29150717

Genetic diversity and phylogenetic study of the Chinese Gelao ethnic minority via 23 Y-STR loci.

Pengyu Chen1,2, Yanyan Han3, Guanglin He4, Haibo Luo4, Tianzhen Gao4, Feng Song4, Dengfu Wan5, Jian Yu6,7, Yiping Hou8.   

Abstract

Haplotype diversity for 23 Y chromosomal short tandem repeat (Y-STR) loci included in the PowerPlex® Y23 System was analyzed in the Chinese Gelao minority group of 234 unrelated males living in Daozhen Gelao-Miao Autonomous County in Guizhou Province, southwest China. A total of 216 different haplotypes were detected, of which 199 haplotypes were unique. The overall haplotype diversity (HD) and discrimination capacity (DC) were 0.9996 and 0.9231, respectively. The gene diversity (GD) ranged from 0.4159 (DYS438) to 0.9650 (DYS385a/b). The haplotype frequencies varied from 0.0043 to 0.0128. The population data presented here showed high genetic polymorphism and extraordinary discriminatory power in the studied population. Population difference was observed between the Chinese Gelao ethnicity and 42 populations out of overall 59 neighboring populations in Asia region. Both multidimensional scaling (MDS) and the phylogenetic tree demonstrated that the genetic structure affinity and differentiation with Chinese Gelao ethnicity were identified in those populations geographically adjacent (Hunan Han) and distant (Chinese Tibetan), respectively. In conclusion, our study enriched the Chinese ethnic genetic information and could be used as a powerful tool in forensic genetics for male testing, paternal lineage analysis, and Gelao ethnic population evolutionary studies.

Entities:  

Keywords:  Chinese Gelao ethnicity; Genetic relationship; Phylogenetic analysis; PowerPlex® Y23 System

Mesh:

Year:  2017        PMID: 29150717     DOI: 10.1007/s00414-017-1743-y

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  9 in total

1.  The forensic landscape and the population genetic analyses of Hainan Li based on massively parallel sequencing DNA profiling.

Authors:  Haoliang Fan; Zhengming Du; Fenfen Wang; Xiao Wang; Shao-Qing Wen; Lingxiang Wang; Panxin Du; Hai Liu; Shengping Cao; Zhenming Luo; Bingbing Han; Peiyu Huang; Bofeng Zhu; Pingming Qiu
Journal:  Int J Legal Med       Date:  2021-04-13       Impact factor: 2.686

2.  Haplotype diversity and phylogenetic characteristics for Guanzhong Han population from Northwest China via 38 Y-STRs using Yfiler™ Platinum Amplification System.

Authors:  Luyao Li; Lilan Yao; Xin He; Huilin Gong; Yuan Deng; Mei Luan; Guanglin He; Fuquan Jia; Pengyu Chen
Journal:  Mol Genet Genomic Med       Date:  2020-03-12       Impact factor: 2.183

3.  Genetic Reconstruction and Forensic Analysis of Chinese Shandong and Yunnan Han Populations by Co-Analyzing Y Chromosomal STRs and SNPs.

Authors:  Caiyong Yin; Kaiyuan Su; Ziwei He; Dian Zhai; Kejian Guo; Xueyun Chen; Li Jin; Shilin Li
Journal:  Genes (Basel)       Date:  2020-07-03       Impact factor: 4.096

4.  Forensic characterization and genetic polymorphisms of 19 X-chromosomal STRs in 1344 Han Chinese individuals and comprehensive population relationship analyses among 20 Chinese groups.

Authors:  Pengyu Chen; Guanglin He; Xing Zou; Mengge Wang; Fuquan Jia; Huiru Bai; Jida Li; Jian Yu; Yanyan Han
Journal:  PLoS One       Date:  2018-09-20       Impact factor: 3.240

5.  Genetic structure and forensic characteristics of Tibeto-Burman-speaking Ü-Tsang and Kham Tibetan Highlanders revealed by 27 Y-chromosomal STRs.

Authors:  Guanglin He; Zheng Wang; Yongdong Su; Xing Zou; Mengge Wang; Xu Chen; Bo Gao; Jing Liu; Shouyu Wang; Yiping Hou
Journal:  Sci Rep       Date:  2019-05-23       Impact factor: 4.379

6.  Genetic diversity, forensic feature, and phylogenetic analysis of Guizhou Tujia population via 19 X-STRs.

Authors:  Li Luo; Hongyan Gao; Lilan Yao; Fei Long; Hao Zhang; Lushun Zhang; Yong Liu; Jian Yu; Limei Yu; Pengyu Chen
Journal:  Mol Genet Genomic Med       Date:  2020-09-02       Impact factor: 2.183

7.  Fine-Scale Population Admixture Landscape of Tai-Kadai-Speaking Maonan in Southwest China Inferred From Genome-Wide SNP Data.

Authors:  Jing Chen; Guanglin He; Zheng Ren; Qiyan Wang; Yubo Liu; Hongling Zhang; Meiqing Yang; Han Zhang; Jingyan Ji; Jing Zhao; Jianxin Guo; Jinwen Chen; Kongyang Zhu; Xiaomin Yang; Rui Wang; Hao Ma; Le Tao; Yilan Liu; Qu Shen; Wenjiao Yang; Chuan-Chao Wang; Jiang Huang
Journal:  Front Genet       Date:  2022-02-17       Impact factor: 4.599

8.  Genetic structure and polymorphisms of Gelao ethnicity residing in southwest china revealed by X-chromosomal genetic markers.

Authors:  Pengyu Chen; Guanglin He; Xing Zou; Mengge Wang; Haibo Luo; Limei Yu; Xijie Hu; Mijia Xia; Hongyan Gao; Jian Yu; Yiping Hou; Yanyan Han
Journal:  Sci Rep       Date:  2018-10-01       Impact factor: 4.379

9.  Genetic diversities and phylogenetic analyses of three Chinese main ethnic groups in southwest China: A Y-Chromosomal STR study.

Authors:  Pengyu Chen; Guanglin He; Xing Zou; Xin Zhang; Jida Li; Zhisong Wang; Hongyan Gao; Li Luo; Zhongqing Zhang; Jian Yu; Yanyan Han
Journal:  Sci Rep       Date:  2018-10-18       Impact factor: 4.379

  9 in total

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