Literature DB >> 29149549

Workflow for Target-Oriented Parametrization of an Enhanced Mechanistic Cell Culture Model.

Sophia Ulonska1, Paul Kroll1,2, Jens Fricke1,2, Christoph Clemens3, Raphael Voges3, Markus M Müller3, Christoph Herwig1,2.   

Abstract

The goal of this study is to develop a macroscopic mechanistic model describing growth and production within fed-batch cultivations of CHO cells. The model should be used for process characterization as well as for process monitoring including real-time parameter adaptations. The model proved to be able to describe a data-set of 40 processes differing in clones, scales, and process conditions with a normalized root mean square error of approximately 10%. However, due to limited parameter identifiability and limited knowledge about physiologically meaningful parameter values, a broad range of parameters could describe the data with similar quality. This hampered comparison of the model parameters as well as their real-time estimation. Therefore an iterative workflow combining techniques like sensitivity and identifiability analysis, analysis of the specific rates as well as structural adaptations of the parameter space is developed. By applying it the parameter variability could be reduced by 80% with similar predictive power as the original parameters. Summing up, based on a mechanistic CHO model, a generic and transferrable workflow is created for target-oriented parameter estimation in case of limited parameter identifiability. Finally, we suggest a methodology, which fits ideally into the frame of Process Analytical Technology aiming to increase process understanding.
© 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  CHO cells; bioprocess models; model analysis; parameter identification; workflow

Mesh:

Year:  2017        PMID: 29149549     DOI: 10.1002/biot.201700395

Source DB:  PubMed          Journal:  Biotechnol J        ISSN: 1860-6768            Impact factor:   4.677


  5 in total

1.  Digital Twins in Biomanufacturing.

Authors:  Steffen Zobel-Roos; Axel Schmidt; Lukas Uhlenbrock; Reinhard Ditz; Dirk Köster; Jochen Strube
Journal:  Adv Biochem Eng Biotechnol       Date:  2021       Impact factor: 2.635

2.  Digital Twins and Their Role in Model-Assisted Design of Experiments.

Authors:  Kim B Kuchemüller; Ralf Pörtner; Johannes Möller
Journal:  Adv Biochem Eng Biotechnol       Date:  2021       Impact factor: 2.635

3.  Online estimation of changing metabolic capacities in continuous Corynebacterium glutamicum cultivations growing on a complex sugar mixture.

Authors:  Peter Sinner; Marlene Stiegler; Oliver Goldbeck; Gerd M Seibold; Christoph Herwig; Julian Kager
Journal:  Biotechnol Bioeng       Date:  2021-12-11       Impact factor: 4.395

4.  Generic and specific recurrent neural network models: Applications for large and small scale biopharmaceutical upstream processes.

Authors:  Jens Smiatek; Christoph Clemens; Liliana Montano Herrera; Sabine Arnold; Bettina Knapp; Beate Presser; Alexander Jung; Thomas Wucherpfennig; Erich Bluhmki
Journal:  Biotechnol Rep (Amst)       Date:  2021-05-28

5.  Population balance modelling captures host cell protein dynamics in CHO cell cultures.

Authors:  Sakhr Alhuthali; Cleo Kontoravdi
Journal:  PLoS One       Date:  2022-03-23       Impact factor: 3.240

  5 in total

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