Literature DB >> 29148494

SDmixer-a versatile software tool for spectral demixing of multicolor single molecule localization data.

Georgi Tadeus1, André Lampe, Jan Schmoranzer.   

Abstract

Spectral demixing (SD) offers multicolor single molecule localization microscopy (SMLM) with low crosstalk and without the need to correct for registration errors. Here, we present SDmixer, a versatile, open-source software tool that enables any laboratory to perform rapid SD-based multicolor SMLM. A graphic user interface allows non-experts to process 2D or 3D data sets from any SML software and to reconstruct the super-resolved multicolor images with flexible output options.

Entities:  

Year:  2015        PMID: 29148494     DOI: 10.1088/2050-6120/3/3/037001

Source DB:  PubMed          Journal:  Methods Appl Fluoresc        ISSN: 2050-6120            Impact factor:   3.009


  4 in total

1.  The synaptic scaffold protein MPP2 interacts with GABAA receptors at the periphery of the postsynaptic density of glutamatergic synapses.

Authors:  Bettina Schmerl; Niclas Gimber; Benno Kuropka; Alexander Stumpf; Jakob Rentsch; Stella-Amrei Kunde; Judith von Sivers; Helge Ewers; Dietmar Schmitz; Christian Freund; Jan Schmoranzer; Nils Rademacher; Sarah A Shoichet
Journal:  PLoS Biol       Date:  2022-03-21       Impact factor: 8.029

2.  Simultaneous Multicolor DNA-PAINT without Sequential Fluid Exchange Using Spectral Demixing.

Authors:  Niclas Gimber; Sebastian Strauss; Ralf Jungmann; Jan Schmoranzer
Journal:  Nano Lett       Date:  2022-03-15       Impact factor: 12.262

3.  splitSMLM, a spectral demixing method for high-precision multi-color localization microscopy applied to nuclear pore complexes.

Authors:  Leonid Andronov; Rachel Genthial; Didier Hentsch; Bruno P Klaholz
Journal:  Commun Biol       Date:  2022-10-17

4.  Jamming and overpacking fuzzy microgels: Deformation, interpenetration, and compression.

Authors:  Gaurasundar M Conley; Philippe Aebischer; Sofi Nöjd; Peter Schurtenberger; Frank Scheffold
Journal:  Sci Adv       Date:  2017-10-20       Impact factor: 14.136

  4 in total

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