Literature DB >> 29148478

A joint Richardson-Lucy deconvolution algorithm for the reconstruction of multifocal structured illumination microscopy data.

Florian Ströhl1, Clemens F Kaminski.   

Abstract

We demonstrate the reconstruction of images obtained by multifocal structured illumination microscopy, MSIM, using a joint Richardson-Lucy, jRL-MSIM, deconvolution algorithm, which is based on an underlying widefield image-formation model. The method is efficient in the suppression of out-of-focus light and greatly improves image contrast and resolution. Furthermore, it is particularly well suited for the processing of noise corrupted data. The principle is verified on simulated as well as experimental data and a comparison of the jRL-MSIM approach with the standard reconstruction procedure, which is based on image scanning microscopy, ISM, is made. Our algorithm is efficient and freely available in a user friendly software package.

Entities:  

Year:  2015        PMID: 29148478     DOI: 10.1088/2050-6120/3/1/014002

Source DB:  PubMed          Journal:  Methods Appl Fluoresc        ISSN: 2050-6120            Impact factor:   3.009


  19 in total

1.  Image restoration approach to address reduced modulation contrast in structured illumination microscopy.

Authors:  Nurmohammed Patwary; Ana Doblas; Chrysanthe Preza
Journal:  Biomed Opt Express       Date:  2018-03-13       Impact factor: 3.732

2.  Enhancing multi-spot structured illumination microscopy with fluorescence difference.

Authors:  Edward N Ward; Frida H Torkelsen; Robert Pal
Journal:  R Soc Open Sci       Date:  2018-03-14       Impact factor: 2.963

3.  Cherenkov-excited luminescence scanned imaging using scanned beam differencing and iterative deconvolution in dynamic plan radiation delivery in a human breast phantom geometry.

Authors:  Mengyu Jeremy Jia; Petr Bruza; Jacqueline M Andreozzi; Lesley A Jarvis; David J Gladstone; Brian W Pogue
Journal:  Med Phys       Date:  2019-05-18       Impact factor: 4.071

4.  Neuronal Activity Drives Astroglial Connexin 30 in Perisynaptic Processes and Shapes Its Functions.

Authors:  Grégory Ghézali; Flora Vasile; Nathan Curry; Marcus Fantham; Giselle Cheung; Pascal Ezan; Martine Cohen-Salmon; Clemens Kaminski; Nathalie Rouach
Journal:  Cereb Cortex       Date:  2020-03-21       Impact factor: 5.357

5.  Virtual k-Space Modulation Optical Microscopy.

Authors:  Cuifang Kuang; Ye Ma; Renjie Zhou; Guoan Zheng; Yue Fang; Yingke Xu; Xu Liu; Peter T C So
Journal:  Phys Rev Lett       Date:  2016-07-06       Impact factor: 9.161

6.  Isolation and Imaging of His- and RFP-tagged Amyloid-like Proteins from Caenorhabditis elegans by TEM and SIM.

Authors:  Amberley D Stephens; Meng Lu; Gabriele S Kaminski Schierle
Journal:  Bio Protoc       Date:  2019-11-05

7.  Microglia control glutamatergic synapses in the adult mouse hippocampus.

Authors:  Bernadette Basilico; Laura Ferrucci; Patrizia Ratano; Maria T Golia; Alfonso Grimaldi; Maria Rosito; Valentina Ferretti; Ingrid Reverte; Caterina Sanchini; Maria C Marrone; Maria Giubettini; Valeria De Turris; Debora Salerno; Stefano Garofalo; Marie-Kim St-Pierre; Micael Carrier; Massimiliano Renzi; Francesca Pagani; Brijesh Modi; Marcello Raspa; Ferdinando Scavizzi; Cornelius T Gross; Silvia Marinelli; Marie-Ève Tremblay; Daniele Caprioli; Laura Maggi; Cristina Limatola; Silvia Di Angelantonio; Davide Ragozzino
Journal:  Glia       Date:  2021-10-18       Impact factor: 8.073

8.  Live-cell super-resolution microscopy reveals a primary role for diffusion in polyglutamine-driven aggresome assembly.

Authors:  Meng Lu; Luca Banetta; Laurence J Young; Edward J Smith; Gillian P Bates; Alessio Zaccone; Gabriele S Kaminski Schierle; Alan Tunnacliffe; Clemens F Kaminski
Journal:  J Biol Chem       Date:  2018-11-06       Impact factor: 5.157

9.  A Guide to Structured Illumination TIRF Microscopy at High Speed with Multiple Colors.

Authors:  Laurence J Young; Florian Ströhl; Clemens F Kaminski
Journal:  J Vis Exp       Date:  2016-05-30       Impact factor: 1.355

10.  Nonsmooth Convex Optimization for Structured Illumination Microscopy Image Reconstruction.

Authors:  Jérôme Boulanger; Nelly Pustelnik; Laurent Condat; Lucie Sengmanivong; Tristan Piolot
Journal:  Inverse Probl       Date:  2018-07-12       Impact factor: 2.408

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