Literature DB >> 29144454

Dynamics of P-type ATPase transport revealed by single-molecule FRET.

Mateusz Dyla1,2,3, Daniel S Terry4, Magnus Kjaergaard1,2,3,5, Thomas L-M Sørensen6, Jacob Lauwring Andersen1,2, Jens P Andersen7, Charlotte Rohde Knudsen2, Roger B Altman4, Poul Nissen1,2,3, Scott C Blanchard4.   

Abstract

Phosphorylation-type (P-type) ATPases are ubiquitous primary transporters that pump cations across cell membranes through the formation and breakdown of a phosphoenzyme intermediate. Structural investigations suggest that the transport mechanism is defined by conformational changes in the cytoplasmic domains of the protein that are allosterically coupled to transmembrane helices so as to expose ion binding sites to alternate sides of the membrane. Here, we have used single-molecule fluorescence resonance energy transfer to directly observe conformational changes associated with the functional transitions in the Listeria monocytogenes Ca2+-ATPase (LMCA1), an orthologue of eukaryotic Ca2+-ATPases. We identify key intermediates with no known crystal structures and show that Ca2+ efflux by LMCA1 is rate-limited by phosphoenzyme formation. The transport process involves reversible steps and an irreversible step that follows release of ADP and extracellular release of Ca2+.

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Year:  2017        PMID: 29144454      PMCID: PMC5872817          DOI: 10.1038/nature24296

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  50 in total

1.  Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues.

Authors:  Chikashi Toyoshima; Hiromi Nomura; Takeo Tsuda
Journal:  Nature       Date:  2004-09-26       Impact factor: 49.962

Review 2.  The sarcoplasmic Ca2+-ATPase: design of a perfect chemi-osmotic pump.

Authors:  Jesper V Møller; Claus Olesen; Anne-Marie L Winther; Poul Nissen
Journal:  Q Rev Biophys       Date:  2010-11       Impact factor: 5.318

3.  Characterization of a Listeria monocytogenes Ca(2+) pump: a SERCA-type ATPase with only one Ca(2+)-binding site.

Authors:  Kristina Faxén; Jacob Lauwring Andersen; Pontus Gourdon; Natalya Fedosova; Jens Preben Morth; Poul Nissen; Jesper Vuust Møller
Journal:  J Biol Chem       Date:  2010-11-03       Impact factor: 5.157

Review 4.  A practical guide to single-molecule FRET.

Authors:  Rahul Roy; Sungchul Hohng; Taekjip Ha
Journal:  Nat Methods       Date:  2008-06       Impact factor: 28.547

Review 5.  Ultra-stable organic fluorophores for single-molecule research.

Authors:  Qinsi Zheng; Manuel F Juette; Steffen Jockusch; Michael R Wasserman; Zhou Zhou; Roger B Altman; Scott C Blanchard
Journal:  Chem Soc Rev       Date:  2014-02-21       Impact factor: 54.564

6.  Participation of H+ in the Ca2(+)-induced conformational transition of 4-nitro-2,1,3-benzoxadiazole-labeled sarcoplasmic reticulum ATPase.

Authors:  S Wakabayashi; T Ogurusu; M Shigekawa
Journal:  Biochemistry       Date:  1990-11-27       Impact factor: 3.162

7.  The transport mechanism of bacterial Cu+-ATPases: distinct efflux rates adapted to different function.

Authors:  Daniel Raimunda; Manuel González-Guerrero; Blaise W Leeber; José M Argüello
Journal:  Biometals       Date:  2011-01-06       Impact factor: 2.949

Review 8.  Ca2+ versus Mg2+ coordination at the nucleotide-binding site of the sarcoplasmic reticulum Ca2+-ATPase.

Authors:  Martin Picard; Anne-Marie Lund Jensen; Thomas L-M Sørensen; Philippe Champeil; Jesper Vuust Møller; Poul Nissen
Journal:  J Mol Biol       Date:  2007-02-07       Impact factor: 5.469

9.  Crystal structure of D351A and P312A mutant forms of the mammalian sarcoplasmic reticulum Ca(2+) -ATPase reveals key events in phosphorylation and Ca(2+) release.

Authors:  Alexandre Marchand; Anne-Marie Lund Winther; Peter Joakim Holm; Claus Olesen; Cedric Montigny; Bertrand Arnou; Philippe Champeil; Johannes D Clausen; Bente Vilsen; Jens Peter Andersen; Poul Nissen; Christine Jaxel; Jesper Vuust Møller; Marc le Maire
Journal:  J Biol Chem       Date:  2008-03-20       Impact factor: 5.157

10.  Substrate-modulated gating dynamics in a Na+-coupled neurotransmitter transporter homologue.

Authors:  Yongfang Zhao; Daniel S Terry; Lei Shi; Matthias Quick; Harel Weinstein; Scott C Blanchard; Jonathan A Javitch
Journal:  Nature       Date:  2011-04-24       Impact factor: 49.962

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  20 in total

1.  Single-molecule FRET methods to study the dynamics of proteins at work.

Authors:  Hisham Mazal; Gilad Haran
Journal:  Curr Opin Biomed Eng       Date:  2019-08-23

2.  Practical Considerations for Atomistic Structure Modeling with Cryo-EM Maps.

Authors:  Doo Nam Kim; Dominik Gront; Karissa Y Sanbonmatsu
Journal:  J Chem Inf Model       Date:  2020-05-18       Impact factor: 4.956

3.  Cryo-EM analysis provides new mechanistic insight into ATP binding to Ca2+ -ATPase SERCA2b.

Authors:  Yuxia Zhang; Satoshi Watanabe; Akihisa Tsutsumi; Hiroshi Kadokura; Masahide Kikkawa; Kenji Inaba
Journal:  EMBO J       Date:  2021-08-30       Impact factor: 14.012

4.  Redistribution of SERCA calcium pump conformers during intracellular calcium signaling.

Authors:  Olga N Raguimova; Nikolai Smolin; Elisa Bovo; Siddharth Bhayani; Joseph M Autry; Aleksey V Zima; Seth L Robia
Journal:  J Biol Chem       Date:  2018-05-15       Impact factor: 5.157

Review 5.  FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.

Authors:  Eitan Lerner; Anders Barth; Jelle Hendrix; Benjamin Ambrose; Victoria Birkedal; Scott C Blanchard; Richard Börner; Hoi Sung Chung; Thorben Cordes; Timothy D Craggs; Ashok A Deniz; Jiajie Diao; Jingyi Fei; Ruben L Gonzalez; Irina V Gopich; Taekjip Ha; Christian A Hanke; Gilad Haran; Nikos S Hatzakis; Sungchul Hohng; Seok-Cheol Hong; Thorsten Hugel; Antonino Ingargiola; Chirlmin Joo; Achillefs N Kapanidis; Harold D Kim; Ted Laurence; Nam Ki Lee; Tae-Hee Lee; Edward A Lemke; Emmanuel Margeat; Jens Michaelis; Xavier Michalet; Sua Myong; Daniel Nettels; Thomas-Otavio Peulen; Evelyn Ploetz; Yair Razvag; Nicole C Robb; Benjamin Schuler; Hamid Soleimaninejad; Chun Tang; Reza Vafabakhsh; Don C Lamb; Claus Am Seidel; Shimon Weiss
Journal:  Elife       Date:  2021-03-29       Impact factor: 8.140

6.  Characterization of the kinetic cycle of an ABC transporter by single-molecule and cryo-EM analyses.

Authors:  Ling Wang; Zachary Lee Johnson; Michael R Wasserman; Jesper Levring; Jue Chen; Shixin Liu
Journal:  Elife       Date:  2020-05-27       Impact factor: 8.140

7.  Conformational dynamics of the ABC transporter McjD seen by single-molecule FRET.

Authors:  Florence Husada; Kiran Bountra; Konstantinos Tassis; Marijn de Boer; Maria Romano; Sylvie Rebuffat; Konstantinos Beis; Thorben Cordes
Journal:  EMBO J       Date:  2018-09-20       Impact factor: 11.598

8.  A Mn-sensing riboswitch activates expression of a Mn2+/Ca2+ ATPase transporter in Streptococcus.

Authors:  Julia E Martin; My T Le; Nabin Bhattarai; Daiana A Capdevila; Jiangchuan Shen; Malcolm E Winkler; David P Giedroc
Journal:  Nucleic Acids Res       Date:  2019-07-26       Impact factor: 16.971

Review 9.  Primary Active Ca2+ Transport Systems in Health and Disease.

Authors:  M Rosario Sepúlveda; Peter Vangheluwe; Jialin Chen; Aljona Sitsel; Veronick Benoy
Journal:  Cold Spring Harb Perspect Biol       Date:  2020-02-03       Impact factor: 10.005

10.  Angle change of the A-domain in a single SERCA1a molecule detected by defocused orientation imaging.

Authors:  Takanobu A Katoh; Takashi Daiho; Kazuo Yamasaki; Stefania Danko; Shoko Fujimura; Hiroshi Suzuki
Journal:  Sci Rep       Date:  2021-07-01       Impact factor: 4.379

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