Literature DB >> 29141426

The magnitude of the intrinsic rate constant: How deep can association reactions be in the diffusion limited regime?

Adithya Vijaykumar1, Pieter Rein Ten Wolde1, Peter G Bolhuis2.   

Abstract

Intrinsic and effective rate constants have an important role in the theory of diffusion-limited reactions. In a previous paper, we provide detailed microscopic expressions for these intrinsic rates [A. Vijaykumar, P. G. Bolhuis, and P. R. ten Wolde, Faraday Discuss. 195, 421 (2016)], which are usually considered as abstract quantities and assumed to be implicitly known. Using these microscopic expressions, we investigate how the rate of association depends on the strength and the range of the isotropic potential and the strength of the non-specific attraction in case of the anisotropic potential. In addition, we determine the location of the interface where these expressions become valid for anisotropic potentials. In particular, by investigating the particles' orientational distributions, we verify whether the interface at which these distributions become isotropic agrees with the interface predicted by the effective association rate constant. Finally, we discuss how large the intrinsic association rate can become, and what are the consequences for the existence of the diffusion limited regime.

Year:  2017        PMID: 29141426     DOI: 10.1063/1.5009547

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Multisite reversible association in membranes and solutions: From non-Markovian to Markovian kinetics.

Authors:  Irina V Gopich
Journal:  J Chem Phys       Date:  2020-03-14       Impact factor: 3.488

2.  Particle-Based Simulation Reveals Macromolecular Crowding Effects on the Michaelis-Menten Mechanism.

Authors:  Daniel R Weilandt; Vassily Hatzimanikatis
Journal:  Biophys J       Date:  2019-06-25       Impact factor: 4.033

  2 in total

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