Literature DB >> 29140476

Corrigendum: Identification of multiple genomic DNA sequences which form i-motif structures at neutral pH.

Elisé P Wright1, Julian L Huppert2, Zöe A E Waller1,3.   

Abstract

Entities:  

Year:  2017        PMID: 29140476      PMCID: PMC5728391          DOI: 10.1093/nar/gkx1178

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


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Nucleic Acids Research (2017) 45(6) 2951–2959, https://doi.org/10.1093/nar/gkx090 The authors wish to make the following correction to their article: The last column of Table 2, pHT, is not in the correct order. A new table is provided below and the table has been corrected in the published article.
Table 2.

Thermal and pH stability of the genomic i-motif candidate oligonucleotides used in this study

pH 7.0
NotationBasesSequence 5′ - 3′ T m1/Tm2 T a pHT
AC017019.128CCC-CCC-TCC-CCC-CCT-CCC-CCC-TCC-CCC-C27.9 ± 0.618.0 ± 0.27.1
AC018878.326CCC-CCA-CCC-CCA-GCC-CCC-TTT-CCC-CC18.1 ± 0.27.5 ± 0.57.1
ATXN2L24CCC-CCC-CCC-CCC-CCC-CCC-CCC-CCC23.7 ± 1.022.5 ± 0.67.0
CAMK2G50CCC-CCA-GGC-CCC-GCC-AGT-CCC-CCC-CCC-CGC-CCG-GCC-CCC-GGC-CCG-CCC-CC13.0 ± 1.211.3 ± 0.76.9
DAP29CCC-CCG-CCC-CCG-CCC-CCG-CCC-CCG-CCC-CC24.7 ± 0.522.0 ± 0.47.0
DRP270CCC-CCT-CTT-CCC-CTC-TCC-CCC-TCT-CCC-CCT-CTC-TCC-CTC-TTC-CCC-CTC-TCC-TTG-TCT-CCTTCT-CTC-CCC-C4.5 ± 0.76.5 ± 0.76.0
DUX4L2241CCC-CCG-AAA-CGC-GCC-CCC-CTC-CCC-CCT-CCC-CCC-TCT-CCC-CC29.2 ± 0.214.2 ± 0.27.1
GH242CCC-CCA-CCC-CCA-CCC-CCA-TCC-CCA-CGC-CCC-GCC-CCC-GCC-CCC22.7 ± 1.015.2 ± 0.97.1
HIC274CCC-CCG-GGA-CAG-GGA-CCC-TGG-CCC-CCC-CCG-ACA-GGC-TGA-CGC-CCA-CCC-CCT-CAA-ACT-CTG-GTG-GAC-TTA-CCC-CC7.5 ± 2.17.8 ± 2.06.4
HOXC1024CCC-CCA-CCC-CCA-CCC-CCA-CCC-CCC17.7 ± 0.814.0 ± 0.27.1
HOXD1026CCC-CCC-CCC-CCT-CCC-CCG-CGG-CCC-CC10.2 ± 0.95.2 ± 0.27.1
JAZF131CCC-CCC-CCG-CCC-CCG-CCC-CCG-CCC-TCC-CCC-C20.4 ± 0.418.5 ± 0.67.1
MSMO123CCC-CCG-CCC-CCG-CCC-CCG-CCC-CC16.6 ± 0.515.9 ± 0.46.7
NFATC145CCC-CCG-TTT-CCC-CCG-CCA-GCC-CCA-GCG-CCC-CCC-TGC-CCG-GCC-CCC23.2 ± 0.0/28.8 ± 0.518.8 ± 0.67.1
PIM145CCC-CCG-ACG-CGC-CCC-CCA-ACA-CAC-AAA-CCC-CCA-GAA-TCC-GCC-CCC29.4 ± 1.95.1 ± 0.27.0
PLCB236CCC-CCG-CCT-CTT-CTG-GAG-GCC-CCC-GCC-CCC-ACC-CCC15.0 ± 0.213.2 ± 0.27.0
QSOX125CCC-CCG-CCC-CCG-AGC-CCC-CGC-CCC-C20.1 ± 0.211.9 ± 0.47.1
RAE1116CCC-CCC-GCC-CCC-CCC-GCC-CCC-CCG-CGC-CGC-CCC-CCC-CCG-CCC-CCC-GCC-CCC-GTC-CCC-CCG-CCC-CCC-CCG-CCC-CCC-CCG-CCC-CCC-GTC-CCC-CCG-CCC-CCC-CGC-CCC-CCC-GTC-CCC-CC27.1 ± 7.413.6 ± 6.36.8
RUNX1–131CCC-CCC-CCG-CAC-CCC-TTC-CCC-CGG-CCC-CCC-C14.3 ± 0.9/25.0 ± 0.49.8 ± 0.46.7
RUNX1–236CCC-CCC-TCC-CCC-TGC-CTC-TCC-CTC-CCC-CCT-TTC-CCC13.2 ± 0.2/24.4 ± 0.210.1 ± 0.06.5
RUNX1–332CCC-CCC-TTT-CCC-CTG-CCC-CCC-CTG-CCT-CCC-CC10.7 ± 0.6/26.2 ± 0.09.7 ± 0.66.7
SHANK1b28CCC-CCC-TCC-CCC-CAC-CCC-CCA-CCC-CCC-C22.5 ± 0.612.0 ± 0.07.1
SHANK380CCC-CCG-CCT-CCG-GCG-CAG-CCC-CCT-CGC-CAC-CCC-CGC-TTC-CCT-CCC-GTC-TCA-GGC-CCC-CTC-CCC-CCG-CCG-CCC-CCG-CCC-CC18.3 ± 1.95.6 ± 1.06.6
SHANK3b79CCC-CCC-GCA-CCG-AGG-CCT-AGG-ACT-CCC-CCC-CCC-AAC-CCC-GTC-ACA-GCC-CCC-CAG-ACC-CCC-GCC-CCG-TGG-CTC-GGC-CCC-C12.6 ± 3.64.8 ± 0.76.5
SNORD11236CCC-CCC-CCC-GCC-CCC-CAC-CCC-CCC-ACC-CCC-CCC-CCC25.8 ± 0.515.9 ± 0.47.2
SOX157CCC-CCT-GCA-GGC-CCC-CCT-GCG-CCT-CCC-CCC-CCC-CGC-CAC-TGG-CGC-CTG-GCT-TCC-CCC9.0 ± 0.26.5 ± 0.56.9
STX1733CCC-CCG-CCC-CCG-CCC-CCG-CCC-CGC-AGG-GCC-CCC19.5 ± 0.615.0 ± 0.27.0
Tandem Repeat (LA16c-OS12.2)57CCC-CCC-GTG-TCG-CTG-TTC-CCC-CCG-TGT-CGC-TGT-TCC-CCC-CGT-GTC-GCT-GTT-CCC-CCC9.4 ± 1.5/31.6 ± 0.66.7 ± 0.66.6
TRABD23CCC-CCG-CCC-CCC-CCC-CCC-CCC-CC21.3 ± 0.219.3 ± 0.26.9
WNT7A48CCC-CCG-CCC-CTC-CCT-CCT-TTC-CCC-CGT-CCC-TCC-CCC-GCC-CCC-TCC-CCC22.7 ± 2.516.1 ± 0.07.1
ZBTB7B58CCC-CCC-ATC-CCT-CCC-CTC-CCT-CCC-CCC-GCC-CCT-GCC-ACC-CCC-CAA-ACT-CCC-CCC-CCC-C25.5 ± 1.310.0 ± 0.27.1
ZFP4152CCC-CCA-GCC-CCC-GCC-GAC-CCC-CAG-CTC-CCG-CCT-CCG-CCG-ACC-CCC-AGC-CCC-C21.7 ± 0.7/35.6 ± 0.417.4 ± 0.47.0
ZNF48023CCC-CCG-CCC-CCG-CCC-CCG-CCC-CC17.1 ± 0.015.2 ± 0.26.7
The mistake does not affect the overall conclusions of the work.
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