Literature DB >> 29137996

Mitochondrial genome of Diaphania indica(saunders) (Lepidoptera: Pyraloidea) and implications for its phylogeny.

Li-Shang Dai1, Xu-Dong Zhou2, Saima Kausar3, Muhammad Nadeem Abbas3, Liang Wu2, Hai-Ling Zhou2.   

Abstract

The cucumber moth, Diaphania indica (Saunders) (Lepipdoptera: Pyralidae) is an economically important insect pest of cucurbits and is widely distributed in tropical and sub-tropical regions. Herein, we obtained entire mitochondrial genome (mitogenome) sequence of D. indica using polymerase chain reaction amplification and sequencing method. The complete mitogenome of D. indica is 15,367bp long, including 13 protein coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs) and an A+T rich element. Both the AT skew and GC skew are slightly negative in the newly sequenced mitogenome. All of the 12 PCGs initiate with canonical start codon (ATN), except for coxI that initiate with CGA. The A+T rich element of D. indica is 467bp long and contains many features common to Pyraloidea insects. In addition, we reconstructed phylogenetic relationships among the eight superfamiles of lepidopterans by employing Neighbor joining (NJ) and Maximum likelihood (ML) methods, and both yielded identical topologies. The phylogeny results supported the monophyly of lepidopteran superfamilies. Furthermore, phylogenetic tree showed that D. indica belongs to the Pyraloidea superfamily.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Diaphania indica; Genome; Lepidoptera; Mitochondrial phylogeny; Pyraloidea

Mesh:

Substances:

Year:  2017        PMID: 29137996     DOI: 10.1016/j.ijbiomac.2017.11.011

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  8 in total

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Review 2.  Multiple Stressors in Vegetable Production: Insights for Trait-Based Crop Improvement in Cucurbits.

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Journal:  Mitochondrial DNA B Resour       Date:  2020-02-03       Impact factor: 0.658

7.  Complete mitochondrial genome of Cerace xanthocosma and its phylogenetic position in the family Tortricidae.

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Journal:  Mitochondrial DNA B Resour       Date:  2020-07-20       Impact factor: 0.658

8.  Novel gene rearrangement in the mitochondrial genome of Anastatus fulloi (Hymenoptera Chalcidoidea) and phylogenetic implications for Chalcidoidea.

Authors:  Jiequn Yi; Han Wu; Jianbai Liu; Jihu Li; Yinglin Lu; Yifei Zhang; Yinjie Cheng; Yi Guo; Dunsong Li; Yuxing An
Journal:  Sci Rep       Date:  2022-01-25       Impact factor: 4.996

  8 in total

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