Literature DB >> 29130189

Identifying the m6A Methylome by Affinity Purification and Sequencing.

Phillip J Hsu1,2,3, Chuan He4,5,6.   

Abstract

N 6-methyladenosine (m6A) is the most abundant internal modification in eukaryotic mRNA, and is newly emerging as a key posttranscriptional mRNA regulator. Recent research has uncovered insight into the location and function of m6A sites on a large scale, in part due to the transcriptome-wide identification of m6A sites by high-throughput sequencing (m6A-seq). Here, we present a protocol for m6A-seq, which maps the m6A methylome by affinity purification and sequencing.

Entities:  

Keywords:  Affinity purification; Methylome; N 6-methyladenosine; Sequencing; Transcriptome

Mesh:

Substances:

Year:  2018        PMID: 29130189     DOI: 10.1007/978-1-4939-7213-5_3

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  6 in total

1.  Acute Deletion of METTL14 in β-Cells of Adult Mice Results in Glucose Intolerance.

Authors:  Lili Men; Juan Sun; Guanzheng Luo; Decheng Ren
Journal:  Endocrinology       Date:  2019-10-01       Impact factor: 4.736

2.  Control of Early B Cell Development by the RNA N6-Methyladenosine Methylation.

Authors:  Zhong Zheng; Linda Zhang; Xiao-Long Cui; Xianbin Yu; Phillip J Hsu; Ruitu Lyu; Haiyan Tan; Malay Mandal; Michelle Zhang; Hui-Lung Sun; Arantxa Sanchez Castillo; Junmin Peng; Marcus R Clark; Chuan He; Haochu Huang
Journal:  Cell Rep       Date:  2020-06-30       Impact factor: 9.423

3.  Collateral Damage Occurs When Using Photosensitizer Probes to Detect or Modulate Nucleic Acid Modifications.

Authors:  Aaron M Fleming; Michael B Chabot; Ngoc L B Nguyen; Cynthia J Burrows
Journal:  Angew Chem Int Ed Engl       Date:  2021-12-29       Impact factor: 15.336

4.  A New Model of Spontaneous Colitis in Mice Induced by Deletion of an RNA m6A Methyltransferase Component METTL14 in T Cells.

Authors:  Thomas X Lu; Zhong Zheng; Linda Zhang; Hui-Lung Sun; Marc Bissonnette; Haochu Huang; Chuan He
Journal:  Cell Mol Gastroenterol Hepatol       Date:  2020-07-04

5.  Nanopore Dwell Time Analysis Permits Sequencing and Conformational Assignment of Pseudouridine in SARS-CoV-2.

Authors:  Aaron M Fleming; Nicole J Mathewson; Shereen A Howpay Manage; Cynthia J Burrows
Journal:  ACS Cent Sci       Date:  2021-09-15       Impact factor: 14.553

Review 6.  Function and evolution of RNA N6-methyladenosine modification.

Authors:  Zhi-Man Zhu; Fu-Chun Huo; Dong-Sheng Pei
Journal:  Int J Biol Sci       Date:  2020-04-15       Impact factor: 6.580

  6 in total

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